RNA–Protein interactions for RNA: ENST00000582370.1

PDLIM1P3-201, Transcript of PDZ and LIM domain 1 pseudogene 3, humanhuman

BASIC

Gene PDLIM1P3, Length 599 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P3-201ENST00000582370 PRRT2Q7Z6L0 340 aaPredicted RBP10.71□□□□□ -0.69
PDLIM1P3-201ENST00000582370 SMCR8Q8TEV9 937 aaPredicted RBP10.71□□□□□ -0.69
PDLIM1P3-201ENST00000582370 MRIQ9BWK5 157 aa10.71□□□□□ -0.69
PDLIM1P3-201ENST00000582370 BICC1Q9H694 974 aaKnown RBP10.71□□□□□ -0.69
PDLIM1P3-201ENST00000582370 COPRSQ9NQ92 184 aa10.71□□□□□ -0.69
PDLIM1P3-201ENST00000582370 OGDHLQ9ULD0 1010 aa10.71□□□□□ -0.69
PDLIM1P3-201ENST00000582370 GTF3C3Q9Y5Q9 886 aa10.71□□□□□ -0.69
PDLIM1P3-201ENST00000582370 ATAD5Q96QE3 1844 aa10.7□□□□□ -0.7
PDLIM1P3-201ENST00000582370 CIAO1O76071 339 aa10.7□□□□□ -0.7
PDLIM1P3-201ENST00000582370 POLA2Q14181 598 aa10.7□□□□□ -0.7
PDLIM1P3-201ENST00000582370 TAF7LQ5H9L4 462 aa10.7□□□□□ -0.7
PDLIM1P3-201ENST00000582370 LMBR1LQ6UX01 489 aa10.7□□□□□ -0.7
PDLIM1P3-201ENST00000582370 FAM151AQ8WW52 585 aa10.7□□□□□ -0.7
PDLIM1P3-201ENST00000582370 SUCLG2Q96I99 432 aa10.7□□□□□ -0.7
PDLIM1P3-201ENST00000582370 FAM84BQ96KN1 310 aaPredicted RBP10.7□□□□□ -0.7
PDLIM1P3-201ENST00000582370 CDX2Q99626 313 aaPredicted RBP10.7□□□□□ -0.7
PDLIM1P3-201ENST00000582370 DCTPP1Q9H773 170 aa10.7□□□□□ -0.7
PDLIM1P3-201ENST00000582370 NOP58Q9Y2X3 529 aaKnown RBP10.7□□□□□ -0.7
PDLIM1P3-201ENST00000582370 TNFRSF10AO00220 468 aa10.69□□□□□ -0.7
PDLIM1P3-201ENST00000582370 COL6A1P12109 1028 aa10.69□□□□□ -0.7
PDLIM1P3-201ENST00000582370 GYG1P46976 350 aa10.69□□□□□ -0.7
PDLIM1P3-201ENST00000582370 MDM2Q00987 491 aaPredicted RBP10.69□□□□□ -0.7
PDLIM1P3-201ENST00000582370 GRIK5Q16478 980 aa10.69□□□□□ -0.7
PDLIM1P3-201ENST00000582370 FAM110CQ1W6H9 321 aa10.69□□□□□ -0.7
PDLIM1P3-201ENST00000582370 APOBEC3HQ6NTF7 200 aaKnown RBP10.69□□□□□ -0.7
PDLIM1P3-201ENST00000582370 LDHAL6AQ6ZMR3 332 aa10.69□□□□□ -0.7
PDLIM1P3-201ENST00000582370 KAZALD1Q96I82 304 aa10.69□□□□□ -0.7
PDLIM1P3-201ENST00000582370 CNNM1Q9NRU3 951 aa10.69□□□□□ -0.7
PDLIM1P3-201ENST00000582370 CHMP3Q9Y3E7 222 aa10.69□□□□□ -0.7
PDLIM1P3-201ENST00000582370 IL15P40933 162 aaPredicted RBP10.68□□□□□ -0.7
PDLIM1P3-201ENST00000582370 G3BP1Q13283 466 aaKnown RBP eCLIP10.68□□□□□ -0.7
PDLIM1P3-201ENST00000582370 TJAP1Q5JTD0 557 aa10.68□□□□□ -0.7
PDLIM1P3-201ENST00000582370 GADL1Q6ZQY3 521 aa10.68□□□□□ -0.7
PDLIM1P3-201ENST00000582370 SMC5Q8IY18 1101 aa10.68□□□□□ -0.7
PDLIM1P3-201ENST00000582370 FAM122AQ96E09 287 aa10.68□□□□□ -0.7
PDLIM1P3-201ENST00000582370 PNMA3Q9UL41 463 aa10.68□□□□□ -0.7
PDLIM1P3-201ENST00000582370 SUGT1Q9Y2Z0 365 aa10.68□□□□□ -0.7
PDLIM1P3-201ENST00000582370 PCDHB15Q9Y5E8 787 aa10.68□□□□□ -0.7
PDLIM1P3-201ENST00000582370 MROH5Q6ZUA9 1318 aa10.67□□□□□ -0.7
PDLIM1P3-201ENST00000582370 HHIPL2Q6UWX4 724 aa10.67□□□□□ -0.7
PDLIM1P3-201ENST00000582370 VPS37DQ86XT2 251 aa10.67□□□□□ -0.7
PDLIM1P3-201ENST00000582370 SCYL3Q8IZE3 742 aa10.67□□□□□ -0.7
PDLIM1P3-201ENST00000582370 ANKRD13CQ8N6S4 541 aa10.67□□□□□ -0.7
PDLIM1P3-201ENST00000582370 KIF1BPQ96EK5 621 aa10.67□□□□□ -0.7
PDLIM1P3-201ENST00000582370 LBHD1Q9BQE6 289 aaPredicted RBP10.67□□□□□ -0.7
PDLIM1P3-201ENST00000582370 PICK1Q9NRD5 415 aa10.67□□□□□ -0.7
PDLIM1P3-201ENST00000582370 AKAP2Q9Y2D5 859 aa10.67□□□□□ -0.7
PDLIM1P3-201ENST00000582370 NCOR1O75376 2440 aa10.67□□□□□ -0.7
PDLIM1P3-201ENST00000582370 RLFQ13129 1914 aa10.66□□□□□ -0.7
PDLIM1P3-201ENST00000582370 MYH2Q9UKX2 1941 aa10.66□□□□□ -0.7
PDLIM1P3-201ENST00000582370 FRAT2O75474 233 aaPredicted RBP10.66□□□□□ -0.7
PDLIM1P3-201ENST00000582370 SURF6O75683 361 aaKnown RBP10.66□□□□□ -0.7
PDLIM1P3-201ENST00000582370 FOSL2P15408 326 aa10.66□□□□□ -0.7
PDLIM1P3-201ENST00000582370 HOXD11P31277 338 aaPredicted RBP10.66□□□□□ -0.7
PDLIM1P3-201ENST00000582370 CHAF1AQ13111 956 aaPredicted RBP10.66□□□□□ -0.7
PDLIM1P3-201ENST00000582370 OS9Q13438 667 aaPredicted RBP10.66□□□□□ -0.7
PDLIM1P3-201ENST00000582370 LRRC26Q2I0M4 334 aa10.66□□□□□ -0.7
PDLIM1P3-201ENST00000582370 MAP3K21Q5TCX8 1036 aa10.66□□□□□ -0.7
PDLIM1P3-201ENST00000582370 MYLIPQ8WY64 445 aa10.66□□□□□ -0.7
PDLIM1P3-201ENST00000582370 LRRCC1Q9C099 1032 aa10.66□□□□□ -0.7
PDLIM1P3-201ENST00000582370 SEMA6BQ9H3T3 888 aa10.66□□□□□ -0.7
PDLIM1P3-201ENST00000582370 C1orf115Q9H7X2 142 aa10.66□□□□□ -0.7
PDLIM1P3-201ENST00000582370 GPR108Q9NPR9 543 aa10.66□□□□□ -0.7
PDLIM1P3-201ENST00000582370 AGTPBP1Q9UPW5 1226 aa10.66□□□□□ -0.7
PDLIM1P3-201ENST00000582370 AFG3L2Q9Y4W6 797 aa10.66□□□□□ -0.7
PDLIM1P3-201ENST00000582370 ZHX2Q9Y6X8 837 aa10.66□□□□□ -0.7
PDLIM1P3-201ENST00000582370 ATRNL1Q5VV63 1379 aa10.65□□□□□ -0.7
PDLIM1P3-201ENST00000582370 PNMA6EA0A0J9YXQ4 647 aa10.65□□□□□ -0.7
PDLIM1P3-201ENST00000582370 EYA2O00167 538 aa10.65□□□□□ -0.7
PDLIM1P3-201ENST00000582370 PTPRAP18433 802 aa10.65□□□□□ -0.7
PDLIM1P3-201ENST00000582370 GCLCP48506 637 aaPredicted RBP10.65□□□□□ -0.7
PDLIM1P3-201ENST00000582370 TRIM32Q13049 653 aa10.65□□□□□ -0.7
PDLIM1P3-201ENST00000582370 FBXO33Q7Z6M2 555 aa10.65□□□□□ -0.7
PDLIM1P3-201ENST00000582370 SIRT2Q8IXJ6 389 aa10.65□□□□□ -0.7
PDLIM1P3-201ENST00000582370 CLASRPQ8N2M8 674 aaKnown RBP10.65□□□□□ -0.7
PDLIM1P3-201ENST00000582370 TRIB2Q92519 343 aa10.65□□□□□ -0.7
PDLIM1P3-201ENST00000582370 ZNF594Q96JF6 807 aaPredicted RBP10.65□□□□□ -0.7
PDLIM1P3-201ENST00000582370 RAPGEFL1Q9UHV5 662 aa10.65□□□□□ -0.7
PDLIM1P3-201ENST00000582370 GJD2Q9UKL4 321 aa10.65□□□□□ -0.7
PDLIM1P3-201ENST00000582370 TMEM265A0A087WTH1 108 aa10.64□□□□□ -0.71
PDLIM1P3-201ENST00000582370 PHF20L1A8MW92 1017 aa10.64□□□□□ -0.71
PDLIM1P3-201ENST00000582370 PRKAR2AP13861 404 aaKnown RBP10.64□□□□□ -0.71
PDLIM1P3-201ENST00000582370 SMAD3P84022 425 aaKnown RBP10.64□□□□□ -0.71
PDLIM1P3-201ENST00000582370 TCP10Q12799 353 aa10.64□□□□□ -0.71
PDLIM1P3-201ENST00000582370 CAVIN4Q5BKX8 364 aa10.64□□□□□ -0.71
PDLIM1P3-201ENST00000582370 PROCA1Q8NCQ7 364 aaPredicted RBP10.64□□□□□ -0.71
PDLIM1P3-201ENST00000582370 GPATCH3Q96I76 525 aa10.64□□□□□ -0.71
PDLIM1P3-201ENST00000582370 CEP126Q9P2H0 1117 aa10.64□□□□□ -0.71
PDLIM1P3-201ENST00000582370 IQSEC3Q9UPP2 1182 aaPredicted RBP10.64□□□□□ -0.71
PDLIM1P3-201ENST00000582370 EIF5BO60841 1220 aaKnown RBP10.63□□□□□ -0.71
PDLIM1P3-201ENST00000582370 RFX5P48382 616 aaPredicted RBP10.63□□□□□ -0.71
PDLIM1P3-201ENST00000582370 NUCB1Q02818 461 aa10.63□□□□□ -0.71
PDLIM1P3-201ENST00000582370 EPHA10Q5JZY3 1008 aa10.63□□□□□ -0.71
PDLIM1P3-201ENST00000582370 TICAM2Q86XR7 235 aa10.63□□□□□ -0.71
PDLIM1P3-201ENST00000582370 TRMT44Q8IYL2 757 aaKnown RBP10.63□□□□□ -0.71
PDLIM1P3-201ENST00000582370 SOCS4Q8WXH5 440 aa10.63□□□□□ -0.71
PDLIM1P3-201ENST00000582370 TTYH1Q9H313 450 aaPredicted RBP10.63□□□□□ -0.71
PDLIM1P3-201ENST00000582370 PRKAG2Q9UGJ0 569 aa10.63□□□□□ -0.71
PDLIM1P3-201ENST00000582370 BDP1A6H8Y1 2624 aa10.63□□□□□ -0.71
PDLIM1P3-201ENST00000582370 TRIM75PA6NK02 468 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms