RNA–Protein interactions for RNA: ENST00000581655.1

CSNK1D-218, Transcript of casein kinase 1 delta, humanhuman

TSL 4

Gene CSNK1D, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-218ENST00000581655 CDX2Q99626 313 aaPredicted RBP15.74■□□□□ 0.11
CSNK1D-218ENST00000581655 LBHD1Q9BQE6 289 aaPredicted RBP15.74■□□□□ 0.11
CSNK1D-218ENST00000581655 FAM196BA6NMK8 535 aa15.73■□□□□ 0.11
CSNK1D-218ENST00000581655 HMGCS2P54868 508 aa15.73■□□□□ 0.11
CSNK1D-218ENST00000581655 CACNB2Q08289 660 aaPredicted RBP15.73■□□□□ 0.11
CSNK1D-218ENST00000581655 PABPC4Q13310 644 aaKnown RBP eCLIP15.73■□□□□ 0.11
CSNK1D-218ENST00000581655 PICALMQ13492 652 aa15.73■□□□□ 0.11
CSNK1D-218ENST00000581655 NUDT12Q9BQG2 462 aa15.73■□□□□ 0.11
CSNK1D-218ENST00000581655 SALL1Q9NSC2 1324 aa15.72■□□□□ 0.11
CSNK1D-218ENST00000581655 LHX8Q68G74 356 aa15.72■□□□□ 0.11
CSNK1D-218ENST00000581655 ZNF280CQ8ND82 737 aa15.72■□□□□ 0.11
CSNK1D-218ENST00000581655 MORF4L1Q9UBU8 362 aa15.72■□□□□ 0.11
CSNK1D-218ENST00000581655 ATAD5Q96QE3 1844 aa15.72■□□□□ 0.11
CSNK1D-218ENST00000581655 MAST2Q6P0Q8 1798 aa15.72■□□□□ 0.11
CSNK1D-218ENST00000581655 GAKO14976 1311 aa15.71■□□□□ 0.11
CSNK1D-218ENST00000581655 CDH23Q9H251 3354 aa15.71■□□□□ 0.11
CSNK1D-218ENST00000581655 EYA2O00167 538 aa15.71■□□□□ 0.11
CSNK1D-218ENST00000581655 PEX10O60683 326 aa15.71■□□□□ 0.11
CSNK1D-218ENST00000581655 XRCC5P13010 732 aaKnown RBP15.71■□□□□ 0.11
CSNK1D-218ENST00000581655 ZKSCAN1P17029 563 aaPredicted RBP15.71■□□□□ 0.11
CSNK1D-218ENST00000581655 CCND3P30281 292 aaPredicted RBP15.71■□□□□ 0.11
CSNK1D-218ENST00000581655 SOCS4Q8WXH5 440 aa15.71■□□□□ 0.11
CSNK1D-218ENST00000581655 MYLIPQ8WY64 445 aa15.71■□□□□ 0.11
CSNK1D-218ENST00000581655 SEMA6BQ9H3T3 888 aa15.71■□□□□ 0.11
CSNK1D-218ENST00000581655 GNL3LQ9NVN8 582 aaKnown RBP15.71■□□□□ 0.11
CSNK1D-218ENST00000581655 FRMPD3Q5JV73 1810 aa15.71■□□□□ 0.1
CSNK1D-218ENST00000581655 TBC1D12O60347 775 aa15.7■□□□□ 0.1
CSNK1D-218ENST00000581655 COL9A1P20849 921 aa15.7■□□□□ 0.1
CSNK1D-218ENST00000581655 SENP6Q9GZR1 1112 aaPredicted RBP15.7■□□□□ 0.1
CSNK1D-218ENST00000581655 OSBPL5Q9H0X9 879 aaPredicted RBP15.7■□□□□ 0.1
CSNK1D-218ENST00000581655 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.7■□□□□ 0.1
CSNK1D-218ENST00000581655 DENND2AQ9ULE3 1009 aa15.7■□□□□ 0.1
CSNK1D-218ENST00000581655 SALL2Q9Y467 1007 aaPredicted RBP15.7■□□□□ 0.1
CSNK1D-218ENST00000581655 MUC3AQ02505 3323 aa15.7■□□□□ 0.1
CSNK1D-218ENST00000581655 BTDP43251 543 aa15.69■□□□□ 0.1
CSNK1D-218ENST00000581655 PHKA1P46020 1223 aa15.69■□□□□ 0.1
CSNK1D-218ENST00000581655 IRX3P78415 501 aaPredicted RBP15.69■□□□□ 0.1
CSNK1D-218ENST00000581655 PDE3AQ14432 1141 aa15.69■□□□□ 0.1
CSNK1D-218ENST00000581655 CCL14Q16627 93 aa15.69■□□□□ 0.1
CSNK1D-218ENST00000581655 ATP2B3Q16720 1220 aa15.69■□□□□ 0.1
CSNK1D-218ENST00000581655 SH3D19Q5HYK7 790 aa15.69■□□□□ 0.1
CSNK1D-218ENST00000581655 DZIP1Q86YF9 867 aaKnown RBP15.69■□□□□ 0.1
CSNK1D-218ENST00000581655 TRMT44Q8IYL2 757 aaKnown RBP15.69■□□□□ 0.1
CSNK1D-218ENST00000581655 SYMPKQ92797 1274 aaKnown RBP15.69■□□□□ 0.1
CSNK1D-218ENST00000581655 LTBP2Q14767 1821 aa15.68■□□□□ 0.1
CSNK1D-218ENST00000581655 RFX5P48382 616 aaPredicted RBP15.68■□□□□ 0.1
CSNK1D-218ENST00000581655 ATN1P54259 1190 aaPredicted RBP15.68■□□□□ 0.1
CSNK1D-218ENST00000581655 SHHQ15465 462 aa15.68■□□□□ 0.1
CSNK1D-218ENST00000581655 CCDC184Q52MB2 194 aa15.68■□□□□ 0.1
CSNK1D-218ENST00000581655 ATG9AQ7Z3C6 839 aa15.68■□□□□ 0.1
CSNK1D-218ENST00000581655 WDR63Q8IWG1 891 aa15.68■□□□□ 0.1
CSNK1D-218ENST00000581655 P2RX7Q99572 595 aaKnown RBP15.68■□□□□ 0.1
CSNK1D-218ENST00000581655 TBC1D2Q9BYX2 928 aa15.68■□□□□ 0.1
CSNK1D-218ENST00000581655 TXNRD2Q9NNW7 524 aa15.68■□□□□ 0.1
CSNK1D-218ENST00000581655 USP17L5A8MUK1 530 aa15.67■□□□□ 0.1
CSNK1D-218ENST00000581655 SEMA3EO15041 775 aa15.67■□□□□ 0.1
CSNK1D-218ENST00000581655 CAP2P40123 477 aa15.67■□□□□ 0.1
CSNK1D-218ENST00000581655 RRP1BQ14684 758 aaKnown RBP15.67■□□□□ 0.1
CSNK1D-218ENST00000581655 NCBP3Q53F19 620 aaKnown RBP15.67■□□□□ 0.1
CSNK1D-218ENST00000581655 SLF2Q8IX21 1173 aa15.67■□□□□ 0.1
CSNK1D-218ENST00000581655 ZGPATQ8N5A5 531 aaKnown RBP15.67■□□□□ 0.1
CSNK1D-218ENST00000581655 GPRC5AQ8NFJ5 357 aa15.67■□□□□ 0.1
CSNK1D-218ENST00000581655 USP6NLQ92738 828 aa15.67■□□□□ 0.1
CSNK1D-218ENST00000581655 FAM163AQ96GL9 167 aaPredicted RBP15.67■□□□□ 0.1
CSNK1D-218ENST00000581655 TTYH1Q9H313 450 aaPredicted RBP15.67■□□□□ 0.1
CSNK1D-218ENST00000581655 ABCF2Q9UG63 623 aa15.67■□□□□ 0.1
CSNK1D-218ENST00000581655 PRKAG2Q9UGJ0 569 aa15.67■□□□□ 0.1
CSNK1D-218ENST00000581655 FOSL2P15408 326 aa15.66■□□□□ 0.1
CSNK1D-218ENST00000581655 MAPK4P31152 587 aa15.66■□□□□ 0.1
CSNK1D-218ENST00000581655 RGS2P41220 211 aa15.66■□□□□ 0.1
CSNK1D-218ENST00000581655 RHBDL3P58872 404 aa15.66■□□□□ 0.1
CSNK1D-218ENST00000581655 HERVK_113P62684 666 aa15.66■□□□□ 0.1
CSNK1D-218ENST00000581655 C9orf50Q5SZB4 431 aa15.66■□□□□ 0.1
CSNK1D-218ENST00000581655 CCAR1Q8IX12 1150 aaKnown RBP15.66■□□□□ 0.1
CSNK1D-218ENST00000581655 SIL1Q9H173 461 aa15.66■□□□□ 0.1
CSNK1D-218ENST00000581655 PORCNQ9H237 461 aa15.66■□□□□ 0.1
CSNK1D-218ENST00000581655 MROH7-TTC4A0A0A0MT08 1334 aa15.66■□□□□ 0.1
CSNK1D-218ENST00000581655 MTMR2Q13614 643 aa15.65■□□□□ 0.1
CSNK1D-218ENST00000581655 Q3C1V9 767 aa15.65■□□□□ 0.1
CSNK1D-218ENST00000581655 MORN1Q5T089 497 aa15.65■□□□□ 0.1
CSNK1D-218ENST00000581655 GPR142Q7Z601 462 aa15.65■□□□□ 0.1
CSNK1D-218ENST00000581655 APBA2Q99767 749 aa15.65■□□□□ 0.1
CSNK1D-218ENST00000581655 USP44Q9H0E7 712 aa15.65■□□□□ 0.1
CSNK1D-218ENST00000581655 AS3MTQ9HBK9 375 aa15.65■□□□□ 0.1
CSNK1D-218ENST00000581655 TMOD4Q9NZQ9 345 aa15.65■□□□□ 0.1
CSNK1D-218ENST00000581655 CEP126Q9P2H0 1117 aa15.65■□□□□ 0.1
CSNK1D-218ENST00000581655 RBPJLQ9UBG7 517 aa15.65■□□□□ 0.1
CSNK1D-218ENST00000581655 RAPGEFL1Q9UHV5 662 aa15.65■□□□□ 0.1
CSNK1D-218ENST00000581655 NPM3O75607 178 aaKnown RBP15.64■□□□□ 0.09
CSNK1D-218ENST00000581655 ADORA1P30542 326 aa15.64■□□□□ 0.09
CSNK1D-218ENST00000581655 HOXA7P31268 230 aaPredicted RBP15.64■□□□□ 0.09
CSNK1D-218ENST00000581655 RTP1P59025 263 aa15.64■□□□□ 0.09
CSNK1D-218ENST00000581655 ERVK-9P63128 1117 aa15.64■□□□□ 0.09
CSNK1D-218ENST00000581655 ERVK-24P63145 666 aa15.64■□□□□ 0.09
CSNK1D-218ENST00000581655 RASGRF1Q13972 1273 aa15.64■□□□□ 0.09
CSNK1D-218ENST00000581655 PLEKHH3Q7Z736 793 aa15.64■□□□□ 0.09
CSNK1D-218ENST00000581655 NCOR1O75376 2440 aa15.63■□□□□ 0.09
CSNK1D-218ENST00000581655 GPR75-ASB3A0A0A6YYF3 556 aa15.63■□□□□ 0.09
CSNK1D-218ENST00000581655 BACE1P56817 501 aa15.63■□□□□ 0.09
CSNK1D-218ENST00000581655 SMAD3P84022 425 aaKnown RBP15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms