RNA–Protein interactions for RNA: ENST00000581549.1

LINC00511-213, long intergenic non-protein coding RNA 511, humanhuman

TSL 2 BASIC

Gene LINC00511, Length 2,265 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00511-213ENST00000581549 PRDM1O75626 825 aa16.34■□□□□ 0.21
LINC00511-213ENST00000581549 SSRP1Q08945 709 aaKnown RBP16.34■□□□□ 0.21
LINC00511-213ENST00000581549 CCDC173Q0VFZ6 552 aa16.34■□□□□ 0.21
LINC00511-213ENST00000581549 DIXDC1Q155Q3 683 aa16.34■□□□□ 0.21
LINC00511-213ENST00000581549 ENAHQ8N8S7 591 aaPredicted RBP16.34■□□□□ 0.21
LINC00511-213ENST00000581549 RTEL1Q9NZ71 1219 aa16.34■□□□□ 0.21
LINC00511-213ENST00000581549 ATP6V0A2Q9Y487 856 aa16.34■□□□□ 0.21
LINC00511-213ENST00000581549 KRT40Q6A162 431 aa16.34■□□□□ 0.21
LINC00511-213ENST00000581549 NBPF11Q86T75 865 aa16.34■□□□□ 0.21
LINC00511-213ENST00000581549 SH3RF3Q8TEJ3 882 aaPredicted RBP16.34■□□□□ 0.21
LINC00511-213ENST00000581549 DACT1Q9NYF0 836 aa16.34■□□□□ 0.21
LINC00511-213ENST00000581549 NAV1Q8NEY1 1877 aa16.33■□□□□ 0.21
LINC00511-213ENST00000581549 UBE2Q2LH0YL09 131 aa16.33■□□□□ 0.2
LINC00511-213ENST00000581549 NPR1P16066 1061 aa16.33■□□□□ 0.2
LINC00511-213ENST00000581549 MYSM1Q5VVJ2 828 aa16.33■□□□□ 0.2
LINC00511-213ENST00000581549 FANCBQ8NB91 859 aa16.33■□□□□ 0.2
LINC00511-213ENST00000581549 RNF214Q8ND24 703 aa16.33■□□□□ 0.2
LINC00511-213ENST00000581549 SLC26A6Q9BXS9 759 aa16.33■□□□□ 0.2
LINC00511-213ENST00000581549 NUP62CLQ9H1M0 184 aa16.33■□□□□ 0.2
LINC00511-213ENST00000581549 MROH7-TTC4A0A0A0MT08 1334 aa16.33■□□□□ 0.2
LINC00511-213ENST00000581549 POLR3DP05423 398 aaPredicted RBP16.33■□□□□ 0.2
LINC00511-213ENST00000581549 LDHCP07864 332 aa16.33■□□□□ 0.2
LINC00511-213ENST00000581549 MMP10P09238 476 aa16.33■□□□□ 0.2
LINC00511-213ENST00000581549 BICD2Q8TD16 824 aa16.33■□□□□ 0.2
LINC00511-213ENST00000581549 RTFDC1Q9BY42 306 aaPredicted RBP16.33■□□□□ 0.2
LINC00511-213ENST00000581549 DDX19AQ9NUU7 478 aaKnown RBP16.33■□□□□ 0.2
LINC00511-213ENST00000581549 C6orf229H3BNL8 230 aa16.32■□□□□ 0.2
LINC00511-213ENST00000581549 NR1I2O75469 434 aa16.32■□□□□ 0.2
LINC00511-213ENST00000581549 USP17L8P0C7I0 530 aa16.32■□□□□ 0.2
LINC00511-213ENST00000581549 CLSTN2Q9H4D0 955 aa16.32■□□□□ 0.2
LINC00511-213ENST00000581549 MCM9Q9NXL9 1143 aa16.32■□□□□ 0.2
LINC00511-213ENST00000581549 CCDC196A0A1B0GTZ2 297 aa16.31■□□□□ 0.2
LINC00511-213ENST00000581549 BAG3O95817 575 aa16.31■□□□□ 0.2
LINC00511-213ENST00000581549 SLC3A2P08195 630 aaKnown RBP16.31■□□□□ 0.2
LINC00511-213ENST00000581549 GUCY1A2P33402 732 aa16.31■□□□□ 0.2
LINC00511-213ENST00000581549 C12orf60Q5U649 245 aa16.31■□□□□ 0.2
LINC00511-213ENST00000581549 CRACR2BQ8N4Y2 399 aaPredicted RBP16.31■□□□□ 0.2
LINC00511-213ENST00000581549 LINC00301Q8NCQ3 95 aa16.31■□□□□ 0.2
LINC00511-213ENST00000581549 ANP32BQ92688 251 aaKnown RBP16.31■□□□□ 0.2
LINC00511-213ENST00000581549 CLIC4Q9Y696 253 aa16.31■□□□□ 0.2
LINC00511-213ENST00000581549 PARP3Q9Y6F1 533 aa16.31■□□□□ 0.2
LINC00511-213ENST00000581549 FAM205AQ6ZU69 1335 aa16.31■□□□□ 0.2
LINC00511-213ENST00000581549 MYH6P13533 1939 aa16.31■□□□□ 0.2
LINC00511-213ENST00000581549 PPP2R5BQ15173 497 aa16.31■□□□□ 0.2
LINC00511-213ENST00000581549 RBM43Q6ZSC3 357 aaKnown RBP16.31■□□□□ 0.2
LINC00511-213ENST00000581549 IQCA1Q86XH1 822 aa16.31■□□□□ 0.2
LINC00511-213ENST00000581549 NUP133Q8WUM0 1156 aa16.31■□□□□ 0.2
LINC00511-213ENST00000581549 WASF1Q92558 559 aa16.31■□□□□ 0.2
LINC00511-213ENST00000581549 POLR3EQ9NVU0 708 aa16.31■□□□□ 0.2
LINC00511-213ENST00000581549 DDX60LQ5H9U9 1706 aaKnown RBP16.3■□□□□ 0.2
LINC00511-213ENST00000581549 PDE6BP35913 854 aa16.3■□□□□ 0.2
LINC00511-213ENST00000581549 USP5P45974 858 aa16.3■□□□□ 0.2
LINC00511-213ENST00000581549 IFIT1BQ5T764 474 aaKnown RBP16.3■□□□□ 0.2
LINC00511-213ENST00000581549 GOLPH3LQ9H4A5 285 aa16.3■□□□□ 0.2
LINC00511-213ENST00000581549 RGS17Q9UGC6 210 aaPredicted RBP16.3■□□□□ 0.2
LINC00511-213ENST00000581549 ROBO3Q96MS0 1386 aa16.3■□□□□ 0.2
LINC00511-213ENST00000581549 GPR75-ASB3A0A0A6YYF3 556 aa16.3■□□□□ 0.2
LINC00511-213ENST00000581549 YEATS4O95619 227 aa16.3■□□□□ 0.2
LINC00511-213ENST00000581549 U2AF2P26368 475 aaKnown RBP eCLIP16.3■□□□□ 0.2
LINC00511-213ENST00000581549 CAMK4Q16566 473 aa16.3■□□□□ 0.2
LINC00511-213ENST00000581549 MAP3K11Q16584 847 aa16.3■□□□□ 0.2
LINC00511-213ENST00000581549 CCAR1Q8IX12 1150 aaKnown RBP16.3■□□□□ 0.2
LINC00511-213ENST00000581549 FAM163AQ96GL9 167 aaPredicted RBP16.3■□□□□ 0.2
LINC00511-213ENST00000581549 PDLIM2Q96JY6 352 aa16.3■□□□□ 0.2
LINC00511-213ENST00000581549 ALDH1B1P30837 517 aa16.29■□□□□ 0.2
LINC00511-213ENST00000581549 BTDP43251 543 aa16.29■□□□□ 0.2
LINC00511-213ENST00000581549 PDE4BQ07343 736 aa16.29■□□□□ 0.2
LINC00511-213ENST00000581549 FAM47AQ5JRC9 791 aa16.29■□□□□ 0.2
LINC00511-213ENST00000581549 MFSD14BQ5SR56 506 aa16.29■□□□□ 0.2
LINC00511-213ENST00000581549 MSL1Q68DK7 614 aa16.29■□□□□ 0.2
LINC00511-213ENST00000581549 OLFM4Q6UX06 510 aa16.29■□□□□ 0.2
LINC00511-213ENST00000581549 TRIM22Q8IYM9 498 aa16.29■□□□□ 0.2
LINC00511-213ENST00000581549 CMTR1Q8N1G2 835 aaKnown RBP16.29■□□□□ 0.2
LINC00511-213ENST00000581549 TBC1D22AQ8WUA7 517 aa16.29■□□□□ 0.2
LINC00511-213ENST00000581549 NOL10Q9BSC4 688 aaKnown RBP16.29■□□□□ 0.2
LINC00511-213ENST00000581549 TNMDQ9H2S6 317 aa16.29■□□□□ 0.2
LINC00511-213ENST00000581549 PCDHA7Q9UN72 937 aa16.29■□□□□ 0.2
LINC00511-213ENST00000581549 NMT2O60551 498 aa16.29■□□□□ 0.2
LINC00511-213ENST00000581549 DEXIO95424 95 aa16.29■□□□□ 0.2
LINC00511-213ENST00000581549 FUT2Q10981 343 aa16.29■□□□□ 0.2
LINC00511-213ENST00000581549 TROAPQ12815 778 aa16.29■□□□□ 0.2
LINC00511-213ENST00000581549 TRIM29Q14134 588 aa16.29■□□□□ 0.2
LINC00511-213ENST00000581549 UVSSAQ2YD98 709 aa16.29■□□□□ 0.2
LINC00511-213ENST00000581549 CATIPQ7Z7H3 387 aa16.29■□□□□ 0.2
LINC00511-213ENST00000581549 CERS3Q8IU89 383 aa16.29■□□□□ 0.2
LINC00511-213ENST00000581549 TGFBRAP1Q8WUH2 860 aa16.29■□□□□ 0.2
LINC00511-213ENST00000581549 MASTLQ96GX5 879 aa16.29■□□□□ 0.2
LINC00511-213ENST00000581549 COA1Q9GZY4 146 aa16.29■□□□□ 0.2
LINC00511-213ENST00000581549 GAKO14976 1311 aa16.28■□□□□ 0.2
LINC00511-213ENST00000581549 ME1P48163 572 aa16.28■□□□□ 0.2
LINC00511-213ENST00000581549 ANO1Q5XXA6 986 aa16.28■□□□□ 0.2
LINC00511-213ENST00000581549 MPNDQ8N594 471 aa16.28■□□□□ 0.2
LINC00511-213ENST00000581549 ENGASEQ8NFI3 743 aa16.28■□□□□ 0.2
LINC00511-213ENST00000581549 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.28■□□□□ 0.2
LINC00511-213ENST00000581549 FOCADQ5VW36 1801 aa16.28■□□□□ 0.2
LINC00511-213ENST00000581549 QSER1Q2KHR3 1735 aa16.28■□□□□ 0.2
LINC00511-213ENST00000581549 RIMBP2O15034 1052 aa16.28■□□□□ 0.2
LINC00511-213ENST00000581549 DDAH1O94760 285 aa16.28■□□□□ 0.2
LINC00511-213ENST00000581549 SNW1Q13573 536 aaKnown RBP16.28■□□□□ 0.2
LINC00511-213ENST00000581549 STK38Q15208 465 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms