RNA–Protein interactions for RNA: ENST00000581711.1

SMCHD1-207, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 4

Gene SMCHD1, Length 546 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-207ENST00000581711 NTF4P34130 210 aa8.91□□□□□ -0.98
SMCHD1-207ENST00000581711 PPM1JQ5JR12 505 aa8.91□□□□□ -0.98
SMCHD1-207ENST00000581711 CYFIP1Q7L576 1253 aa8.91□□□□□ -0.98
SMCHD1-207ENST00000581711 UBE3DQ7Z6J8 389 aa8.91□□□□□ -0.98
SMCHD1-207ENST00000581711 CCDC82Q8N4S0 544 aa8.91□□□□□ -0.98
SMCHD1-207ENST00000581711 KRT1P04264 644 aa8.9□□□□□ -0.98
SMCHD1-207ENST00000581711 ACSBG1Q96GR2 724 aa8.9□□□□□ -0.98
SMCHD1-207ENST00000581711 CSRNP1Q96S65 589 aa8.9□□□□□ -0.98
SMCHD1-207ENST00000581711 C1orf115Q9H7X2 142 aa8.9□□□□□ -0.98
SMCHD1-207ENST00000581711 NCANO14594 1321 aa8.89□□□□□ -0.99
SMCHD1-207ENST00000581711 EOMESO95936 686 aa8.89□□□□□ -0.99
SMCHD1-207ENST00000581711 C1QTNF9P0C862 333 aa8.89□□□□□ -0.99
SMCHD1-207ENST00000581711 XRCC5P13010 732 aaKnown RBP8.89□□□□□ -0.99
SMCHD1-207ENST00000581711 NME2P22392 152 aa8.89□□□□□ -0.99
SMCHD1-207ENST00000581711 ZNF252P-AS1Q0IIN9 211 aa8.89□□□□□ -0.99
SMCHD1-207ENST00000581711 TMEM67Q5HYA8 995 aa8.89□□□□□ -0.99
SMCHD1-207ENST00000581711 TMC1Q8TDI8 760 aa8.89□□□□□ -0.99
SMCHD1-207ENST00000581711 CARS2Q9HA77 564 aaKnown RBP8.89□□□□□ -0.99
SMCHD1-207ENST00000581711 C19orf73Q9NVV2 129 aa8.89□□□□□ -0.99
SMCHD1-207ENST00000581711 CACNA2D2Q9NY47 1150 aa8.89□□□□□ -0.99
SMCHD1-207ENST00000581711 CSADQ9Y600 493 aa8.89□□□□□ -0.99
SMCHD1-207ENST00000581711 PRRG2O14669 202 aa8.88□□□□□ -0.99
SMCHD1-207ENST00000581711 PI16Q6UXB8 463 aa8.88□□□□□ -0.99
SMCHD1-207ENST00000581711 EMILIN2Q9BXX0 1053 aa8.88□□□□□ -0.99
SMCHD1-207ENST00000581711 PRDM5Q9NQX1 630 aaPredicted RBP8.88□□□□□ -0.99
SMCHD1-207ENST00000581711 PPP4R2Q9NY27 417 aa8.88□□□□□ -0.99
SMCHD1-207ENST00000581711 NFIBO00712 420 aa8.87□□□□□ -0.99
SMCHD1-207ENST00000581711 MPRIPQ6WCQ1 1025 aa8.87□□□□□ -0.99
SMCHD1-207ENST00000581711 FOXQ1Q9C009 403 aa8.87□□□□□ -0.99
SMCHD1-207ENST00000581711 PICK1Q9NRD5 415 aa8.87□□□□□ -0.99
SMCHD1-207ENST00000581711 MAPK8IP1Q9UQF2 711 aa8.87□□□□□ -0.99
SMCHD1-207ENST00000581711 GDNFP39905 211 aa8.86□□□□□ -0.99
SMCHD1-207ENST00000581711 B4GALNT3Q6L9W6 998 aa8.86□□□□□ -0.99
SMCHD1-207ENST00000581711 TTLL10Q6ZVT0 673 aa8.86□□□□□ -0.99
SMCHD1-207ENST00000581711 FBXO15Q8NCQ5 510 aaPredicted RBP8.86□□□□□ -0.99
SMCHD1-207ENST00000581711 ALKBH8Q96BT7 664 aaKnown RBP8.86□□□□□ -0.99
SMCHD1-207ENST00000581711 BCO2Q9BYV7 579 aa8.86□□□□□ -0.99
SMCHD1-207ENST00000581711 CBX8Q9HC52 389 aa8.86□□□□□ -0.99
SMCHD1-207ENST00000581711 ATP13A1Q9HD20 1204 aa8.86□□□□□ -0.99
SMCHD1-207ENST00000581711 NLRP2Q9NX02 1062 aa8.86□□□□□ -0.99
SMCHD1-207ENST00000581711 AKAP2Q9Y2D5 859 aa8.86□□□□□ -0.99
SMCHD1-207ENST00000581711 DCDC2CA8MYV0 355 aa8.85□□□□□ -0.99
SMCHD1-207ENST00000581711 B8ZZF3 427 aa8.85□□□□□ -0.99
SMCHD1-207ENST00000581711 RING1Q06587 406 aa8.85□□□□□ -0.99
SMCHD1-207ENST00000581711 ZBTB37Q5TC79 503 aa8.85□□□□□ -0.99
SMCHD1-207ENST00000581711 ERICH6Q7L0X2 663 aa8.85□□□□□ -0.99
SMCHD1-207ENST00000581711 DIRC2Q96SL1 478 aa8.85□□□□□ -0.99
SMCHD1-207ENST00000581711 SEMA3GQ9NS98 782 aa8.85□□□□□ -0.99
SMCHD1-207ENST00000581711 ARMCX6Q7L4S7 300 aa8.84□□□□□ -0.99
SMCHD1-207ENST00000581711 C12orf40Q86WS4 652 aa8.84□□□□□ -0.99
SMCHD1-207ENST00000581711 DMRTB1Q96MA1 342 aa8.84□□□□□ -0.99
SMCHD1-207ENST00000581711 HSPA12BQ96MM6 686 aa8.84□□□□□ -0.99
SMCHD1-207ENST00000581711 NSUN3Q9H649 340 aaKnown RBP8.84□□□□□ -0.99
SMCHD1-207ENST00000581711 RAPGEFL1Q9UHV5 662 aa8.84□□□□□ -0.99
SMCHD1-207ENST00000581711 FANCGO15287 622 aa8.83□□□□□ -1
SMCHD1-207ENST00000581711 CDC37L1Q7L3B6 337 aa8.83□□□□□ -1
SMCHD1-207ENST00000581711 GRIN3AQ8TCU5 1115 aa8.83□□□□□ -1
SMCHD1-207ENST00000581711 PRR33A8MZF0 331 aa8.82□□□□□ -1
SMCHD1-207ENST00000581711 NPIPB6E9PJ23 425 aa8.82□□□□□ -1
SMCHD1-207ENST00000581711 AMIGO3Q86WK7 504 aa8.82□□□□□ -1
SMCHD1-207ENST00000581711 NPAS4Q8IUM7 802 aa8.82□□□□□ -1
SMCHD1-207ENST00000581711 FAM155AB1AL88 458 aaPredicted RBP8.81□□□□□ -1
SMCHD1-207ENST00000581711 CDKAL1Q5VV42 579 aa8.81□□□□□ -1
SMCHD1-207ENST00000581711 KCT2Q8NC54 265 aa8.81□□□□□ -1
SMCHD1-207ENST00000581711 NECAB3Q96P71 396 aaPredicted RBP8.81□□□□□ -1
SMCHD1-207ENST00000581711 USTQ9Y2C2 406 aa8.81□□□□□ -1
SMCHD1-207ENST00000581711 LRIG2O94898 1065 aa8.8□□□□□ -1
SMCHD1-207ENST00000581711 TRIM37O94972 964 aa8.8□□□□□ -1
SMCHD1-207ENST00000581711 SLITRK5O94991 958 aa8.8□□□□□ -1
SMCHD1-207ENST00000581711 BUD31P41223 144 aaPredicted RBP8.8□□□□□ -1
SMCHD1-207ENST00000581711 NXPE4Q6UWF7 544 aa8.8□□□□□ -1
SMCHD1-207ENST00000581711 C22orf34Q6ZV56 151 aa8.8□□□□□ -1
SMCHD1-207ENST00000581711 MFSD4AQ8N468 514 aa8.8□□□□□ -1
SMCHD1-207ENST00000581711 RBCK1Q9BYM8 510 aa8.8□□□□□ -1
SMCHD1-207ENST00000581711 CD320Q9NPF0 282 aa8.8□□□□□ -1
SMCHD1-207ENST00000581711 TMEM253P0C7T8 217 aa8.79□□□□□ -1
SMCHD1-207ENST00000581711 BMP6P22004 513 aa8.79□□□□□ -1
SMCHD1-207ENST00000581711 C3orf58Q8NDZ4 430 aa8.79□□□□□ -1
SMCHD1-207ENST00000581711 KRTAP9-3Q9BYQ3 159 aa8.79□□□□□ -1
SMCHD1-207ENST00000581711 KCNK12Q9HB15 430 aa8.79□□□□□ -1
SMCHD1-207ENST00000581711 TPX2Q9ULW0 747 aaKnown RBP8.79□□□□□ -1
SMCHD1-207ENST00000581711 CNTNAP4Q9C0A0 1308 aa8.79□□□□□ -1
SMCHD1-207ENST00000581711 H3BS24 57 aa8.78□□□□□ -1
SMCHD1-207ENST00000581711 ENC1O14682 589 aa8.78□□□□□ -1
SMCHD1-207ENST00000581711 KCNA10Q16322 511 aa8.78□□□□□ -1
SMCHD1-207ENST00000581711 CCDC120Q96HB5 630 aa8.78□□□□□ -1
SMCHD1-207ENST00000581711 ALPK1Q96QP1 1244 aa8.78□□□□□ -1
SMCHD1-207ENST00000581711 EPB41L4BQ9H329 900 aa8.78□□□□□ -1
SMCHD1-207ENST00000581711 DCP1AQ9NPI6 582 aaPredicted RBP8.78□□□□□ -1
SMCHD1-207ENST00000581711 SAMM50Q9Y512 469 aa8.78□□□□□ -1
SMCHD1-207ENST00000581711 ST14Q9Y5Y6 855 aa8.78□□□□□ -1
SMCHD1-207ENST00000581711 PAGE1O75459 146 aa8.77□□□□□ -1.01
SMCHD1-207ENST00000581711 INHBBP09529 407 aa8.77□□□□□ -1.01
SMCHD1-207ENST00000581711 FGD1P98174 961 aa8.77□□□□□ -1.01
SMCHD1-207ENST00000581711 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.77□□□□□ -1.01
SMCHD1-207ENST00000581711 SFRP5Q5T4F7 317 aa8.77□□□□□ -1.01
SMCHD1-207ENST00000581711 TPTE2Q6XPS3 522 aa8.77□□□□□ -1.01
SMCHD1-207ENST00000581711 ATG14Q6ZNE5 492 aa8.77□□□□□ -1.01
SMCHD1-207ENST00000581711 ZNF507Q8TCN5 953 aa8.77□□□□□ -1.01
SMCHD1-207ENST00000581711 ARID3AQ99856 593 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms