RNA–Protein interactions for RNA: ENST00000583879.5

VAPA-207, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 719 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-207ENST00000583879 FAM205AQ6ZU69 1335 aa6.76□□□□□ -1.33
VAPA-207ENST00000583879 CCL15-CCL14A0A0B4J2E2 113 aa6.76□□□□□ -1.33
VAPA-207ENST00000583879 TCP10L2B9ZVM9 353 aa6.76□□□□□ -1.33
VAPA-207ENST00000583879 TLR2O60603 784 aa6.76□□□□□ -1.33
VAPA-207ENST00000583879 VAMP4O75379 141 aa6.76□□□□□ -1.33
VAPA-207ENST00000583879 WDHD1O75717 1129 aaPredicted RBP6.76□□□□□ -1.33
VAPA-207ENST00000583879 HIBADHP31937 336 aaKnown RBP6.76□□□□□ -1.33
VAPA-207ENST00000583879 TNNI2P48788 182 aa6.76□□□□□ -1.33
VAPA-207ENST00000583879 UBE4AQ14139 1066 aa6.76□□□□□ -1.33
VAPA-207ENST00000583879 CCL15Q16663 113 aa6.76□□□□□ -1.33
VAPA-207ENST00000583879 CCDC57Q2TAC2 916 aa6.76□□□□□ -1.33
VAPA-207ENST00000583879 EPHA10Q5JZY3 1008 aa6.76□□□□□ -1.33
VAPA-207ENST00000583879 MFSD14BQ5SR56 506 aa6.76□□□□□ -1.33
VAPA-207ENST00000583879 BEND3Q5T5X7 828 aa6.76□□□□□ -1.33
VAPA-207ENST00000583879 DZIP1LQ8IYY4 767 aaKnown RBP6.76□□□□□ -1.33
VAPA-207ENST00000583879 FAM43AQ8N2R8 423 aa6.76□□□□□ -1.33
VAPA-207ENST00000583879 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.76□□□□□ -1.33
VAPA-207ENST00000583879 ZNF594Q96JF6 807 aaPredicted RBP6.76□□□□□ -1.33
VAPA-207ENST00000583879 FAM84BQ96KN1 310 aaPredicted RBP6.76□□□□□ -1.33
VAPA-207ENST00000583879 CSADQ9Y600 493 aa6.76□□□□□ -1.33
VAPA-207ENST00000583879 PSME4Q14997 1843 aa6.76□□□□□ -1.33
VAPA-207ENST00000583879 SPDYE5A6NIY4 337 aa6.75□□□□□ -1.33
VAPA-207ENST00000583879 H0YGN5 161 aa6.75□□□□□ -1.33
VAPA-207ENST00000583879 MYCP01106 439 aaPredicted RBP6.75□□□□□ -1.33
VAPA-207ENST00000583879 GNRH1P01148 92 aa6.75□□□□□ -1.33
VAPA-207ENST00000583879 CETPP11597 493 aa6.75□□□□□ -1.33
VAPA-207ENST00000583879 CRKP46108 304 aa6.75□□□□□ -1.33
VAPA-207ENST00000583879 GYG1P46976 350 aa6.75□□□□□ -1.33
VAPA-207ENST00000583879 PRMT2P55345 433 aa6.75□□□□□ -1.33
VAPA-207ENST00000583879 LACTBP83111 547 aaPredicted RBP6.75□□□□□ -1.33
VAPA-207ENST00000583879 VGLL4Q14135 290 aa6.75□□□□□ -1.33
VAPA-207ENST00000583879 KIF22Q14807 665 aa6.75□□□□□ -1.33
VAPA-207ENST00000583879 TAF7LQ5H9L4 462 aa6.75□□□□□ -1.33
VAPA-207ENST00000583879 LCE2AQ5TA79 106 aaPredicted RBP6.75□□□□□ -1.33
VAPA-207ENST00000583879 ERO1BQ86YB8 467 aa6.75□□□□□ -1.33
VAPA-207ENST00000583879 SPSB2Q99619 263 aa6.75□□□□□ -1.33
VAPA-207ENST00000583879 MRIQ9BWK5 157 aa6.75□□□□□ -1.33
VAPA-207ENST00000583879 TMEM39BQ9GZU3 492 aa6.75□□□□□ -1.33
VAPA-207ENST00000583879 ZCCHC17Q9NP64 241 aaKnown RBP6.75□□□□□ -1.33
VAPA-207ENST00000583879 CNNM1Q9NRU3 951 aa6.75□□□□□ -1.33
VAPA-207ENST00000583879 PKD2L1Q9P0L9 805 aa6.75□□□□□ -1.33
VAPA-207ENST00000583879 IL16Q14005 1332 aa6.75□□□□□ -1.33
VAPA-207ENST00000583879 HTTP42858 3142 aa6.74□□□□□ -1.33
VAPA-207ENST00000583879 BTBD19C9JJ37 291 aa6.74□□□□□ -1.33
VAPA-207ENST00000583879 F6X3S4 739 aa6.74□□□□□ -1.33
VAPA-207ENST00000583879 GRM8O00222 908 aa6.74□□□□□ -1.33
VAPA-207ENST00000583879 HDLBPQ00341 1268 aaKnown RBP6.74□□□□□ -1.33
VAPA-207ENST00000583879 FBXO33Q7Z6M2 555 aa6.74□□□□□ -1.33
VAPA-207ENST00000583879 CRIPAKQ8N1N5 446 aa6.74□□□□□ -1.33
VAPA-207ENST00000583879 SH3TC2Q8TF17 1288 aa6.74□□□□□ -1.33
VAPA-207ENST00000583879 ARHGAP39Q9C0H5 1083 aa6.74□□□□□ -1.33
VAPA-207ENST00000583879 C9orf78Q9NZ63 289 aaPredicted RBP6.74□□□□□ -1.33
VAPA-207ENST00000583879 CENPFP49454 3210 aa6.73□□□□□ -1.33
VAPA-207ENST00000583879 IRF6O14896 467 aa6.73□□□□□ -1.33
VAPA-207ENST00000583879 CD2BP2O95400 341 aaKnown RBP6.73□□□□□ -1.33
VAPA-207ENST00000583879 HOXD10P28358 340 aa6.73□□□□□ -1.33
VAPA-207ENST00000583879 RPIAP49247 311 aa6.73□□□□□ -1.33
VAPA-207ENST00000583879 PPATQ06203 517 aa6.73□□□□□ -1.33
VAPA-207ENST00000583879 SNAPC2Q13487 334 aa6.73□□□□□ -1.33
VAPA-207ENST00000583879 GRIK5Q16478 980 aa6.73□□□□□ -1.33
VAPA-207ENST00000583879 PUS10Q3MIT2 529 aaKnown RBP6.73□□□□□ -1.33
VAPA-207ENST00000583879 C17orf99Q6UX52 265 aa6.73□□□□□ -1.33
VAPA-207ENST00000583879 FAM83AQ86UY5 434 aa6.73□□□□□ -1.33
VAPA-207ENST00000583879 TBC1D22AQ8WUA7 517 aa6.73□□□□□ -1.33
VAPA-207ENST00000583879 DPF3Q92784 378 aa6.73□□□□□ -1.33
VAPA-207ENST00000583879 ZKSCAN4Q969J2 545 aaPredicted RBP6.73□□□□□ -1.33
VAPA-207ENST00000583879 HOOK2Q96ED9 719 aa6.73□□□□□ -1.33
VAPA-207ENST00000583879 ZDHHC15Q96MV8 337 aa6.73□□□□□ -1.33
VAPA-207ENST00000583879 PUS3Q9BZE2 481 aaKnown RBP6.73□□□□□ -1.33
VAPA-207ENST00000583879 RIPOR2Q9Y4F9 1068 aa6.73□□□□□ -1.33
VAPA-207ENST00000583879 SNCAIPQ9Y6H5 919 aa6.73□□□□□ -1.33
VAPA-207ENST00000583879 BRCA2P51587 3418 aa6.73□□□□□ -1.33
VAPA-207ENST00000583879 MROH5Q6ZUA9 1318 aa6.73□□□□□ -1.33
VAPA-207ENST00000583879 ZNF646O15015 1829 aaPredicted RBP6.72□□□□□ -1.33
VAPA-207ENST00000583879 AXIN1O15169 862 aa6.72□□□□□ -1.33
VAPA-207ENST00000583879 FRAT2O75474 233 aaPredicted RBP6.72□□□□□ -1.33
VAPA-207ENST00000583879 ALDH1L1O75891 902 aa6.72□□□□□ -1.33
VAPA-207ENST00000583879 WFS1O76024 890 aa6.72□□□□□ -1.33
VAPA-207ENST00000583879 OATP04181 439 aa6.72□□□□□ -1.33
VAPA-207ENST00000583879 CTGFP29279 349 aa6.72□□□□□ -1.33
VAPA-207ENST00000583879 PSMC4P43686 418 aa6.72□□□□□ -1.33
VAPA-207ENST00000583879 GJA8P48165 433 aa6.72□□□□□ -1.33
VAPA-207ENST00000583879 CACNB3P54284 484 aa6.72□□□□□ -1.33
VAPA-207ENST00000583879 EXOSC9Q06265 439 aaKnown RBP6.72□□□□□ -1.33
VAPA-207ENST00000583879 PPIL2Q13356 520 aa6.72□□□□□ -1.33
VAPA-207ENST00000583879 MTFR1Q15390 333 aa6.72□□□□□ -1.33
VAPA-207ENST00000583879 CCDC184Q52MB2 194 aa6.72□□□□□ -1.33
VAPA-207ENST00000583879 CAVIN4Q5BKX8 364 aa6.72□□□□□ -1.33
VAPA-207ENST00000583879 FKBP1CQ5VVH2 108 aa6.72□□□□□ -1.33
VAPA-207ENST00000583879 APOBEC3HQ6NTF7 200 aaKnown RBP6.72□□□□□ -1.33
VAPA-207ENST00000583879 MIGA2Q7L4E1 593 aa6.72□□□□□ -1.33
VAPA-207ENST00000583879 VPS37DQ86XT2 251 aa6.72□□□□□ -1.33
VAPA-207ENST00000583879 WDR63Q8IWG1 891 aa6.72□□□□□ -1.33
VAPA-207ENST00000583879 CYP4X1Q8N118 509 aa6.72□□□□□ -1.33
VAPA-207ENST00000583879 TEKT1Q969V4 418 aa6.72□□□□□ -1.33
VAPA-207ENST00000583879 KAZALD1Q96I82 304 aa6.72□□□□□ -1.33
VAPA-207ENST00000583879 WRNIP1Q96S55 665 aa6.72□□□□□ -1.33
VAPA-207ENST00000583879 SRRDQ9UH36 339 aa6.72□□□□□ -1.33
VAPA-207ENST00000583879 FANCIQ9NVI1 1328 aa6.72□□□□□ -1.33
VAPA-207ENST00000583879 PDHXO00330 501 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms