RNA–Protein interactions for RNA: ENST00000583577.1

MKS1-212, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-212ENST00000583577 PPIL2Q13356 520 aa11.92□□□□□ -0.5
MKS1-212ENST00000583577 SPDYE2Q495Y8 402 aa11.92□□□□□ -0.5
MKS1-212ENST00000583577 ANKRD23Q86SG2 305 aa11.92□□□□□ -0.5
MKS1-212ENST00000583577 RPAP2Q8IXW5 612 aaPredicted RBP11.92□□□□□ -0.5
MKS1-212ENST00000583577 ANKRD44Q8N8A2 993 aa11.92□□□□□ -0.5
MKS1-212ENST00000583577 ANKLE1Q8NAG6 615 aa11.92□□□□□ -0.5
MKS1-212ENST00000583577 WRNIP1Q96S55 665 aa11.92□□□□□ -0.5
MKS1-212ENST00000583577 SLKQ9H2G2 1235 aaPredicted RBP11.92□□□□□ -0.5
MKS1-212ENST00000583577 SEMA6BQ9H3T3 888 aa11.92□□□□□ -0.5
MKS1-212ENST00000583577 CD209Q9NNX6 404 aa11.92□□□□□ -0.5
MKS1-212ENST00000583577 COL2A1P02458 1487 aaPredicted RBP11.91□□□□□ -0.5
MKS1-212ENST00000583577 KCNJ4P48050 445 aa11.91□□□□□ -0.5
MKS1-212ENST00000583577 PXYLP1Q8TE99 480 aa11.91□□□□□ -0.5
MKS1-212ENST00000583577 GOLGA6L22H0YM25 854 aa11.9□□□□□ -0.5
MKS1-212ENST00000583577 CDC45O75419 566 aa11.9□□□□□ -0.5
MKS1-212ENST00000583577 CYP2C8P10632 490 aa11.9□□□□□ -0.5
MKS1-212ENST00000583577 BCRP11274 1271 aa11.9□□□□□ -0.5
MKS1-212ENST00000583577 CASC1Q6TDU7 716 aa11.9□□□□□ -0.5
MKS1-212ENST00000583577 LDHAL6AQ6ZMR3 332 aa11.9□□□□□ -0.5
MKS1-212ENST00000583577 ZNF594Q96JF6 807 aaPredicted RBP11.9□□□□□ -0.5
MKS1-212ENST00000583577 CNNM1Q9NRU3 951 aa11.9□□□□□ -0.5
MKS1-212ENST00000583577 TNPO2O14787 897 aaKnown RBP11.89□□□□□ -0.51
MKS1-212ENST00000583577 TNNI2P48788 182 aa11.89□□□□□ -0.51
MKS1-212ENST00000583577 PARK7Q99497 189 aaKnown RBP11.89□□□□□ -0.51
MKS1-212ENST00000583577 ANKRD2Q9GZV1 360 aa11.89□□□□□ -0.51
MKS1-212ENST00000583577 BRPF3Q9ULD4 1205 aa11.89□□□□□ -0.51
MKS1-212ENST00000583577 MYH13Q9UKX3 1938 aa11.89□□□□□ -0.51
MKS1-212ENST00000583577 EPB41L2O43491 1005 aaKnown RBP11.88□□□□□ -0.51
MKS1-212ENST00000583577 TRAK2O60296 914 aa11.88□□□□□ -0.51
MKS1-212ENST00000583577 PPATQ06203 517 aa11.88□□□□□ -0.51
MKS1-212ENST00000583577 IRF5Q13568 498 aa11.88□□□□□ -0.51
MKS1-212ENST00000583577 RAB3GAP1Q15042 981 aa11.88□□□□□ -0.51
MKS1-212ENST00000583577 RABEP1Q15276 862 aa11.88□□□□□ -0.51
MKS1-212ENST00000583577 LBHD1Q9BQE6 289 aaPredicted RBP11.88□□□□□ -0.51
MKS1-212ENST00000583577 DCTPP1Q9H773 170 aa11.88□□□□□ -0.51
MKS1-212ENST00000583577 K7ELQ4 463 aaPredicted RBP11.87□□□□□ -0.51
MKS1-212ENST00000583577 SNAP23O00161 211 aa11.87□□□□□ -0.51
MKS1-212ENST00000583577 SRGAP3O43295 1099 aa11.87□□□□□ -0.51
MKS1-212ENST00000583577 CHRNDQ07001 517 aa11.87□□□□□ -0.51
MKS1-212ENST00000583577 MTX1Q13505 466 aa11.87□□□□□ -0.51
MKS1-212ENST00000583577 USP38Q8NB14 1042 aa11.87□□□□□ -0.51
MKS1-212ENST00000583577 TTYH1Q9H313 450 aaPredicted RBP11.87□□□□□ -0.51
MKS1-212ENST00000583577 CWC22Q9HCG8 908 aaKnown RBP11.87□□□□□ -0.51
MKS1-212ENST00000583577 PFASO15067 1338 aa11.86□□□□□ -0.51
MKS1-212ENST00000583577 RFX5P48382 616 aaPredicted RBP11.86□□□□□ -0.51
MKS1-212ENST00000583577 CACNB3P54284 484 aa11.86□□□□□ -0.51
MKS1-212ENST00000583577 NUCB2P80303 420 aa11.86□□□□□ -0.51
MKS1-212ENST00000583577 ANKRD45Q5TZF3 282 aa11.86□□□□□ -0.51
MKS1-212ENST00000583577 KLHDC4Q8TBB5 520 aa11.86□□□□□ -0.51
MKS1-212ENST00000583577 PUS3Q9BZE2 481 aaKnown RBP11.86□□□□□ -0.51
MKS1-212ENST00000583577 LNPKQ9C0E8 428 aa11.86□□□□□ -0.51
MKS1-212ENST00000583577 C1orf115Q9H7X2 142 aa11.86□□□□□ -0.51
MKS1-212ENST00000583577 FBXO3Q9UK99 471 aa11.86□□□□□ -0.51
MKS1-212ENST00000583577 TTF2Q9UNY4 1162 aaKnown RBP11.86□□□□□ -0.51
MKS1-212ENST00000583577 MROH5Q6ZUA9 1318 aa11.86□□□□□ -0.51
MKS1-212ENST00000583577 EYA2O00167 538 aa11.85□□□□□ -0.51
MKS1-212ENST00000583577 HMMRO75330 724 aa11.85□□□□□ -0.51
MKS1-212ENST00000583577 INPP5BP32019 993 aa11.85□□□□□ -0.51
MKS1-212ENST00000583577 FKBP1AP62942 108 aaKnown RBP11.85□□□□□ -0.51
MKS1-212ENST00000583577 ATP8B2P98198 1209 aa11.85□□□□□ -0.51
MKS1-212ENST00000583577 TRIM32Q13049 653 aa11.85□□□□□ -0.51
MKS1-212ENST00000583577 MOGSQ13724 837 aa11.85□□□□□ -0.51
MKS1-212ENST00000583577 LRRC26Q2I0M4 334 aa11.85□□□□□ -0.51
MKS1-212ENST00000583577 LRRC24Q50LG9 513 aa11.85□□□□□ -0.51
MKS1-212ENST00000583577 METTL24Q5JXM2 366 aa11.85□□□□□ -0.51
MKS1-212ENST00000583577 ZNF804AQ7Z570 1209 aa11.85□□□□□ -0.51
MKS1-212ENST00000583577 COA7Q96BR5 231 aa11.85□□□□□ -0.51
MKS1-212ENST00000583577 SIL1Q9H173 461 aa11.85□□□□□ -0.51
MKS1-212ENST00000583577 HMX1Q9NP08 348 aaPredicted RBP11.85□□□□□ -0.51
MKS1-212ENST00000583577 PTPRFP10586 1907 aa11.85□□□□□ -0.51
MKS1-212ENST00000583577 SYNGAP1Q96PV0 1343 aa11.85□□□□□ -0.51
MKS1-212ENST00000583577 PNMA6EA0A0J9YXQ4 647 aa11.84□□□□□ -0.51
MKS1-212ENST00000583577 TAF5LO75529 589 aa11.84□□□□□ -0.51
MKS1-212ENST00000583577 HMGCRP04035 888 aa11.84□□□□□ -0.51
MKS1-212ENST00000583577 IL1R1P14778 569 aa11.84□□□□□ -0.51
MKS1-212ENST00000583577 GPAT2Q6NUI2 795 aa11.84□□□□□ -0.51
MKS1-212ENST00000583577 MIGA2Q7L4E1 593 aa11.84□□□□□ -0.51
MKS1-212ENST00000583577 ADAMTS19Q8TE59 1207 aa11.84□□□□□ -0.51
MKS1-212ENST00000583577 COPRSQ9NQ92 184 aa11.84□□□□□ -0.51
MKS1-212ENST00000583577 SERPINA10Q9UK55 444 aa11.84□□□□□ -0.51
MKS1-212ENST00000583577 OGDHLQ9ULD0 1010 aa11.84□□□□□ -0.51
MKS1-212ENST00000583577 KCNH4Q9UQ05 1017 aa11.84□□□□□ -0.51
MKS1-212ENST00000583577 PA2G4Q9UQ80 394 aaKnown RBP11.84□□□□□ -0.51
MKS1-212ENST00000583577 LTBP2Q14767 1821 aa11.83□□□□□ -0.51
MKS1-212ENST00000583577 REV3LO60673 3130 aa11.83□□□□□ -0.52
MKS1-212ENST00000583577 CIAO1O76071 339 aa11.83□□□□□ -0.52
MKS1-212ENST00000583577 REC8O95072 547 aa11.83□□□□□ -0.52
MKS1-212ENST00000583577 IL15P40933 162 aaPredicted RBP11.83□□□□□ -0.52
MKS1-212ENST00000583577 CRKP46108 304 aa11.83□□□□□ -0.52
MKS1-212ENST00000583577 MCM2P49736 904 aa11.83□□□□□ -0.52
MKS1-212ENST00000583577 G3BP1Q13283 466 aaKnown RBP eCLIP11.83□□□□□ -0.52
MKS1-212ENST00000583577 UBE4AQ14139 1066 aa11.83□□□□□ -0.52
MKS1-212ENST00000583577 DCAF15Q66K64 600 aa11.83□□□□□ -0.52
MKS1-212ENST00000583577 TBC1D9Q6ZT07 1266 aa11.83□□□□□ -0.52
MKS1-212ENST00000583577 SSH3Q8TE77 659 aa11.83□□□□□ -0.52
MKS1-212ENST00000583577 PPM1EQ8WY54 764 aa11.83□□□□□ -0.52
MKS1-212ENST00000583577 SNX27Q96L92 541 aa11.83□□□□□ -0.52
MKS1-212ENST00000583577 ZNF341Q9BYN7 854 aa11.83□□□□□ -0.52
MKS1-212ENST00000583577 OSBPL3Q9H4L5 887 aa11.83□□□□□ -0.52
MKS1-212ENST00000583577 MAST2Q6P0Q8 1798 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms