RNA–Protein interactions for RNA: ENST00000581108.5

CSNK1D-216, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 607 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-216ENST00000581108 IGSF3O75054 1194 aa25.99■■□□□ 1.75
CSNK1D-216ENST00000581108 ECM2O94769 699 aaPredicted RBP25.99■■□□□ 1.75
CSNK1D-216ENST00000581108 CYP7A1P22680 504 aa25.99■■□□□ 1.75
CSNK1D-216ENST00000581108 DYNLL1P63167 89 aaKnown RBP25.99■■□□□ 1.75
CSNK1D-216ENST00000581108 KIF22Q14807 665 aa25.99■■□□□ 1.75
CSNK1D-216ENST00000581108 C20orf194Q5TEA3 1177 aa25.99■■□□□ 1.75
CSNK1D-216ENST00000581108 MAPKAPK5Q8IW41 473 aa25.99■■□□□ 1.75
CSNK1D-216ENST00000581108 ATAD5Q96QE3 1844 aa25.99■■□□□ 1.75
CSNK1D-216ENST00000581108 PDE4DIPQ5VU43 2346 aa25.99■■□□□ 1.75
CSNK1D-216ENST00000581108 SIPA1L1O43166 1804 aa25.98■■□□□ 1.75
CSNK1D-216ENST00000581108 ADGRA2Q96PE1 1338 aa25.98■■□□□ 1.75
CSNK1D-216ENST00000581108 TRIM75PA6NK02 468 aa25.98■■□□□ 1.75
CSNK1D-216ENST00000581108 HMMRO75330 724 aa25.98■■□□□ 1.75
CSNK1D-216ENST00000581108 CYP2C8P10632 490 aa25.98■■□□□ 1.75
CSNK1D-216ENST00000581108 RRP1BQ14684 758 aaKnown RBP25.98■■□□□ 1.75
CSNK1D-216ENST00000581108 GADL1Q6ZQY3 521 aa25.98■■□□□ 1.75
CSNK1D-216ENST00000581108 FASTKD5Q7L8L6 764 aaKnown RBP25.98■■□□□ 1.75
CSNK1D-216ENST00000581108 PI4KBQ9UBF8 816 aa25.98■■□□□ 1.75
CSNK1D-216ENST00000581108 PTCH2Q9Y6C5 1203 aa25.98■■□□□ 1.75
CSNK1D-216ENST00000581108 BCL11AQ9H165 835 aa25.97■■□□□ 1.75
CSNK1D-216ENST00000581108 DHX36Q9H2U1 1008 aaKnown RBP25.97■■□□□ 1.75
CSNK1D-216ENST00000581108 KIAA0100Q14667 2235 aaKnown RBP25.96■■□□□ 1.75
CSNK1D-216ENST00000581108 FLT1P17948 1338 aa25.96■■□□□ 1.75
CSNK1D-216ENST00000581108 CTGFP29279 349 aa25.96■■□□□ 1.75
CSNK1D-216ENST00000581108 CLASRPQ8N2M8 674 aaKnown RBP25.96■■□□□ 1.75
CSNK1D-216ENST00000581108 MAGEB6Q8N7X4 407 aa25.96■■□□□ 1.75
CSNK1D-216ENST00000581108 ARMC5Q96C12 935 aa25.96■■□□□ 1.75
CSNK1D-216ENST00000581108 KIF1BPQ96EK5 621 aa25.96■■□□□ 1.75
CSNK1D-216ENST00000581108 CHMP4BQ9H444 224 aaKnown RBP25.96■■□□□ 1.75
CSNK1D-216ENST00000581108 HERC5Q9UII4 1024 aaKnown RBP25.96■■□□□ 1.75
CSNK1D-216ENST00000581108 PALD1Q9ULE6 856 aa25.96■■□□□ 1.75
CSNK1D-216ENST00000581108 CAP2P40123 477 aa25.95■■□□□ 1.74
CSNK1D-216ENST00000581108 MIGA1Q8NAN2 632 aa25.95■■□□□ 1.74
CSNK1D-216ENST00000581108 PARK7Q99497 189 aaKnown RBP25.95■■□□□ 1.74
CSNK1D-216ENST00000581108 POTEFA5A3E0 1075 aa25.94■■□□□ 1.74
CSNK1D-216ENST00000581108 PDE3AQ14432 1141 aa25.94■■□□□ 1.74
CSNK1D-216ENST00000581108 SAP30BPQ9UHR5 308 aaKnown RBP25.94■■□□□ 1.74
CSNK1D-216ENST00000581108 MYH1P12882 1939 aa25.93■■□□□ 1.74
CSNK1D-216ENST00000581108 GNRH1P01148 92 aa25.93■■□□□ 1.74
CSNK1D-216ENST00000581108 PSMC4P43686 418 aa25.93■■□□□ 1.74
CSNK1D-216ENST00000581108 MAP3K12Q12852 859 aa25.93■■□□□ 1.74
CSNK1D-216ENST00000581108 SPP2Q13103 211 aa25.93■■□□□ 1.74
CSNK1D-216ENST00000581108 FOXP4Q8IVH2 680 aaPredicted RBP25.93■■□□□ 1.74
CSNK1D-216ENST00000581108 TRIM47Q96LD4 638 aa25.93■■□□□ 1.74
CSNK1D-216ENST00000581108 RAB11FIP3O75154 756 aa25.92■■□□□ 1.74
CSNK1D-216ENST00000581108 IFIT2P09913 472 aaKnown RBP25.92■■□□□ 1.74
CSNK1D-216ENST00000581108 BCRP11274 1271 aa25.92■■□□□ 1.74
CSNK1D-216ENST00000581108 SLC9C1Q4G0N8 1177 aa25.92■■□□□ 1.74
CSNK1D-216ENST00000581108 DNAJC18Q9H819 358 aa25.92■■□□□ 1.74
CSNK1D-216ENST00000581108 SLC45A1Q9Y2W3 748 aa25.92■■□□□ 1.74
CSNK1D-216ENST00000581108 SLC4A8Q2Y0W8 1093 aa25.91■■□□□ 1.74
CSNK1D-216ENST00000581108 METTL16Q86W50 562 aaKnown RBP25.91■■□□□ 1.74
CSNK1D-216ENST00000581108 ZNF280CQ8ND82 737 aa25.91■■□□□ 1.74
CSNK1D-216ENST00000581108 MGAMO43451 1857 aa25.91■■□□□ 1.74
CSNK1D-216ENST00000581108 RBBP6Q7Z6E9 1792 aaKnown RBP25.9■■□□□ 1.74
CSNK1D-216ENST00000581108 USP17L5A8MUK1 530 aa25.9■■□□□ 1.74
CSNK1D-216ENST00000581108 FMNL1O95466 1100 aaPredicted RBP25.9■■□□□ 1.74
CSNK1D-216ENST00000581108 JAG1P78504 1218 aa25.9■■□□□ 1.74
CSNK1D-216ENST00000581108 TREML2Q5T2D2 321 aa25.9■■□□□ 1.74
CSNK1D-216ENST00000581108 NBPF11Q86T75 865 aa25.9■■□□□ 1.74
CSNK1D-216ENST00000581108 CRACR2BQ8N4Y2 399 aaPredicted RBP25.9■■□□□ 1.74
CSNK1D-216ENST00000581108 ZNF333Q96JL9 665 aa25.9■■□□□ 1.74
CSNK1D-216ENST00000581108 AGTPBP1Q9UPW5 1226 aa25.9■■□□□ 1.74
CSNK1D-216ENST00000581108 PRMT2P55345 433 aa25.89■■□□□ 1.74
CSNK1D-216ENST00000581108 TTF1Q15361 905 aaPredicted RBP25.89■■□□□ 1.74
CSNK1D-216ENST00000581108 SH3TC2Q8TF17 1288 aa25.89■■□□□ 1.74
CSNK1D-216ENST00000581108 TRIM34Q9BYJ4 488 aa25.89■■□□□ 1.74
CSNK1D-216ENST00000581108 SRRDQ9UH36 339 aa25.89■■□□□ 1.74
CSNK1D-216ENST00000581108 BRCA2P51587 3418 aa25.89■■□□□ 1.73
CSNK1D-216ENST00000581108 OSBPP22059 807 aa25.88■■□□□ 1.73
CSNK1D-216ENST00000581108 USP5P45974 858 aa25.88■■□□□ 1.73
CSNK1D-216ENST00000581108 HMGCS2P54868 508 aa25.88■■□□□ 1.73
CSNK1D-216ENST00000581108 CERS3Q8IU89 383 aa25.88■■□□□ 1.73
CSNK1D-216ENST00000581108 PPIL4Q8WUA2 492 aaKnown RBP eCLIP25.88■■□□□ 1.73
CSNK1D-216ENST00000581108 DNAJC2Q99543 621 aaKnown RBP25.88■■□□□ 1.73
CSNK1D-216ENST00000581108 TBC1D2Q9BYX2 928 aa25.88■■□□□ 1.73
CSNK1D-216ENST00000581108 GOLIM4O00461 696 aa25.87■■□□□ 1.73
CSNK1D-216ENST00000581108 MYCP01106 439 aaPredicted RBP25.87■■□□□ 1.73
CSNK1D-216ENST00000581108 HLA-DOAP06340 250 aa25.87■■□□□ 1.73
CSNK1D-216ENST00000581108 SHROOM1Q2M3G4 852 aaPredicted RBP25.87■■□□□ 1.73
CSNK1D-216ENST00000581108 SLC9C2Q5TAH2 1124 aa25.87■■□□□ 1.73
CSNK1D-216ENST00000581108 TMED8Q6PL24 325 aaPredicted RBP25.87■■□□□ 1.73
CSNK1D-216ENST00000581108 PROCA1Q8NCQ7 364 aaPredicted RBP25.87■■□□□ 1.73
CSNK1D-216ENST00000581108 AS3MTQ9HBK9 375 aa25.87■■□□□ 1.73
CSNK1D-216ENST00000581108 LOC285556D6RIA3 1793 aa25.87■■□□□ 1.73
CSNK1D-216ENST00000581108 GDF11O95390 407 aa25.86■■□□□ 1.73
CSNK1D-216ENST00000581108 ASNSP08243 561 aa25.86■■□□□ 1.73
CSNK1D-216ENST00000581108 EN2P19622 333 aaPredicted RBP25.86■■□□□ 1.73
CSNK1D-216ENST00000581108 HOXD10P28358 340 aa25.86■■□□□ 1.73
CSNK1D-216ENST00000581108 SMCR8Q8TEV9 937 aaPredicted RBP25.86■■□□□ 1.73
CSNK1D-216ENST00000581108 EDC3Q96F86 508 aaKnown RBP25.86■■□□□ 1.73
CSNK1D-216ENST00000581108 RIOK1Q9BRS2 568 aaKnown RBP25.86■■□□□ 1.73
CSNK1D-216ENST00000581108 TMEM106CQ9BVX2 250 aa25.86■■□□□ 1.73
CSNK1D-216ENST00000581108 PDE6AP16499 860 aa25.85■■□□□ 1.73
CSNK1D-216ENST00000581108 FCGRTP55899 365 aa25.85■■□□□ 1.73
CSNK1D-216ENST00000581108 WDR18Q9BV38 432 aa25.85■■□□□ 1.73
CSNK1D-216ENST00000581108 MKI67P46013 3256 aaKnown RBP25.84■■□□□ 1.73
CSNK1D-216ENST00000581108 MAGEB6P1A0A0J9YX57 407 aa25.84■■□□□ 1.73
CSNK1D-216ENST00000581108 SH3D19Q5HYK7 790 aa25.84■■□□□ 1.73
CSNK1D-216ENST00000581108 BOLA2Q9H3K6 86 aa25.84■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms