RNA–Protein interactions for RNA: ENST00000580997.1

SENP3-204, Transcript of SUMO specific peptidase 3, humanhuman

TSL 2

Gene SENP3, Length 679 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-204ENST00000580997 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.27■□□□□ 0.04
SENP3-204ENST00000580997 SLC45A1Q9Y2W3 748 aa15.27■□□□□ 0.04
SENP3-204ENST00000580997 PRMT2P55345 433 aa15.26■□□□□ 0.03
SENP3-204ENST00000580997 KIF22Q14807 665 aa15.26■□□□□ 0.03
SENP3-204ENST00000580997 TMED8Q6PL24 325 aaPredicted RBP15.26■□□□□ 0.03
SENP3-204ENST00000580997 METTL16Q86W50 562 aaKnown RBP15.26■□□□□ 0.03
SENP3-204ENST00000580997 RPAP2Q8IXW5 612 aaPredicted RBP15.26■□□□□ 0.03
SENP3-204ENST00000580997 TEX11Q8IYF3 940 aa15.26■□□□□ 0.03
SENP3-204ENST00000580997 ZNF333Q96JL9 665 aa15.26■□□□□ 0.03
SENP3-204ENST00000580997 NOL10Q9BSC4 688 aaKnown RBP15.26■□□□□ 0.03
SENP3-204ENST00000580997 DHX36Q9H2U1 1008 aaKnown RBP15.26■□□□□ 0.03
SENP3-204ENST00000580997 PIH1D3Q9NQM4 214 aaKnown RBP15.26■□□□□ 0.03
SENP3-204ENST00000580997 ZBTB40Q9NUA8 1239 aa15.26■□□□□ 0.03
SENP3-204ENST00000580997 AATFQ9NY61 560 aaKnown RBP eCLIP15.26■□□□□ 0.03
SENP3-204ENST00000580997 PI4KBQ9UBF8 816 aa15.26■□□□□ 0.03
SENP3-204ENST00000580997 CPA4Q9UI42 421 aa15.26■□□□□ 0.03
SENP3-204ENST00000580997 HERC5Q9UII4 1024 aaKnown RBP15.26■□□□□ 0.03
SENP3-204ENST00000580997 EXOC6BQ9Y2D4 811 aa15.26■□□□□ 0.03
SENP3-204ENST00000580997 POTEFA5A3E0 1075 aa15.25■□□□□ 0.03
SENP3-204ENST00000580997 BCRP11274 1271 aa15.25■□□□□ 0.03
SENP3-204ENST00000580997 CTGFP29279 349 aa15.25■□□□□ 0.03
SENP3-204ENST00000580997 HSP90AB4PQ58FF6 505 aa15.25■□□□□ 0.03
SENP3-204ENST00000580997 NBPF11Q86T75 865 aa15.25■□□□□ 0.03
SENP3-204ENST00000580997 PARK7Q99497 189 aaKnown RBP15.25■□□□□ 0.03
SENP3-204ENST00000580997 DDX19BQ9UMR2 479 aa15.25■□□□□ 0.03
SENP3-204ENST00000580997 PTCH2Q9Y6C5 1203 aa15.25■□□□□ 0.03
SENP3-204ENST00000580997 FAM196BA6NMK8 535 aa15.24■□□□□ 0.03
SENP3-204ENST00000580997 CYP2C8P10632 490 aa15.24■□□□□ 0.03
SENP3-204ENST00000580997 CAP2P40123 477 aa15.24■□□□□ 0.03
SENP3-204ENST00000580997 RRP1BQ14684 758 aaKnown RBP15.24■□□□□ 0.03
SENP3-204ENST00000580997 SIRT2Q8IXJ6 389 aa15.24■□□□□ 0.03
SENP3-204ENST00000580997 RHPN1Q8TCX5 695 aa15.24■□□□□ 0.03
SENP3-204ENST00000580997 TBC1D2Q9BYX2 928 aa15.24■□□□□ 0.03
SENP3-204ENST00000580997 TRIM75PA6NK02 468 aa15.23■□□□□ 0.03
SENP3-204ENST00000580997 PSMC4P43686 418 aa15.23■□□□□ 0.03
SENP3-204ENST00000580997 SLC9C1Q4G0N8 1177 aa15.23■□□□□ 0.03
SENP3-204ENST00000580997 AACSQ86V21 672 aa15.23■□□□□ 0.03
SENP3-204ENST00000580997 CERS3Q8IU89 383 aa15.23■□□□□ 0.03
SENP3-204ENST00000580997 FOXP4Q8IVH2 680 aaPredicted RBP15.23■□□□□ 0.03
SENP3-204ENST00000580997 TGFBRAP1Q8WUH2 860 aa15.23■□□□□ 0.03
SENP3-204ENST00000580997 TRIM47Q96LD4 638 aa15.23■□□□□ 0.03
SENP3-204ENST00000580997 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.23■□□□□ 0.03
SENP3-204ENST00000580997 RCAN3Q9UKA8 241 aa15.23■□□□□ 0.03
SENP3-204ENST00000580997 COG6Q9Y2V7 657 aa15.23■□□□□ 0.03
SENP3-204ENST00000580997 FLT1P17948 1338 aa15.22■□□□□ 0.03
SENP3-204ENST00000580997 ZNF280CQ8ND82 737 aa15.22■□□□□ 0.03
SENP3-204ENST00000580997 CHMP4BQ9H444 224 aaKnown RBP15.22■□□□□ 0.03
SENP3-204ENST00000580997 ANTXR1Q9H6X2 564 aa15.22■□□□□ 0.03
SENP3-204ENST00000580997 SRRDQ9UH36 339 aa15.22■□□□□ 0.03
SENP3-204ENST00000580997 AGTPBP1Q9UPW5 1226 aa15.22■□□□□ 0.03
SENP3-204ENST00000580997 DOCK1Q14185 1865 aa15.22■□□□□ 0.03
SENP3-204ENST00000580997 MAST2Q6P0Q8 1798 aa15.21■□□□□ 0.03
SENP3-204ENST00000580997 USP17L5A8MUK1 530 aa15.21■□□□□ 0.03
SENP3-204ENST00000580997 IDH1O75874 414 aaKnown RBP15.21■□□□□ 0.03
SENP3-204ENST00000580997 CYP7A1P22680 504 aa15.21■□□□□ 0.03
SENP3-204ENST00000580997 HOXD10P28358 340 aa15.21■□□□□ 0.03
SENP3-204ENST00000580997 SPP2Q13103 211 aa15.21■□□□□ 0.03
SENP3-204ENST00000580997 GADL1Q6ZQY3 521 aa15.21■□□□□ 0.03
SENP3-204ENST00000580997 CCDC84Q86UT8 332 aaPredicted RBP15.21■□□□□ 0.03
SENP3-204ENST00000580997 MAPKAPK5Q8IW41 473 aa15.21■□□□□ 0.03
SENP3-204ENST00000580997 PROCA1Q8NCQ7 364 aaPredicted RBP15.21■□□□□ 0.03
SENP3-204ENST00000580997 DNAJC18Q9H819 358 aa15.21■□□□□ 0.03
SENP3-204ENST00000580997 PALD1Q9ULE6 856 aa15.21■□□□□ 0.03
SENP3-204ENST00000580997 NDUFB9Q9Y6M9 179 aa15.21■□□□□ 0.03
SENP3-204ENST00000580997 PHIPQ8WWQ0 1821 aa15.21■□□□□ 0.03
SENP3-204ENST00000580997 PDE4DIPQ5VU43 2346 aa15.2■□□□□ 0.02
SENP3-204ENST00000580997 HMMRO75330 724 aa15.2■□□□□ 0.02
SENP3-204ENST00000580997 FMNL1O95466 1100 aaPredicted RBP15.2■□□□□ 0.02
SENP3-204ENST00000580997 OSBPP22059 807 aa15.2■□□□□ 0.02
SENP3-204ENST00000580997 DYNLL1P63167 89 aaKnown RBP15.2■□□□□ 0.02
SENP3-204ENST00000580997 MAP3K12Q12852 859 aa15.2■□□□□ 0.02
SENP3-204ENST00000580997 PDE3AQ14432 1141 aa15.2■□□□□ 0.02
SENP3-204ENST00000580997 SH3D19Q5HYK7 790 aa15.2■□□□□ 0.02
SENP3-204ENST00000580997 PRPF38BQ5VTL8 546 aaKnown RBP15.2■□□□□ 0.02
SENP3-204ENST00000580997 CLASRPQ8N2M8 674 aaKnown RBP15.2■□□□□ 0.02
SENP3-204ENST00000580997 MAGEB6Q8N7X4 407 aa15.2■□□□□ 0.02
SENP3-204ENST00000580997 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.2■□□□□ 0.02
SENP3-204ENST00000580997 KIF1BPQ96EK5 621 aa15.2■□□□□ 0.02
SENP3-204ENST00000580997 WDR18Q9BV38 432 aa15.2■□□□□ 0.02
SENP3-204ENST00000580997 IL1RAPL2Q9NP60 686 aa15.2■□□□□ 0.02
SENP3-204ENST00000580997 GINM1Q9NU53 330 aa15.2■□□□□ 0.02
SENP3-204ENST00000580997 RBBP6Q7Z6E9 1792 aaKnown RBP15.2■□□□□ 0.02
SENP3-204ENST00000580997 RAB11FIP3O75154 756 aa15.19■□□□□ 0.02
SENP3-204ENST00000580997 EN2P19622 333 aaPredicted RBP15.19■□□□□ 0.02
SENP3-204ENST00000580997 JAG1P78504 1218 aa15.19■□□□□ 0.02
SENP3-204ENST00000580997 TREML2Q5T2D2 321 aa15.19■□□□□ 0.02
SENP3-204ENST00000580997 SH3TC2Q8TF17 1288 aa15.19■□□□□ 0.02
SENP3-204ENST00000580997 TMEM106CQ9BVX2 250 aa15.19■□□□□ 0.02
SENP3-204ENST00000580997 ZSWIM8A7E2V4 1837 aa15.19■□□□□ 0.02
SENP3-204ENST00000580997 PTPRFP10586 1907 aa15.18■□□□□ 0.02
SENP3-204ENST00000580997 ASNSP08243 561 aa15.18■□□□□ 0.02
SENP3-204ENST00000580997 FCGRTP55899 365 aa15.18■□□□□ 0.02
SENP3-204ENST00000580997 TTF1Q15361 905 aaPredicted RBP15.18■□□□□ 0.02
SENP3-204ENST00000580997 MIGA1Q8NAN2 632 aa15.18■□□□□ 0.02
SENP3-204ENST00000580997 SMCR8Q8TEV9 937 aaPredicted RBP15.18■□□□□ 0.02
SENP3-204ENST00000580997 AS3MTQ9HBK9 375 aa15.18■□□□□ 0.02
SENP3-204ENST00000580997 PNMA3Q9UL41 463 aa15.18■□□□□ 0.02
SENP3-204ENST00000580997 MYO5AQ9Y4I1 1855 aaKnown RBP15.18■□□□□ 0.02
SENP3-204ENST00000580997 SIPA1L1O43166 1804 aa15.17■□□□□ 0.02
SENP3-204ENST00000580997 HLA-DOAP06340 250 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms