RNA–Protein interactions for RNA: ENST00000581166.5

SUPT4H1-205, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

TSL 2

Gene SUPT4H1, Length 1,401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-205ENST00000581166 HAUS7Q99871 368 aa17.05■□□□□ 0.32
SUPT4H1-205ENST00000581166 PAG1Q9NWQ8 432 aa17.05■□□□□ 0.32
SUPT4H1-205ENST00000581166 ZHX2Q9Y6X8 837 aa17.05■□□□□ 0.32
SUPT4H1-205ENST00000581166 SIPA1L1O43166 1804 aa17.05■□□□□ 0.32
SUPT4H1-205ENST00000581166 CCDC85CA6NKD9 419 aa17.04■□□□□ 0.32
SUPT4H1-205ENST00000581166 PDE6AP16499 860 aa17.04■□□□□ 0.32
SUPT4H1-205ENST00000581166 ANKRD23Q86SG2 305 aa17.04■□□□□ 0.32
SUPT4H1-205ENST00000581166 FOXP4Q8IVH2 680 aaPredicted RBP17.04■□□□□ 0.32
SUPT4H1-205ENST00000581166 EDC3Q96F86 508 aaKnown RBP17.04■□□□□ 0.32
SUPT4H1-205ENST00000581166 ERO1AQ96HE7 468 aa17.04■□□□□ 0.32
SUPT4H1-205ENST00000581166 RIOK1Q9BRS2 568 aaKnown RBP17.04■□□□□ 0.32
SUPT4H1-205ENST00000581166 AFG3L2Q9Y4W6 797 aa17.04■□□□□ 0.32
SUPT4H1-205ENST00000581166 MAGEB6P1A0A0J9YX57 407 aa17.04■□□□□ 0.32
SUPT4H1-205ENST00000581166 CAP2P40123 477 aa17.04■□□□□ 0.32
SUPT4H1-205ENST00000581166 USP5P45974 858 aa17.04■□□□□ 0.32
SUPT4H1-205ENST00000581166 SP3Q02447 781 aa17.04■□□□□ 0.32
SUPT4H1-205ENST00000581166 MOGSQ13724 837 aa17.04■□□□□ 0.32
SUPT4H1-205ENST00000581166 METTL16Q86W50 562 aaKnown RBP17.04■□□□□ 0.32
SUPT4H1-205ENST00000581166 PALD1Q9ULE6 856 aa17.04■□□□□ 0.32
SUPT4H1-205ENST00000581166 PHIPQ8WWQ0 1821 aa17.03■□□□□ 0.32
SUPT4H1-205ENST00000581166 ZNF532Q9HCE3 1301 aa17.03■□□□□ 0.32
SUPT4H1-205ENST00000581166 TCRBV5S4A2TA0A5A2 114 aa17.03■□□□□ 0.32
SUPT4H1-205ENST00000581166 TLR2O60603 784 aa17.03■□□□□ 0.32
SUPT4H1-205ENST00000581166 HLA-DOAP06340 250 aa17.03■□□□□ 0.32
SUPT4H1-205ENST00000581166 ECHDC1Q9NTX5 307 aa17.03■□□□□ 0.32
SUPT4H1-205ENST00000581166 SAP30BPQ9UHR5 308 aaKnown RBP17.03■□□□□ 0.32
SUPT4H1-205ENST00000581166 ATAD5Q96QE3 1844 aa17.02■□□□□ 0.32
SUPT4H1-205ENST00000581166 MYH1P12882 1939 aa17.02■□□□□ 0.32
SUPT4H1-205ENST00000581166 A0A0G2JLL6 359 aaPredicted RBP17.02■□□□□ 0.31
SUPT4H1-205ENST00000581166 PDHXO00330 501 aa17.02■□□□□ 0.31
SUPT4H1-205ENST00000581166 RRP1BQ14684 758 aaKnown RBP17.02■□□□□ 0.31
SUPT4H1-205ENST00000581166 FBXO46Q6PJ61 603 aaPredicted RBP17.02■□□□□ 0.31
SUPT4H1-205ENST00000581166 FASTKD5Q7L8L6 764 aaKnown RBP17.02■□□□□ 0.31
SUPT4H1-205ENST00000581166 PRRT2Q7Z6L0 340 aaPredicted RBP17.02■□□□□ 0.31
SUPT4H1-205ENST00000581166 CRACR2BQ8N4Y2 399 aaPredicted RBP17.02■□□□□ 0.31
SUPT4H1-205ENST00000581166 GPATCH3Q96I76 525 aa17.02■□□□□ 0.31
SUPT4H1-205ENST00000581166 TBC1D2Q9BYX2 928 aa17.02■□□□□ 0.31
SUPT4H1-205ENST00000581166 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.02■□□□□ 0.31
SUPT4H1-205ENST00000581166 ADD2P35612 726 aa17.01■□□□□ 0.31
SUPT4H1-205ENST00000581166 GPAT2Q6NUI2 795 aa17.01■□□□□ 0.31
SUPT4H1-205ENST00000581166 CD99L2Q8TCZ2 262 aa17.01■□□□□ 0.31
SUPT4H1-205ENST00000581166 TRIM34Q9BYJ4 488 aa17.01■□□□□ 0.31
SUPT4H1-205ENST00000581166 DNAJC18Q9H819 358 aa17.01■□□□□ 0.31
SUPT4H1-205ENST00000581166 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.01■□□□□ 0.31
SUPT4H1-205ENST00000581166 TRIM17Q9Y577 477 aa17.01■□□□□ 0.31
SUPT4H1-205ENST00000581166 PTPRFP10586 1907 aa17■□□□□ 0.31
SUPT4H1-205ENST00000581166 TRIM75PA6NK02 468 aa17■□□□□ 0.31
SUPT4H1-205ENST00000581166 AAMPQ13685 434 aa17■□□□□ 0.31
SUPT4H1-205ENST00000581166 OTOP1Q7RTM1 612 aa17■□□□□ 0.31
SUPT4H1-205ENST00000581166 CCDC84Q86UT8 332 aaPredicted RBP17■□□□□ 0.31
SUPT4H1-205ENST00000581166 CRNKL1Q9BZJ0 848 aaKnown RBP17■□□□□ 0.31
SUPT4H1-205ENST00000581166 HPS5Q9UPZ3 1129 aa17■□□□□ 0.31
SUPT4H1-205ENST00000581166 USP17L5A8MUK1 530 aa16.99■□□□□ 0.31
SUPT4H1-205ENST00000581166 TTC6Q86TZ1 520 aa16.99■□□□□ 0.31
SUPT4H1-205ENST00000581166 EHD4Q9H223 541 aa16.99■□□□□ 0.31
SUPT4H1-205ENST00000581166 GINM1Q9NU53 330 aa16.99■□□□□ 0.31
SUPT4H1-205ENST00000581166 MYH7P12883 1935 aa16.98■□□□□ 0.31
SUPT4H1-205ENST00000581166 ASNSP08243 561 aa16.98■□□□□ 0.31
SUPT4H1-205ENST00000581166 ARHGEF6Q15052 776 aa16.98■□□□□ 0.31
SUPT4H1-205ENST00000581166 UBE3CQ15386 1083 aa16.98■□□□□ 0.31
SUPT4H1-205ENST00000581166 SLC4A8Q2Y0W8 1093 aa16.98■□□□□ 0.31
SUPT4H1-205ENST00000581166 ZSCAN25Q6NSZ9 544 aa16.98■□□□□ 0.31
SUPT4H1-205ENST00000581166 C17orf99Q6UX52 265 aa16.98■□□□□ 0.31
SUPT4H1-205ENST00000581166 GADL1Q6ZQY3 521 aa16.98■□□□□ 0.31
SUPT4H1-205ENST00000581166 ZNF280CQ8ND82 737 aa16.98■□□□□ 0.31
SUPT4H1-205ENST00000581166 PARK7Q99497 189 aaKnown RBP16.98■□□□□ 0.31
SUPT4H1-205ENST00000581166 EFCC1Q9HA90 598 aa16.98■□□□□ 0.31
SUPT4H1-205ENST00000581166 AS3MTQ9HBK9 375 aa16.98■□□□□ 0.31
SUPT4H1-205ENST00000581166 SERPINB13Q9UIV8 391 aa16.98■□□□□ 0.31
SUPT4H1-205ENST00000581166 SLC45A1Q9Y2W3 748 aa16.98■□□□□ 0.31
SUPT4H1-205ENST00000581166 DDX60LQ5H9U9 1706 aaKnown RBP16.98■□□□□ 0.31
SUPT4H1-205ENST00000581166 CAP1Q01518 475 aa16.97■□□□□ 0.31
SUPT4H1-205ENST00000581166 SPP2Q13103 211 aa16.97■□□□□ 0.31
SUPT4H1-205ENST00000581166 HDAC1Q13547 482 aaPredicted RBP16.97■□□□□ 0.31
SUPT4H1-205ENST00000581166 LCORLQ8N3X6 602 aa16.97■□□□□ 0.31
SUPT4H1-205ENST00000581166 PROCA1Q8NCQ7 364 aaPredicted RBP16.97■□□□□ 0.31
SUPT4H1-205ENST00000581166 TTC41PQ6P2S7 1318 aa16.97■□□□□ 0.31
SUPT4H1-205ENST00000581166 ADGRA2Q96PE1 1338 aa16.97■□□□□ 0.31
SUPT4H1-205ENST00000581166 NAV1Q8NEY1 1877 aa16.97■□□□□ 0.31
SUPT4H1-205ENST00000581166 LACTBP83111 547 aaPredicted RBP16.96■□□□□ 0.31
SUPT4H1-205ENST00000581166 KIF22Q14807 665 aa16.96■□□□□ 0.31
SUPT4H1-205ENST00000581166 SLFNL1Q499Z3 407 aa16.96■□□□□ 0.31
SUPT4H1-205ENST00000581166 TATDN1Q6P1N9 297 aa16.96■□□□□ 0.31
SUPT4H1-205ENST00000581166 WDR18Q9BV38 432 aa16.96■□□□□ 0.31
SUPT4H1-205ENST00000581166 ARMT1Q9H993 441 aa16.96■□□□□ 0.31
SUPT4H1-205ENST00000581166 DCP1AQ9NPI6 582 aaPredicted RBP16.96■□□□□ 0.31
SUPT4H1-205ENST00000581166 AGTPBP1Q9UPW5 1226 aa16.96■□□□□ 0.31
SUPT4H1-205ENST00000581166 MBD4O95243 580 aa16.96■□□□□ 0.3
SUPT4H1-205ENST00000581166 GDF11O95390 407 aa16.96■□□□□ 0.3
SUPT4H1-205ENST00000581166 POLR3DP05423 398 aaPredicted RBP16.96■□□□□ 0.3
SUPT4H1-205ENST00000581166 PLCD1P51178 756 aa16.96■□□□□ 0.3
SUPT4H1-205ENST00000581166 JAG1P78504 1218 aa16.96■□□□□ 0.3
SUPT4H1-205ENST00000581166 TSHZ3Q63HK5 1081 aa16.96■□□□□ 0.3
SUPT4H1-205ENST00000581166 KBTBD3Q8NAB2 608 aa16.96■□□□□ 0.3
SUPT4H1-205ENST00000581166 SDR42E1Q8WUS8 393 aa16.96■□□□□ 0.3
SUPT4H1-205ENST00000581166 GCC1Q96CN9 775 aa16.96■□□□□ 0.3
SUPT4H1-205ENST00000581166 MCM9Q9NXL9 1143 aa16.96■□□□□ 0.3
SUPT4H1-205ENST00000581166 CPA4Q9UI42 421 aa16.96■□□□□ 0.3
SUPT4H1-205ENST00000581166 ZBTB21Q9ULJ3 1066 aa16.96■□□□□ 0.3
SUPT4H1-205ENST00000581166 PTPN22Q9Y2R2 807 aa16.96■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms