RNA–Protein interactions for RNA: ENST00000580991.1

IFT20-211, Transcript of intraflagellar transport 20, humanhuman

TSL 4

Gene IFT20, Length 554 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-211ENST00000580991 TBC1D12O60347 775 aa18.31■□□□□ 0.52
IFT20-211ENST00000580991 COL6A1P12109 1028 aa18.31■□□□□ 0.52
IFT20-211ENST00000580991 MDM2Q00987 491 aaPredicted RBP18.31■□□□□ 0.52
IFT20-211ENST00000580991 PICALMQ13492 652 aa18.31■□□□□ 0.52
IFT20-211ENST00000580991 CCDC184Q52MB2 194 aa18.31■□□□□ 0.52
IFT20-211ENST00000580991 SLF2Q8IX21 1173 aa18.31■□□□□ 0.52
IFT20-211ENST00000580991 ZNF280CQ8ND82 737 aa18.31■□□□□ 0.52
IFT20-211ENST00000580991 TBC1D2Q9BYX2 928 aa18.31■□□□□ 0.52
IFT20-211ENST00000580991 DDX4Q9NQI0 724 aaKnown RBP18.31■□□□□ 0.52
IFT20-211ENST00000580991 PLXNB2O15031 1838 aa18.3■□□□□ 0.52
IFT20-211ENST00000580991 XRCC5P13010 732 aaKnown RBP18.3■□□□□ 0.52
IFT20-211ENST00000580991 CYP2B6P20813 491 aa18.3■□□□□ 0.52
IFT20-211ENST00000580991 HMGCS2P54868 508 aa18.3■□□□□ 0.52
IFT20-211ENST00000580991 ATP2B3Q16720 1220 aa18.3■□□□□ 0.52
IFT20-211ENST00000580991 ATG9AQ7Z3C6 839 aa18.3■□□□□ 0.52
IFT20-211ENST00000580991 OSBPL5Q9H0X9 879 aaPredicted RBP18.3■□□□□ 0.52
IFT20-211ENST00000580991 MORF4L1Q9UBU8 362 aa18.3■□□□□ 0.52
IFT20-211ENST00000580991 EYSQ5T1H1 3165 aa18.3■□□□□ 0.52
IFT20-211ENST00000580991 COL2A1P02458 1487 aaPredicted RBP18.29■□□□□ 0.52
IFT20-211ENST00000580991 RFX5P48382 616 aaPredicted RBP18.29■□□□□ 0.52
IFT20-211ENST00000580991 DZIP1Q86YF9 867 aaKnown RBP18.29■□□□□ 0.52
IFT20-211ENST00000580991 TRMT44Q8IYL2 757 aaKnown RBP18.29■□□□□ 0.52
IFT20-211ENST00000580991 SOCS4Q8WXH5 440 aa18.29■□□□□ 0.52
IFT20-211ENST00000580991 FAM163AQ96GL9 167 aaPredicted RBP18.29■□□□□ 0.52
IFT20-211ENST00000580991 NUDT12Q9BQG2 462 aa18.29■□□□□ 0.52
IFT20-211ENST00000580991 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.29■□□□□ 0.52
IFT20-211ENST00000580991 PRUNE2Q8WUY3 3088 aa18.29■□□□□ 0.52
IFT20-211ENST00000580991 ZBTB22O15209 634 aa18.28■□□□□ 0.52
IFT20-211ENST00000580991 BTDP43251 543 aa18.28■□□□□ 0.52
IFT20-211ENST00000580991 PHKA1P46020 1223 aa18.28■□□□□ 0.52
IFT20-211ENST00000580991 LRRC26Q2I0M4 334 aa18.28■□□□□ 0.52
IFT20-211ENST00000580991 FAM161BQ96MY7 647 aa18.28■□□□□ 0.52
IFT20-211ENST00000580991 USP44Q9H0E7 712 aa18.28■□□□□ 0.52
IFT20-211ENST00000580991 FBXO3Q9UK99 471 aa18.28■□□□□ 0.52
IFT20-211ENST00000580991 NPM3O75607 178 aaKnown RBP18.27■□□□□ 0.52
IFT20-211ENST00000580991 SH3D19Q5HYK7 790 aa18.27■□□□□ 0.52
IFT20-211ENST00000580991 ZNF697Q5TEC3 545 aa18.27■□□□□ 0.52
IFT20-211ENST00000580991 LBHD1Q9BQE6 289 aaPredicted RBP18.27■□□□□ 0.52
IFT20-211ENST00000580991 CEP126Q9P2H0 1117 aa18.27■□□□□ 0.52
IFT20-211ENST00000580991 FAM196BA6NMK8 535 aa18.26■□□□□ 0.51
IFT20-211ENST00000580991 USP17L5A8MUK1 530 aa18.26■□□□□ 0.51
IFT20-211ENST00000580991 CIAO1O76071 339 aa18.26■□□□□ 0.51
IFT20-211ENST00000580991 ZKSCAN1P17029 563 aaPredicted RBP18.26■□□□□ 0.51
IFT20-211ENST00000580991 IRX3P78415 501 aaPredicted RBP18.26■□□□□ 0.51
IFT20-211ENST00000580991 CACNB2Q08289 660 aaPredicted RBP18.26■□□□□ 0.51
IFT20-211ENST00000580991 PDE3AQ14432 1141 aa18.26■□□□□ 0.51
IFT20-211ENST00000580991 SPTY2D1Q68D10 685 aaPredicted RBP18.26■□□□□ 0.51
IFT20-211ENST00000580991 LHX8Q68G74 356 aa18.26■□□□□ 0.51
IFT20-211ENST00000580991 ABCF2Q9UG63 623 aa18.26■□□□□ 0.51
IFT20-211ENST00000580991 ATAD5Q96QE3 1844 aa18.26■□□□□ 0.51
IFT20-211ENST00000580991 MROH7-TTC4A0A0A0MT08 1334 aa18.25■□□□□ 0.51
IFT20-211ENST00000580991 CAP2P40123 477 aa18.25■□□□□ 0.51
IFT20-211ENST00000580991 GPRC5AQ8NFJ5 357 aa18.25■□□□□ 0.51
IFT20-211ENST00000580991 SIL1Q9H173 461 aa18.25■□□□□ 0.51
IFT20-211ENST00000580991 AS3MTQ9HBK9 375 aa18.25■□□□□ 0.51
IFT20-211ENST00000580991 PRDM6Q9NQX0 595 aa18.25■□□□□ 0.51
IFT20-211ENST00000580991 PTPRCP08575 1304 aa18.24■□□□□ 0.51
IFT20-211ENST00000580991 GPR75-ASB3A0A0A6YYF3 556 aa18.24■□□□□ 0.51
IFT20-211ENST00000580991 MAPK4P31152 587 aa18.24■□□□□ 0.51
IFT20-211ENST00000580991 RHBDL3P58872 404 aa18.24■□□□□ 0.51
IFT20-211ENST00000580991 CCDC102BQ68D86 513 aa18.24■□□□□ 0.51
IFT20-211ENST00000580991 PDS5AQ29RF7 1337 aaKnown RBP18.23■□□□□ 0.51
IFT20-211ENST00000580991 CCND3P30281 292 aaPredicted RBP18.23■□□□□ 0.51
IFT20-211ENST00000580991 HOXA7P31268 230 aaPredicted RBP18.23■□□□□ 0.51
IFT20-211ENST00000580991 RASGRF1Q13972 1273 aa18.23■□□□□ 0.51
IFT20-211ENST00000580991 CCAR1Q8IX12 1150 aaKnown RBP18.23■□□□□ 0.51
IFT20-211ENST00000580991 USP6NLQ92738 828 aa18.23■□□□□ 0.51
IFT20-211ENST00000580991 P2RX7Q99572 595 aaKnown RBP18.23■□□□□ 0.51
IFT20-211ENST00000580991 MAP4K4O95819 1239 aaPredicted RBP18.22■□□□□ 0.51
IFT20-211ENST00000580991 IL15P40933 162 aaPredicted RBP18.22■□□□□ 0.51
IFT20-211ENST00000580991 RGS2P41220 211 aa18.22■□□□□ 0.51
IFT20-211ENST00000580991 HERVK_113P62684 666 aa18.22■□□□□ 0.51
IFT20-211ENST00000580991 MRPL50Q8N5N7 158 aaKnown RBP18.22■□□□□ 0.51
IFT20-211ENST00000580991 MAFAQ8NHW3 353 aaPredicted RBP18.22■□□□□ 0.51
IFT20-211ENST00000580991 CDX2Q99626 313 aaPredicted RBP18.22■□□□□ 0.51
IFT20-211ENST00000580991 WDR18Q9BV38 432 aa18.22■□□□□ 0.51
IFT20-211ENST00000580991 TXNRD2Q9NNW7 524 aa18.22■□□□□ 0.51
IFT20-211ENST00000580991 TMOD4Q9NZQ9 345 aa18.22■□□□□ 0.51
IFT20-211ENST00000580991 BACE1P56817 501 aa18.21■□□□□ 0.51
IFT20-211ENST00000580991 MECOMQ03112 1051 aa18.21■□□□□ 0.51
IFT20-211ENST00000580991 MTMR2Q13614 643 aa18.21■□□□□ 0.51
IFT20-211ENST00000580991 CCL14Q16627 93 aa18.21■□□□□ 0.51
IFT20-211ENST00000580991 ERICH6Q7L0X2 663 aa18.21■□□□□ 0.51
IFT20-211ENST00000580991 SENP6Q9GZR1 1112 aaPredicted RBP18.21■□□□□ 0.51
IFT20-211ENST00000580991 PRKAG2Q9UGJ0 569 aa18.21■□□□□ 0.51
IFT20-211ENST00000580991 HERC5Q9UII4 1024 aaKnown RBP18.21■□□□□ 0.51
IFT20-211ENST00000580991 CDH23Q9H251 3354 aa18.21■□□□□ 0.51
IFT20-211ENST00000580991 MAST2Q6P0Q8 1798 aa18.2■□□□□ 0.5
IFT20-211ENST00000580991 PEX10O60683 326 aa18.2■□□□□ 0.5
IFT20-211ENST00000580991 ADORA1P30542 326 aa18.2■□□□□ 0.5
IFT20-211ENST00000580991 RRP1BQ14684 758 aaKnown RBP18.2■□□□□ 0.5
IFT20-211ENST00000580991 GPR142Q7Z601 462 aa18.2■□□□□ 0.5
IFT20-211ENST00000580991 APBA2Q99767 749 aa18.2■□□□□ 0.5
IFT20-211ENST00000580991 RBPJLQ9UBG7 517 aa18.2■□□□□ 0.5
IFT20-211ENST00000580991 FRMPD3Q5JV73 1810 aa18.19■□□□□ 0.5
IFT20-211ENST00000580991 C19orf81C9J6K1 198 aa18.19■□□□□ 0.5
IFT20-211ENST00000580991 ASNSP08243 561 aa18.19■□□□□ 0.5
IFT20-211ENST00000580991 ERVK-9P63128 1117 aa18.19■□□□□ 0.5
IFT20-211ENST00000580991 ERVK-24P63145 666 aa18.19■□□□□ 0.5
IFT20-211ENST00000580991 MORN1Q5T089 497 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms