RNA–Protein interactions for RNA: ENST00000582594.5

PPP4R1-222, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 1 (best)

Gene PPP4R1, Length 2,982 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-222ENST00000582594 RRP15Q9Y3B9 282 aaKnown RBP10.92□□□□□ -0.66
PPP4R1-222ENST00000582594 GOLGA8AA7E2F4 631 aa10.92□□□□□ -0.66
PPP4R1-222ENST00000582594 MAP2K7O14733 419 aa10.92□□□□□ -0.66
PPP4R1-222ENST00000582594 ZNF18P17022 549 aa10.92□□□□□ -0.66
PPP4R1-222ENST00000582594 ACTN2P35609 894 aa10.92□□□□□ -0.66
PPP4R1-222ENST00000582594 BRD3Q15059 726 aa10.92□□□□□ -0.66
PPP4R1-222ENST00000582594 BEND6Q5SZJ8 279 aaPredicted RBP10.92□□□□□ -0.66
PPP4R1-222ENST00000582594 APOA5Q6Q788 366 aa10.92□□□□□ -0.66
PPP4R1-222ENST00000582594 USP49Q70CQ1 688 aa10.92□□□□□ -0.66
PPP4R1-222ENST00000582594 CDC5LQ99459 802 aaKnown RBP10.92□□□□□ -0.66
PPP4R1-222ENST00000582594 ZNF330Q9Y3S2 320 aaPredicted RBP10.92□□□□□ -0.66
PPP4R1-222ENST00000582594 ANKRD65E5RJM6 399 aa10.92□□□□□ -0.66
PPP4R1-222ENST00000582594 SH2B2O14492 632 aaPredicted RBP10.92□□□□□ -0.66
PPP4R1-222ENST00000582594 GUCY1A2P33402 732 aa10.92□□□□□ -0.66
PPP4R1-222ENST00000582594 CPLX2Q6PUV4 134 aaKnown RBP10.92□□□□□ -0.66
PPP4R1-222ENST00000582594 LEKR1Q6ZMV7 388 aa10.92□□□□□ -0.66
PPP4R1-222ENST00000582594 CMTR1Q8N1G2 835 aaKnown RBP10.92□□□□□ -0.66
PPP4R1-222ENST00000582594 PLEKHA4Q9H4M7 779 aa10.92□□□□□ -0.66
PPP4R1-222ENST00000582594 ADGRG1Q9Y653 693 aa10.92□□□□□ -0.66
PPP4R1-222ENST00000582594 UBN2Q6ZU65 1347 aa10.91□□□□□ -0.66
PPP4R1-222ENST00000582594 FAM237AA0A1B0GTK4 181 aa10.91□□□□□ -0.66
PPP4R1-222ENST00000582594 ZBTB43O43298 467 aa10.91□□□□□ -0.66
PPP4R1-222ENST00000582594 KIF5CO60282 957 aa10.91□□□□□ -0.66
PPP4R1-222ENST00000582594 CDKL5O76039 1030 aa10.91□□□□□ -0.66
PPP4R1-222ENST00000582594 A1BGP04217 495 aa10.91□□□□□ -0.66
PPP4R1-222ENST00000582594 NR1I3Q14994 352 aa10.91□□□□□ -0.66
PPP4R1-222ENST00000582594 SRLQ86TD4 932 aa10.91□□□□□ -0.66
PPP4R1-222ENST00000582594 PPFIBP1Q86W92 1011 aa10.91□□□□□ -0.66
PPP4R1-222ENST00000582594 SLC35F6Q8N357 371 aa10.91□□□□□ -0.66
PPP4R1-222ENST00000582594 IGSF22Q8N9C0 903 aa10.91□□□□□ -0.66
PPP4R1-222ENST00000582594 ACRBPQ8NEB7 543 aa10.91□□□□□ -0.66
PPP4R1-222ENST00000582594 CCDC102AQ96A19 550 aa10.91□□□□□ -0.66
PPP4R1-222ENST00000582594 RNF216Q9NWF9 866 aaPredicted RBP10.91□□□□□ -0.66
PPP4R1-222ENST00000582594 CSB-PGBD3P0DP91 1061 aa10.91□□□□□ -0.66
PPP4R1-222ENST00000582594 AFMP43652 599 aa10.91□□□□□ -0.66
PPP4R1-222ENST00000582594 TOB1P50616 345 aaPredicted RBP10.91□□□□□ -0.66
PPP4R1-222ENST00000582594 CABP4P57796 275 aa10.91□□□□□ -0.66
PPP4R1-222ENST00000582594 SKIDA1Q1XH10 827 aa10.91□□□□□ -0.66
PPP4R1-222ENST00000582594 HDXQ7Z353 690 aa10.91□□□□□ -0.66
PPP4R1-222ENST00000582594 SMYD4Q8IYR2 804 aaPredicted RBP10.91□□□□□ -0.66
PPP4R1-222ENST00000582594 ENOX1Q8TC92 643 aaKnown RBP10.91□□□□□ -0.66
PPP4R1-222ENST00000582594 CDC23Q9UJX2 597 aa10.91□□□□□ -0.66
PPP4R1-222ENST00000582594 MYO1BO43795 1136 aa10.9□□□□□ -0.66
PPP4R1-222ENST00000582594 VSNL1P62760 191 aa10.9□□□□□ -0.66
PPP4R1-222ENST00000582594 MORC3Q14149 939 aa10.9□□□□□ -0.66
PPP4R1-222ENST00000582594 NUTM2AQ8IVF1 878 aaPredicted RBP10.9□□□□□ -0.66
PPP4R1-222ENST00000582594 IFNL2Q8IZJ0 200 aa10.9□□□□□ -0.66
PPP4R1-222ENST00000582594 HOOK1Q9UJC3 728 aaKnown RBP10.9□□□□□ -0.66
PPP4R1-222ENST00000582594 ZFYP08048 801 aaPredicted RBP10.9□□□□□ -0.66
PPP4R1-222ENST00000582594 CCDC57Q2TAC2 916 aa10.9□□□□□ -0.66
PPP4R1-222ENST00000582594 TAF7LQ5H9L4 462 aa10.9□□□□□ -0.66
PPP4R1-222ENST00000582594 TMEM67Q5HYA8 995 aa10.9□□□□□ -0.66
PPP4R1-222ENST00000582594 MLKLQ8NB16 471 aa10.9□□□□□ -0.66
PPP4R1-222ENST00000582594 RGS22Q8NE09 1264 aa10.9□□□□□ -0.66
PPP4R1-222ENST00000582594 FBXO41Q8TF61 875 aa10.9□□□□□ -0.66
PPP4R1-222ENST00000582594 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.9□□□□□ -0.66
PPP4R1-222ENST00000582594 FAM217BQ9NTX9 383 aaPredicted RBP10.9□□□□□ -0.66
PPP4R1-222ENST00000582594 PCDHB6Q9Y5E3 794 aa10.9□□□□□ -0.66
PPP4R1-222ENST00000582594 ECM29Q5VYK3 1845 aa10.9□□□□□ -0.67
PPP4R1-222ENST00000582594 SCN11AQ9UI33 1791 aa10.89□□□□□ -0.67
PPP4R1-222ENST00000582594 CYP27B1O15528 508 aa10.89□□□□□ -0.67
PPP4R1-222ENST00000582594 IDH1O75874 414 aaKnown RBP10.89□□□□□ -0.67
PPP4R1-222ENST00000582594 CASP14P31944 242 aa10.89□□□□□ -0.67
PPP4R1-222ENST00000582594 SSRP1Q08945 709 aaKnown RBP10.89□□□□□ -0.67
PPP4R1-222ENST00000582594 NR5A1Q13285 461 aa10.89□□□□□ -0.67
PPP4R1-222ENST00000582594 NTRK3Q16288 839 aa10.89□□□□□ -0.67
PPP4R1-222ENST00000582594 NOSTRINQ8IVI9 506 aa10.89□□□□□ -0.67
PPP4R1-222ENST00000582594 DIS3L2Q8IYB7 885 aaKnown RBP10.89□□□□□ -0.67
PPP4R1-222ENST00000582594 CEP112Q8N8E3 955 aa10.89□□□□□ -0.67
PPP4R1-222ENST00000582594 ZKSCAN3Q9BRR0 538 aa10.89□□□□□ -0.67
PPP4R1-222ENST00000582594 PSD3Q9NYI0 1048 aa10.89□□□□□ -0.67
PPP4R1-222ENST00000582594 DACH1Q9UI36 760 aa10.89□□□□□ -0.67
PPP4R1-222ENST00000582594 FBXO2Q9UK22 296 aaPredicted RBP10.89□□□□□ -0.67
PPP4R1-222ENST00000582594 CTDSPL2Q05D32 466 aa10.89□□□□□ -0.67
PPP4R1-222ENST00000582594 ATG3Q9NT62 314 aa10.89□□□□□ -0.67
PPP4R1-222ENST00000582594 A0A1B0GTH6 734 aa10.89□□□□□ -0.67
PPP4R1-222ENST00000582594 CTAGE9A4FU28 777 aa10.89□□□□□ -0.67
PPP4R1-222ENST00000582594 ERLIN1O75477 346 aa10.89□□□□□ -0.67
PPP4R1-222ENST00000582594 CD44P16070 742 aaKnown RBP10.89□□□□□ -0.67
PPP4R1-222ENST00000582594 CDC25AP30304 524 aa10.89□□□□□ -0.67
PPP4R1-222ENST00000582594 CCT6AP40227 531 aaKnown RBP10.89□□□□□ -0.67
PPP4R1-222ENST00000582594 PLCD1P51178 756 aa10.89□□□□□ -0.67
PPP4R1-222ENST00000582594 L1RE1Q9UN81 338 aa10.89□□□□□ -0.67
PPP4R1-222ENST00000582594 MYH8P13535 1937 aa10.88□□□□□ -0.67
PPP4R1-222ENST00000582594 MEGF6O75095 1541 aa10.88□□□□□ -0.67
PPP4R1-222ENST00000582594 MCAMP43121 646 aa10.88□□□□□ -0.67
PPP4R1-222ENST00000582594 SARSP49591 514 aaKnown RBP10.88□□□□□ -0.67
PPP4R1-222ENST00000582594 CASP8Q14790 479 aa10.88□□□□□ -0.67
PPP4R1-222ENST00000582594 RRP12Q5JTH9 1297 aaKnown RBP10.88□□□□□ -0.67
PPP4R1-222ENST00000582594 NCAPH2Q6IBW4 605 aa10.88□□□□□ -0.67
PPP4R1-222ENST00000582594 NOA1Q8NC60 698 aaKnown RBP10.88□□□□□ -0.67
PPP4R1-222ENST00000582594 STAMQ92783 540 aa10.88□□□□□ -0.67
PPP4R1-222ENST00000582594 PANX2Q96RD6 677 aa10.88□□□□□ -0.67
PPP4R1-222ENST00000582594 CSRNP2Q9H175 543 aa10.88□□□□□ -0.67
PPP4R1-222ENST00000582594 LY9Q9HBG7 655 aa10.88□□□□□ -0.67
PPP4R1-222ENST00000582594 TOMM22Q9NS69 142 aa10.88□□□□□ -0.67
PPP4R1-222ENST00000582594 IFIT3O14879 490 aaKnown RBP10.88□□□□□ -0.67
PPP4R1-222ENST00000582594 EIF3JO75822 258 aaKnown RBP10.88□□□□□ -0.67
PPP4R1-222ENST00000582594 FXR1P51114 621 aaKnown RBP eCLIP10.88□□□□□ -0.67
PPP4R1-222ENST00000582594 MSANTD4Q8NCY6 345 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms