RNA–Protein interactions for RNA: ENST00000583988.1

PPP4R1-227, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-227ENST00000583988 TRIM37O94972 964 aa6.64□□□□□ -1.35
PPP4R1-227ENST00000583988 SCARA3Q6AZY7 606 aa6.64□□□□□ -1.35
PPP4R1-227ENST00000583988 ARHGAP27Q6ZUM4 889 aa6.64□□□□□ -1.35
PPP4R1-227ENST00000583988 PLD6Q8N2A8 252 aaKnown RBP6.64□□□□□ -1.35
PPP4R1-227ENST00000583988 TOP6BLQ8N6T0 577 aa6.64□□□□□ -1.35
PPP4R1-227ENST00000583988 DUSP23Q9BVJ7 150 aa6.64□□□□□ -1.35
PPP4R1-227ENST00000583988 KRTAP9-2Q9BYQ4 174 aa6.64□□□□□ -1.35
PPP4R1-227ENST00000583988 BACH2Q9BYV9 841 aa6.64□□□□□ -1.35
PPP4R1-227ENST00000583988 CACNA2D2Q9NY47 1150 aa6.64□□□□□ -1.35
PPP4R1-227ENST00000583988 ADGRE2Q9UHX3 823 aa6.64□□□□□ -1.35
PPP4R1-227ENST00000583988 CYP8B1Q9UNU6 501 aa6.64□□□□□ -1.35
PPP4R1-227ENST00000583988 UNCXA6NJT0 531 aa6.63□□□□□ -1.35
PPP4R1-227ENST00000583988 RLBP1P12271 317 aa6.63□□□□□ -1.35
PPP4R1-227ENST00000583988 RBM25P49756 843 aaKnown RBP6.63□□□□□ -1.35
PPP4R1-227ENST00000583988 ELMO3Q96BJ8 720 aa6.63□□□□□ -1.35
PPP4R1-227ENST00000583988 PAK6Q9NQU5 681 aaPredicted RBP6.63□□□□□ -1.35
PPP4R1-227ENST00000583988 SLC5A6Q9Y289 635 aa6.63□□□□□ -1.35
PPP4R1-227ENST00000583988 RPS26P62854 115 aaKnown RBP6.62□□□□□ -1.35
PPP4R1-227ENST00000583988 ZNF574Q6ZN55 896 aaPredicted RBP6.62□□□□□ -1.35
PPP4R1-227ENST00000583988 CDC37L1Q7L3B6 337 aa6.62□□□□□ -1.35
PPP4R1-227ENST00000583988 UBE3DQ7Z6J8 389 aa6.62□□□□□ -1.35
PPP4R1-227ENST00000583988 NETO1Q8TDF5 533 aa6.62□□□□□ -1.35
PPP4R1-227ENST00000583988 BCL7CQ8WUZ0 217 aaPredicted RBP6.62□□□□□ -1.35
PPP4R1-227ENST00000583988 METTL5Q9NRN9 209 aaKnown RBP6.62□□□□□ -1.35
PPP4R1-227ENST00000583988 KIAA1522Q9P206 1035 aaPredicted RBP6.62□□□□□ -1.35
PPP4R1-227ENST00000583988 U3KQE9 123 aa6.62□□□□□ -1.35
PPP4R1-227ENST00000583988 PRAMEF27A3QJZ7 478 aa6.61□□□□□ -1.35
PPP4R1-227ENST00000583988 BNIP3Q12983 259 aa6.61□□□□□ -1.35
PPP4R1-227ENST00000583988 TTBK2Q6IQ55 1244 aa6.61□□□□□ -1.35
PPP4R1-227ENST00000583988 NPM2Q86SE8 214 aaKnown RBP6.61□□□□□ -1.35
PPP4R1-227ENST00000583988 TMEM87AQ8NBN3 555 aa6.61□□□□□ -1.35
PPP4R1-227ENST00000583988 AGBL5Q8NDL9 886 aa6.61□□□□□ -1.35
PPP4R1-227ENST00000583988 RSRP1Q9BUV0 290 aa6.61□□□□□ -1.35
PPP4R1-227ENST00000583988 KRTAP9-6A0A140TA67 174 aa6.6□□□□□ -1.35
PPP4R1-227ENST00000583988 FANCGO15287 622 aa6.6□□□□□ -1.35
PPP4R1-227ENST00000583988 ITIH2P19823 946 aa6.6□□□□□ -1.35
PPP4R1-227ENST00000583988 NTF4P34130 210 aa6.6□□□□□ -1.35
PPP4R1-227ENST00000583988 PTPN11Q06124 597 aaPredicted RBP6.6□□□□□ -1.35
PPP4R1-227ENST00000583988 INPP5AQ14642 412 aa6.6□□□□□ -1.35
PPP4R1-227ENST00000583988 ZBTB37Q5TC79 503 aa6.6□□□□□ -1.35
PPP4R1-227ENST00000583988 LRFN4Q6PJG9 635 aa6.6□□□□□ -1.35
PPP4R1-227ENST00000583988 AGMOQ6ZNB7 445 aa6.6□□□□□ -1.35
PPP4R1-227ENST00000583988 SPRED2Q7Z698 418 aa6.6□□□□□ -1.35
PPP4R1-227ENST00000583988 SCAMP3O14828 347 aaKnown RBP6.59□□□□□ -1.35
PPP4R1-227ENST00000583988 RECKO95980 971 aa6.59□□□□□ -1.35
PPP4R1-227ENST00000583988 LMNB1P20700 586 aa6.59□□□□□ -1.35
PPP4R1-227ENST00000583988 CD96P40200 585 aa6.59□□□□□ -1.35
PPP4R1-227ENST00000583988 LIG3P49916 1009 aa6.59□□□□□ -1.35
PPP4R1-227ENST00000583988 RING1Q06587 406 aa6.59□□□□□ -1.35
PPP4R1-227ENST00000583988 PLCL1Q15111 1095 aa6.59□□□□□ -1.35
PPP4R1-227ENST00000583988 MAP3K11Q16584 847 aa6.59□□□□□ -1.35
PPP4R1-227ENST00000583988 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.59□□□□□ -1.35
PPP4R1-227ENST00000583988 STK11IPQ8N1F8 1099 aa6.59□□□□□ -1.35
PPP4R1-227ENST00000583988 ZNF428Q96B54 188 aa6.59□□□□□ -1.35
PPP4R1-227ENST00000583988 PLPPR2Q96GM1 343 aa6.59□□□□□ -1.35
PPP4R1-227ENST00000583988 PRDM10Q9NQV6 1147 aa6.59□□□□□ -1.35
PPP4R1-227ENST00000583988 RNF114Q9Y508 228 aa6.59□□□□□ -1.35
PPP4R1-227ENST00000583988 CEACAM5P06731 702 aa6.58□□□□□ -1.36
PPP4R1-227ENST00000583988 OXCT1P55809 520 aa6.58□□□□□ -1.36
PPP4R1-227ENST00000583988 PWP1Q13610 501 aa6.58□□□□□ -1.36
PPP4R1-227ENST00000583988 IFI16Q16666 785 aaKnown RBP6.58□□□□□ -1.36
PPP4R1-227ENST00000583988 TSNAXIP1Q2TAA8 658 aa6.58□□□□□ -1.36
PPP4R1-227ENST00000583988 ERMP1Q7Z2K6 904 aa6.58□□□□□ -1.36
PPP4R1-227ENST00000583988 HDXQ7Z353 690 aa6.58□□□□□ -1.36
PPP4R1-227ENST00000583988 RELL1Q8IUW5 271 aa6.58□□□□□ -1.36
PPP4R1-227ENST00000583988 PHC3Q8NDX5 983 aa6.58□□□□□ -1.36
PPP4R1-227ENST00000583988 GAL3ST3Q96A11 431 aa6.58□□□□□ -1.36
PPP4R1-227ENST00000583988 MISP3Q96FF7 219 aa6.58□□□□□ -1.36
PPP4R1-227ENST00000583988 HEXIM2Q96MH2 286 aaKnown RBP6.58□□□□□ -1.36
PPP4R1-227ENST00000583988 CD8BP10966 210 aa6.57□□□□□ -1.36
PPP4R1-227ENST00000583988 TFE3P19532 575 aaPredicted RBP6.57□□□□□ -1.36
PPP4R1-227ENST00000583988 CDK8P49336 464 aa6.57□□□□□ -1.36
PPP4R1-227ENST00000583988 AOC3Q16853 763 aa6.57□□□□□ -1.36
PPP4R1-227ENST00000583988 CBLL1Q75N03 491 aa6.57□□□□□ -1.36
PPP4R1-227ENST00000583988 ARMCX6Q7L4S7 300 aa6.57□□□□□ -1.36
PPP4R1-227ENST00000583988 KCT2Q8NC54 265 aa6.57□□□□□ -1.36
PPP4R1-227ENST00000583988 ZNF507Q8TCN5 953 aa6.57□□□□□ -1.36
PPP4R1-227ENST00000583988 HRASLS5Q96KN8 279 aa6.57□□□□□ -1.36
PPP4R1-227ENST00000583988 TMEM74Q96NL1 305 aa6.57□□□□□ -1.36
PPP4R1-227ENST00000583988 MKNK2Q9HBH9 465 aa6.57□□□□□ -1.36
PPP4R1-227ENST00000583988 GTF2IRD1Q9UHL9 959 aa6.57□□□□□ -1.36
PPP4R1-227ENST00000583988 PLAGL2Q9UPG8 496 aa6.57□□□□□ -1.36
PPP4R1-227ENST00000583988 TLR6Q9Y2C9 796 aa6.57□□□□□ -1.36
PPP4R1-227ENST00000583988 PCDHB5Q9Y5E4 795 aa6.57□□□□□ -1.36
PPP4R1-227ENST00000583988 ETF1P62495 437 aaKnown RBP6.56□□□□□ -1.36
PPP4R1-227ENST00000583988 FANCCQ00597 558 aa6.56□□□□□ -1.36
PPP4R1-227ENST00000583988 SEPT6Q14141 434 aa6.56□□□□□ -1.36
PPP4R1-227ENST00000583988 WIPI1Q5MNZ9 446 aaPredicted RBP6.56□□□□□ -1.36
PPP4R1-227ENST00000583988 HS2ST1Q7LGA3 356 aa6.56□□□□□ -1.36
PPP4R1-227ENST00000583988 WFDC3Q8IUB2 231 aa6.56□□□□□ -1.36
PPP4R1-227ENST00000583988 FBRSQ9HAH7 460 aa6.56□□□□□ -1.36
PPP4R1-227ENST00000583988 IGSF5Q9NSI5 407 aa6.56□□□□□ -1.36
PPP4R1-227ENST00000583988 VAV3Q9UKW4 847 aa6.56□□□□□ -1.36
PPP4R1-227ENST00000583988 TMEM265A0A087WTH1 108 aa6.55□□□□□ -1.36
PPP4R1-227ENST00000583988 ZNF76P36508 570 aa6.55□□□□□ -1.36
PPP4R1-227ENST00000583988 TXKP42681 527 aa6.55□□□□□ -1.36
PPP4R1-227ENST00000583988 PRKCQQ04759 706 aa6.55□□□□□ -1.36
PPP4R1-227ENST00000583988 ZNF792Q3KQV3 632 aa6.55□□□□□ -1.36
PPP4R1-227ENST00000583988 CYFIP1Q7L576 1253 aa6.55□□□□□ -1.36
PPP4R1-227ENST00000583988 CCDC84Q86UT8 332 aaPredicted RBP6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms