RNA–Protein interactions for RNA: ENST00000584186.1

CDK5RAP3-233, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 482 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-233ENST00000584186 CPA4Q9UI42 421 aa16.6■□□□□ 0.25
CDK5RAP3-233ENST00000584186 PTPN22Q9Y2R2 807 aa16.6■□□□□ 0.25
CDK5RAP3-233ENST00000584186 RAB11FIP3O75154 756 aa16.59■□□□□ 0.25
CDK5RAP3-233ENST00000584186 KIF22Q14807 665 aa16.59■□□□□ 0.25
CDK5RAP3-233ENST00000584186 SLC4A8Q2Y0W8 1093 aa16.59■□□□□ 0.25
CDK5RAP3-233ENST00000584186 DNAJC2Q99543 621 aaKnown RBP16.59■□□□□ 0.25
CDK5RAP3-233ENST00000584186 TRIM34Q9BYJ4 488 aa16.59■□□□□ 0.25
CDK5RAP3-233ENST00000584186 DHX36Q9H2U1 1008 aaKnown RBP16.59■□□□□ 0.25
CDK5RAP3-233ENST00000584186 PI4KBQ9UBF8 816 aa16.59■□□□□ 0.25
CDK5RAP3-233ENST00000584186 AFG3L2Q9Y4W6 797 aa16.59■□□□□ 0.25
CDK5RAP3-233ENST00000584186 FLT1P17948 1338 aa16.59■□□□□ 0.25
CDK5RAP3-233ENST00000584186 COL2A1P02458 1487 aaPredicted RBP16.59■□□□□ 0.25
CDK5RAP3-233ENST00000584186 MYO5AQ9Y4I1 1855 aaKnown RBP16.59■□□□□ 0.25
CDK5RAP3-233ENST00000584186 TNRC18O15417 2968 aaPredicted RBP16.58■□□□□ 0.24
CDK5RAP3-233ENST00000584186 A0A0G2JLL6 359 aaPredicted RBP16.58■□□□□ 0.24
CDK5RAP3-233ENST00000584186 IGSF3O75054 1194 aa16.58■□□□□ 0.24
CDK5RAP3-233ENST00000584186 GPAT2Q6NUI2 795 aa16.58■□□□□ 0.24
CDK5RAP3-233ENST00000584186 FASTKD5Q7L8L6 764 aaKnown RBP16.58■□□□□ 0.24
CDK5RAP3-233ENST00000584186 PRRT2Q7Z6L0 340 aaPredicted RBP16.58■□□□□ 0.24
CDK5RAP3-233ENST00000584186 CRACR2BQ8N4Y2 399 aaPredicted RBP16.58■□□□□ 0.24
CDK5RAP3-233ENST00000584186 ARHGAP39Q9C0H5 1083 aa16.58■□□□□ 0.24
CDK5RAP3-233ENST00000584186 HERC5Q9UII4 1024 aaKnown RBP16.58■□□□□ 0.24
CDK5RAP3-233ENST00000584186 PALD1Q9ULE6 856 aa16.58■□□□□ 0.24
CDK5RAP3-233ENST00000584186 GOLIM4O00461 696 aa16.57■□□□□ 0.24
CDK5RAP3-233ENST00000584186 CYP2C8P10632 490 aa16.57■□□□□ 0.24
CDK5RAP3-233ENST00000584186 USP5P45974 858 aa16.57■□□□□ 0.24
CDK5RAP3-233ENST00000584186 LACTBP83111 547 aaPredicted RBP16.57■□□□□ 0.24
CDK5RAP3-233ENST00000584186 TTF1Q15361 905 aaPredicted RBP16.57■□□□□ 0.24
CDK5RAP3-233ENST00000584186 PARK7Q99497 189 aaKnown RBP16.57■□□□□ 0.24
CDK5RAP3-233ENST00000584186 DOCK1Q14185 1865 aa16.56■□□□□ 0.24
CDK5RAP3-233ENST00000584186 CAP2P40123 477 aa16.56■□□□□ 0.24
CDK5RAP3-233ENST00000584186 RRP1BQ14684 758 aaKnown RBP16.56■□□□□ 0.24
CDK5RAP3-233ENST00000584186 C17orf99Q6UX52 265 aa16.56■□□□□ 0.24
CDK5RAP3-233ENST00000584186 YTHDC1Q96MU7 727 aaKnown RBP16.56■□□□□ 0.24
CDK5RAP3-233ENST00000584186 HLA-DOAP06340 250 aa16.55■□□□□ 0.24
CDK5RAP3-233ENST00000584186 SPP2Q13103 211 aa16.55■□□□□ 0.24
CDK5RAP3-233ENST00000584186 SLC9C2Q5TAH2 1124 aa16.55■□□□□ 0.24
CDK5RAP3-233ENST00000584186 PTCH2Q9Y6C5 1203 aa16.55■□□□□ 0.24
CDK5RAP3-233ENST00000584186 MAGEB6P1A0A0J9YX57 407 aa16.54■□□□□ 0.24
CDK5RAP3-233ENST00000584186 SMARCA5O60264 1052 aaPredicted RBP16.54■□□□□ 0.24
CDK5RAP3-233ENST00000584186 PDE6AP16499 860 aa16.54■□□□□ 0.24
CDK5RAP3-233ENST00000584186 PSMC4P43686 418 aa16.54■□□□□ 0.24
CDK5RAP3-233ENST00000584186 CERS3Q8IU89 383 aa16.54■□□□□ 0.24
CDK5RAP3-233ENST00000584186 FOXP4Q8IVH2 680 aaPredicted RBP16.54■□□□□ 0.24
CDK5RAP3-233ENST00000584186 ZNF280CQ8ND82 737 aa16.54■□□□□ 0.24
CDK5RAP3-233ENST00000584186 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.54■□□□□ 0.24
CDK5RAP3-233ENST00000584186 EDC3Q96F86 508 aaKnown RBP16.54■□□□□ 0.24
CDK5RAP3-233ENST00000584186 LRRCC1Q9C099 1032 aa16.54■□□□□ 0.24
CDK5RAP3-233ENST00000584186 BOLA2Q9H3K6 86 aa16.54■□□□□ 0.24
CDK5RAP3-233ENST00000584186 ADGRA2Q96PE1 1338 aa16.53■□□□□ 0.24
CDK5RAP3-233ENST00000584186 USP17L5A8MUK1 530 aa16.53■□□□□ 0.24
CDK5RAP3-233ENST00000584186 GDF11O95390 407 aa16.53■□□□□ 0.24
CDK5RAP3-233ENST00000584186 FMNL1O95466 1100 aaPredicted RBP16.53■□□□□ 0.24
CDK5RAP3-233ENST00000584186 MYCP01106 439 aaPredicted RBP16.53■□□□□ 0.24
CDK5RAP3-233ENST00000584186 SLC9C1Q4G0N8 1177 aa16.53■□□□□ 0.24
CDK5RAP3-233ENST00000584186 SMCR8Q8TEV9 937 aaPredicted RBP16.53■□□□□ 0.24
CDK5RAP3-233ENST00000584186 DNAJC18Q9H819 358 aa16.53■□□□□ 0.24
CDK5RAP3-233ENST00000584186 ZNF532Q9HCE3 1301 aa16.52■□□□□ 0.24
CDK5RAP3-233ENST00000584186 HMGCS2P54868 508 aa16.52■□□□□ 0.24
CDK5RAP3-233ENST00000584186 SHROOM1Q2M3G4 852 aaPredicted RBP16.52■□□□□ 0.24
CDK5RAP3-233ENST00000584186 TREML2Q5T2D2 321 aa16.52■□□□□ 0.24
CDK5RAP3-233ENST00000584186 TMED8Q6PL24 325 aaPredicted RBP16.52■□□□□ 0.24
CDK5RAP3-233ENST00000584186 TRIM47Q96LD4 638 aa16.52■□□□□ 0.24
CDK5RAP3-233ENST00000584186 AS3MTQ9HBK9 375 aa16.52■□□□□ 0.24
CDK5RAP3-233ENST00000584186 PAG1Q9NWQ8 432 aa16.52■□□□□ 0.24
CDK5RAP3-233ENST00000584186 AGTPBP1Q9UPW5 1226 aa16.52■□□□□ 0.24
CDK5RAP3-233ENST00000584186 CDK5RAP2Q96SN8 1893 aa16.52■□□□□ 0.23
CDK5RAP3-233ENST00000584186 ZSWIM8A7E2V4 1837 aa16.52■□□□□ 0.23
CDK5RAP3-233ENST00000584186 PHIPQ8WWQ0 1821 aa16.52■□□□□ 0.23
CDK5RAP3-233ENST00000584186 GNRH1P01148 92 aa16.51■□□□□ 0.23
CDK5RAP3-233ENST00000584186 ASNSP08243 561 aa16.51■□□□□ 0.23
CDK5RAP3-233ENST00000584186 ATP5JP18859 108 aa16.51■□□□□ 0.23
CDK5RAP3-233ENST00000584186 CTGFP29279 349 aa16.51■□□□□ 0.23
CDK5RAP3-233ENST00000584186 JAG1P78504 1218 aa16.51■□□□□ 0.23
CDK5RAP3-233ENST00000584186 NBPF11Q86T75 865 aa16.51■□□□□ 0.23
CDK5RAP3-233ENST00000584186 ARMC5Q96C12 935 aa16.51■□□□□ 0.23
CDK5RAP3-233ENST00000584186 RIOK1Q9BRS2 568 aaKnown RBP16.51■□□□□ 0.23
CDK5RAP3-233ENST00000584186 TBC1D2Q9BYX2 928 aa16.51■□□□□ 0.23
CDK5RAP3-233ENST00000584186 SLC45A1Q9Y2W3 748 aa16.51■□□□□ 0.23
CDK5RAP3-233ENST00000584186 FOCADQ5VW36 1801 aa16.51■□□□□ 0.23
CDK5RAP3-233ENST00000584186 SIPA1L1O43166 1804 aa16.5■□□□□ 0.23
CDK5RAP3-233ENST00000584186 ATAD5Q96QE3 1844 aa16.5■□□□□ 0.23
CDK5RAP3-233ENST00000584186 POTEFA5A3E0 1075 aa16.5■□□□□ 0.23
CDK5RAP3-233ENST00000584186 BCRP11274 1271 aa16.5■□□□□ 0.23
CDK5RAP3-233ENST00000584186 OSBPP22059 807 aa16.5■□□□□ 0.23
CDK5RAP3-233ENST00000584186 MTMR2Q13614 643 aa16.5■□□□□ 0.23
CDK5RAP3-233ENST00000584186 TTC6Q86TZ1 520 aa16.5■□□□□ 0.23
CDK5RAP3-233ENST00000584186 METTL16Q86W50 562 aaKnown RBP16.5■□□□□ 0.23
CDK5RAP3-233ENST00000584186 SH3TC2Q8TF17 1288 aa16.5■□□□□ 0.23
CDK5RAP3-233ENST00000584186 HAUS7Q99871 368 aa16.5■□□□□ 0.23
CDK5RAP3-233ENST00000584186 CRNKL1Q9BZJ0 848 aaKnown RBP16.5■□□□□ 0.23
CDK5RAP3-233ENST00000584186 SERPINB13Q9UIV8 391 aa16.5■□□□□ 0.23
CDK5RAP3-233ENST00000584186 PNMA3Q9UL41 463 aa16.5■□□□□ 0.23
CDK5RAP3-233ENST00000584186 BRCA2P51587 3418 aa16.5■□□□□ 0.23
CDK5RAP3-233ENST00000584186 POLR3DP05423 398 aaPredicted RBP16.49■□□□□ 0.23
CDK5RAP3-233ENST00000584186 HOXD10P28358 340 aa16.49■□□□□ 0.23
CDK5RAP3-233ENST00000584186 PRMT2P55345 433 aa16.49■□□□□ 0.23
CDK5RAP3-233ENST00000584186 FCGRTP55899 365 aa16.49■□□□□ 0.23
CDK5RAP3-233ENST00000584186 SLFNL1Q499Z3 407 aa16.49■□□□□ 0.23
CDK5RAP3-233ENST00000584186 PROCA1Q8NCQ7 364 aaPredicted RBP16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms