RNA–Protein interactions for RNA: ENST00000583363.5

CDK5RAP3-228, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 558 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-228ENST00000583363 TCP10L2B9ZVM9 353 aa19.43■□□□□ 0.7
CDK5RAP3-228ENST00000583363 POLR3DP05423 398 aaPredicted RBP19.43■□□□□ 0.7
CDK5RAP3-228ENST00000583363 CYP2D6P10635 497 aa19.43■□□□□ 0.7
CDK5RAP3-228ENST00000583363 PPARAQ07869 468 aa19.43■□□□□ 0.7
CDK5RAP3-228ENST00000583363 TCP10Q12799 353 aa19.43■□□□□ 0.7
CDK5RAP3-228ENST00000583363 SAPCD2Q86UD0 394 aa19.43■□□□□ 0.7
CDK5RAP3-228ENST00000583363 FAM83AQ86UY5 434 aa19.43■□□□□ 0.7
CDK5RAP3-228ENST00000583363 FAM151AQ8WW52 585 aa19.43■□□□□ 0.7
CDK5RAP3-228ENST00000583363 KIF2CQ99661 725 aa19.43■□□□□ 0.7
CDK5RAP3-228ENST00000583363 BEGAINQ9BUH8 593 aa19.43■□□□□ 0.7
CDK5RAP3-228ENST00000583363 GLIS2Q9BZE0 524 aaPredicted RBP19.43■□□□□ 0.7
CDK5RAP3-228ENST00000583363 VEZTQ9HBM0 779 aa19.43■□□□□ 0.7
CDK5RAP3-228ENST00000583363 TAF6LQ9Y6J9 622 aa19.43■□□□□ 0.7
CDK5RAP3-228ENST00000583363 ASTN2O75129 1339 aaPredicted RBP19.43■□□□□ 0.7
CDK5RAP3-228ENST00000583363 CDK5RAP2Q96SN8 1893 aa19.43■□□□□ 0.7
CDK5RAP3-228ENST00000583363 ECM29Q5VYK3 1845 aa19.42■□□□□ 0.7
CDK5RAP3-228ENST00000583363 SMIM22K7EJ46 135 aa19.42■□□□□ 0.7
CDK5RAP3-228ENST00000583363 CELF2O95319 508 aaKnown RBP19.42■□□□□ 0.7
CDK5RAP3-228ENST00000583363 PLCD1P51178 756 aa19.42■□□□□ 0.7
CDK5RAP3-228ENST00000583363 NBPF3Q9H094 633 aa19.42■□□□□ 0.7
CDK5RAP3-228ENST00000583363 PGAP2Q9UHJ9 254 aa19.42■□□□□ 0.7
CDK5RAP3-228ENST00000583363 TSKSQ9UJT2 592 aa19.42■□□□□ 0.7
CDK5RAP3-228ENST00000583363 BAZ2AQ9UIF9 1905 aaKnown RBP19.41■□□□□ 0.7
CDK5RAP3-228ENST00000583363 MAP2K2P36507 400 aa19.41■□□□□ 0.7
CDK5RAP3-228ENST00000583363 EVX2Q03828 476 aa19.41■□□□□ 0.7
CDK5RAP3-228ENST00000583363 CTDSPL2Q05D32 466 aa19.41■□□□□ 0.7
CDK5RAP3-228ENST00000583363 SH3BP5LQ7L8J4 393 aa19.41■□□□□ 0.7
CDK5RAP3-228ENST00000583363 TTC6Q86TZ1 520 aa19.41■□□□□ 0.7
CDK5RAP3-228ENST00000583363 AMOTL1Q8IY63 956 aa19.41■□□□□ 0.7
CDK5RAP3-228ENST00000583363 DHX36Q9H2U1 1008 aaKnown RBP19.41■□□□□ 0.7
CDK5RAP3-228ENST00000583363 TSHZ2Q9NRE2 1034 aa19.41■□□□□ 0.7
CDK5RAP3-228ENST00000583363 FOCADQ5VW36 1801 aa19.4■□□□□ 0.7
CDK5RAP3-228ENST00000583363 DDTLA6NHG4 134 aaPredicted RBP19.4■□□□□ 0.7
CDK5RAP3-228ENST00000583363 E7EWF7 191 aa19.4■□□□□ 0.7
CDK5RAP3-228ENST00000583363 TNNI2P48788 182 aa19.4■□□□□ 0.7
CDK5RAP3-228ENST00000583363 KRT32Q14532 448 aa19.4■□□□□ 0.7
CDK5RAP3-228ENST00000583363 ANGEL2Q5VTE6 544 aaKnown RBP19.4■□□□□ 0.7
CDK5RAP3-228ENST00000583363 STOX1Q6ZVD7 989 aa19.4■□□□□ 0.7
CDK5RAP3-228ENST00000583363 TACC3Q9Y6A5 838 aa19.4■□□□□ 0.7
CDK5RAP3-228ENST00000583363 FGRP09769 529 aa19.39■□□□□ 0.69
CDK5RAP3-228ENST00000583363 TNFAIP1Q13829 316 aa19.39■□□□□ 0.69
CDK5RAP3-228ENST00000583363 ADCK5Q3MIX3 580 aa19.39■□□□□ 0.69
CDK5RAP3-228ENST00000583363 AKNAD1Q5T1N1 836 aa19.39■□□□□ 0.69
CDK5RAP3-228ENST00000583363 TBC1D10CQ8IV04 446 aa19.39■□□□□ 0.69
CDK5RAP3-228ENST00000583363 ZC3H15Q8WU90 426 aaKnown RBP19.39■□□□□ 0.69
CDK5RAP3-228ENST00000583363 STAG1Q8WVM7 1258 aa19.39■□□□□ 0.69
CDK5RAP3-228ENST00000583363 TM6SF1Q9BZW5 370 aa19.39■□□□□ 0.69
CDK5RAP3-228ENST00000583363 INCENPQ9NQS7 918 aa19.39■□□□□ 0.69
CDK5RAP3-228ENST00000583363 PI4KBQ9UBF8 816 aa19.39■□□□□ 0.69
CDK5RAP3-228ENST00000583363 SLC3A2P08195 630 aaKnown RBP19.38■□□□□ 0.69
CDK5RAP3-228ENST00000583363 MYH1P12882 1939 aa19.38■□□□□ 0.69
CDK5RAP3-228ENST00000583363 RASA3Q14644 834 aa19.38■□□□□ 0.69
CDK5RAP3-228ENST00000583363 SLC4A8Q2Y0W8 1093 aa19.38■□□□□ 0.69
CDK5RAP3-228ENST00000583363 ATRNL1Q5VV63 1379 aa19.38■□□□□ 0.69
CDK5RAP3-228ENST00000583363 MFSD6Q6ZSS7 791 aa19.38■□□□□ 0.69
CDK5RAP3-228ENST00000583363 APOBEC3FQ8IUX4 373 aaKnown RBP19.38■□□□□ 0.69
CDK5RAP3-228ENST00000583363 FOXP4Q8IVH2 680 aaPredicted RBP19.38■□□□□ 0.69
CDK5RAP3-228ENST00000583363 DYNLL2Q96FJ2 89 aa19.38■□□□□ 0.69
CDK5RAP3-228ENST00000583363 PITPNM2Q9BZ72 1349 aa19.38■□□□□ 0.69
CDK5RAP3-228ENST00000583363 ZNF408Q9H9D4 720 aa19.38■□□□□ 0.69
CDK5RAP3-228ENST00000583363 CASP8AP2Q9UKL3 1982 aa19.37■□□□□ 0.69
CDK5RAP3-228ENST00000583363 COL2A1P02458 1487 aaPredicted RBP19.37■□□□□ 0.69
CDK5RAP3-228ENST00000583363 HLA-DOAP06340 250 aa19.37■□□□□ 0.69
CDK5RAP3-228ENST00000583363 PCP11498 1178 aaKnown RBP19.37■□□□□ 0.69
CDK5RAP3-228ENST00000583363 PSMA5P28066 241 aa19.37■□□□□ 0.69
CDK5RAP3-228ENST00000583363 GABPAQ06546 454 aa19.37■□□□□ 0.69
CDK5RAP3-228ENST00000583363 METTL16Q86W50 562 aaKnown RBP19.37■□□□□ 0.69
CDK5RAP3-228ENST00000583363 ZSCAN29Q8IWY8 852 aaPredicted RBP19.37■□□□□ 0.69
CDK5RAP3-228ENST00000583363 STK11IPQ8N1F8 1099 aa19.37■□□□□ 0.69
CDK5RAP3-228ENST00000583363 HHIPL1Q96JK4 782 aa19.37■□□□□ 0.69
CDK5RAP3-228ENST00000583363 JAKMIP1Q96N16 626 aaKnown RBP19.37■□□□□ 0.69
CDK5RAP3-228ENST00000583363 NEK1Q96PY6 1258 aa19.37■□□□□ 0.69
CDK5RAP3-228ENST00000583363 TMEM39BQ9GZU3 492 aa19.37■□□□□ 0.69
CDK5RAP3-228ENST00000583363 DEFB129Q9H1M3 183 aa19.37■□□□□ 0.69
CDK5RAP3-228ENST00000583363 RNF41Q9H4P4 317 aaPredicted RBP19.37■□□□□ 0.69
CDK5RAP3-228ENST00000583363 ZSWIM6Q9HCJ5 1215 aa19.37■□□□□ 0.69
CDK5RAP3-228ENST00000583363 GGA3Q9NZ52 723 aa19.37■□□□□ 0.69
CDK5RAP3-228ENST00000583363 SCAF8Q9UPN6 1271 aaKnown RBP19.37■□□□□ 0.69
CDK5RAP3-228ENST00000583363 NAV1Q8NEY1 1877 aa19.37■□□□□ 0.69
CDK5RAP3-228ENST00000583363 CCDC85CA6NKD9 419 aa19.36■□□□□ 0.69
CDK5RAP3-228ENST00000583363 PDE4BQ07343 736 aa19.36■□□□□ 0.69
CDK5RAP3-228ENST00000583363 C16orf86Q6ZW13 317 aa19.36■□□□□ 0.69
CDK5RAP3-228ENST00000583363 CDC37L1Q7L3B6 337 aa19.36■□□□□ 0.69
CDK5RAP3-228ENST00000583363 DCPSQ96C86 337 aaKnown RBP19.36■□□□□ 0.69
CDK5RAP3-228ENST00000583363 TEPSINQ96N21 525 aa19.36■□□□□ 0.69
CDK5RAP3-228ENST00000583363 EHD4Q9H223 541 aa19.36■□□□□ 0.69
CDK5RAP3-228ENST00000583363 TAOK2Q9UL54 1235 aa19.36■□□□□ 0.69
CDK5RAP3-228ENST00000583363 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.36■□□□□ 0.69
CDK5RAP3-228ENST00000583363 ROBO3Q96MS0 1386 aa19.35■□□□□ 0.69
CDK5RAP3-228ENST00000583363 ORC4O43929 436 aa19.35■□□□□ 0.69
CDK5RAP3-228ENST00000583363 CDK8P49336 464 aa19.35■□□□□ 0.69
CDK5RAP3-228ENST00000583363 DLK2Q6UY11 383 aa19.35■□□□□ 0.69
CDK5RAP3-228ENST00000583363 NCOA7Q8NI08 942 aa19.35■□□□□ 0.69
CDK5RAP3-228ENST00000583363 CNNM2Q9H8M5 875 aa19.35■□□□□ 0.69
CDK5RAP3-228ENST00000583363 SERPINB13Q9UIV8 391 aa19.35■□□□□ 0.69
CDK5RAP3-228ENST00000583363 POLR2AP24928 1970 aaKnown RBP19.35■□□□□ 0.69
CDK5RAP3-228ENST00000583363 DDX60LQ5H9U9 1706 aaKnown RBP19.34■□□□□ 0.69
CDK5RAP3-228ENST00000583363 TRDNQ13061 729 aa19.34■□□□□ 0.69
CDK5RAP3-228ENST00000583363 RABEP1Q15276 862 aa19.34■□□□□ 0.69
CDK5RAP3-228ENST00000583363 NKX2-3Q8TAU0 364 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 1759.8 ms