RNA–Protein interactions for RNA: ENST00000580238.5

ATG13-226, Transcript of autophagy related 13, humanhuman

TSL 4

Gene ATG13, Length 624 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG13-226ENST00000580238 PI4KBQ9UBF8 816 aa20.28■□□□□ 0.84
ATG13-226ENST00000580238 SNCAIPQ9Y6H5 919 aa20.28■□□□□ 0.84
ATG13-226ENST00000580238 GJA5P36382 358 aa20.27■□□□□ 0.84
ATG13-226ENST00000580238 RRP1BQ14684 758 aaKnown RBP20.27■□□□□ 0.84
ATG13-226ENST00000580238 TICAM2Q86XR7 235 aa20.27■□□□□ 0.84
ATG13-226ENST00000580238 CNKSR2Q8WXI2 1034 aa20.27■□□□□ 0.84
ATG13-226ENST00000580238 SLC10A4Q96EP9 437 aa20.27■□□□□ 0.84
ATG13-226ENST00000580238 FAM227BQ96M60 508 aa20.27■□□□□ 0.84
ATG13-226ENST00000580238 ELP3Q9H9T3 547 aa20.27■□□□□ 0.84
ATG13-226ENST00000580238 SLC4A4Q9Y6R1 1079 aa20.27■□□□□ 0.84
ATG13-226ENST00000580238 LAMB1P07942 1786 aa20.26■□□□□ 0.83
ATG13-226ENST00000580238 A0A0D9SFI3 127 aa20.26■□□□□ 0.83
ATG13-226ENST00000580238 SDSP20132 328 aa20.26■□□□□ 0.83
ATG13-226ENST00000580238 PLCD1P51178 756 aa20.26■□□□□ 0.83
ATG13-226ENST00000580238 NOGQ13253 232 aa20.26■□□□□ 0.83
ATG13-226ENST00000580238 SPRYD7Q5W111 196 aa20.26■□□□□ 0.83
ATG13-226ENST00000580238 ATP8A2Q9NTI2 1148 aa20.26■□□□□ 0.83
ATG13-226ENST00000580238 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.26■□□□□ 0.83
ATG13-226ENST00000580238 GSG1L2A8MUP6 293 aa20.25■□□□□ 0.83
ATG13-226ENST00000580238 FOXP2O15409 715 aa20.25■□□□□ 0.83
ATG13-226ENST00000580238 CYP2D6P10635 497 aa20.25■□□□□ 0.83
ATG13-226ENST00000580238 MAP2K2P36507 400 aa20.25■□□□□ 0.83
ATG13-226ENST00000580238 NMIQ13287 307 aaPredicted RBP20.25■□□□□ 0.83
ATG13-226ENST00000580238 NOL9Q5SY16 702 aaKnown RBP20.25■□□□□ 0.83
ATG13-226ENST00000580238 CCDC129Q6ZRS4 1044 aa20.25■□□□□ 0.83
ATG13-226ENST00000580238 FOXP4Q8IVH2 680 aaPredicted RBP20.25■□□□□ 0.83
ATG13-226ENST00000580238 WNK4Q96J92 1243 aa20.25■□□□□ 0.83
ATG13-226ENST00000580238 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.25■□□□□ 0.83
ATG13-226ENST00000580238 EPB41L4AQ9HCS5 686 aaPredicted RBP20.25■□□□□ 0.83
ATG13-226ENST00000580238 MCM9Q9NXL9 1143 aa20.25■□□□□ 0.83
ATG13-226ENST00000580238 HERC5Q9UII4 1024 aaKnown RBP20.25■□□□□ 0.83
ATG13-226ENST00000580238 DOCK1Q14185 1865 aa20.24■□□□□ 0.83
ATG13-226ENST00000580238 SMIM22K7EJ46 135 aa20.24■□□□□ 0.83
ATG13-226ENST00000580238 HLA-DOAP06340 250 aa20.24■□□□□ 0.83
ATG13-226ENST00000580238 KIF23Q02241 960 aaPredicted RBP20.24■□□□□ 0.83
ATG13-226ENST00000580238 MKRN3Q13064 507 aaKnown RBP20.24■□□□□ 0.83
ATG13-226ENST00000580238 EHD4Q9H223 541 aa20.24■□□□□ 0.83
ATG13-226ENST00000580238 HELLSQ9NRZ9 838 aa20.24■□□□□ 0.83
ATG13-226ENST00000580238 CSADQ9Y600 493 aa20.24■□□□□ 0.83
ATG13-226ENST00000580238 CYP2D7A0A087X1C5 515 aa20.23■□□□□ 0.83
ATG13-226ENST00000580238 SPDYE5A6NIY4 337 aa20.23■□□□□ 0.83
ATG13-226ENST00000580238 TTC6Q86TZ1 520 aa20.23■□□□□ 0.83
ATG13-226ENST00000580238 OPTNQ96CV9 577 aa20.23■□□□□ 0.83
ATG13-226ENST00000580238 ATAD5Q96QE3 1844 aa20.23■□□□□ 0.83
ATG13-226ENST00000580238 USP17L12C9JPN9 530 aa20.22■□□□□ 0.83
ATG13-226ENST00000580238 USP17L21D6R901 530 aa20.22■□□□□ 0.83
ATG13-226ENST00000580238 POLR3DP05423 398 aaPredicted RBP20.22■□□□□ 0.83
ATG13-226ENST00000580238 ZBTB48P10074 688 aaPredicted RBP20.22■□□□□ 0.83
ATG13-226ENST00000580238 GNAT2P19087 354 aa20.22■□□□□ 0.83
ATG13-226ENST00000580238 JAG1P78504 1218 aa20.22■□□□□ 0.83
ATG13-226ENST00000580238 GABPAQ06546 454 aa20.22■□□□□ 0.83
ATG13-226ENST00000580238 CTR9Q6PD62 1173 aa20.22■□□□□ 0.83
ATG13-226ENST00000580238 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.22■□□□□ 0.83
ATG13-226ENST00000580238 SERPINB13Q9UIV8 391 aa20.22■□□□□ 0.83
ATG13-226ENST00000580238 PHIPQ8WWQ0 1821 aa20.21■□□□□ 0.83
ATG13-226ENST00000580238 CTNND1O60716 968 aaKnown RBP20.21■□□□□ 0.83
ATG13-226ENST00000580238 MCMDC2Q4G0Z9 681 aa20.21■□□□□ 0.83
ATG13-226ENST00000580238 C12orf60Q5U649 245 aa20.21■□□□□ 0.83
ATG13-226ENST00000580238 VPS53Q5VIR6 699 aa20.21■□□□□ 0.83
ATG13-226ENST00000580238 GIMAP6Q6P9H5 292 aa20.21■□□□□ 0.83
ATG13-226ENST00000580238 ZNF589Q86UQ0 364 aaPredicted RBP20.21■□□□□ 0.83
ATG13-226ENST00000580238 SCYL3Q8IZE3 742 aa20.21■□□□□ 0.83
ATG13-226ENST00000580238 CRACR2BQ8N4Y2 399 aaPredicted RBP20.21■□□□□ 0.83
ATG13-226ENST00000580238 PATL2C9JE40 543 aaKnown RBP20.2■□□□□ 0.82
ATG13-226ENST00000580238 SHMT1P34896 483 aa20.2■□□□□ 0.82
ATG13-226ENST00000580238 CAP2P40123 477 aa20.2■□□□□ 0.82
ATG13-226ENST00000580238 SHROOM1Q2M3G4 852 aaPredicted RBP20.2■□□□□ 0.82
ATG13-226ENST00000580238 TATDN1Q6P1N9 297 aa20.2■□□□□ 0.82
ATG13-226ENST00000580238 ERO1BQ86YB8 467 aa20.2■□□□□ 0.82
ATG13-226ENST00000580238 IFNL3Q8IZI9 196 aa20.2■□□□□ 0.82
ATG13-226ENST00000580238 OTUD5Q96G74 571 aa20.2■□□□□ 0.82
ATG13-226ENST00000580238 PPATQ06203 517 aa20.19■□□□□ 0.82
ATG13-226ENST00000580238 SBK1Q52WX2 424 aa20.19■□□□□ 0.82
ATG13-226ENST00000580238 CWC27Q6UX04 472 aaKnown RBP20.19■□□□□ 0.82
ATG13-226ENST00000580238 CCDC84Q86UT8 332 aaPredicted RBP20.19■□□□□ 0.82
ATG13-226ENST00000580238 DYNLL2Q96FJ2 89 aa20.19■□□□□ 0.82
ATG13-226ENST00000580238 IL25Q9H293 177 aa20.19■□□□□ 0.82
ATG13-226ENST00000580238 WBP1LQ9NX94 342 aa20.19■□□□□ 0.82
ATG13-226ENST00000580238 IRF6O14896 467 aa20.18■□□□□ 0.82
ATG13-226ENST00000580238 PTPRAP18433 802 aa20.18■□□□□ 0.82
ATG13-226ENST00000580238 PPIL2Q13356 520 aa20.18■□□□□ 0.82
ATG13-226ENST00000580238 SLC44A5Q8NCS7 719 aa20.18■□□□□ 0.82
ATG13-226ENST00000580238 DDRGK1Q96HY6 314 aa20.18■□□□□ 0.82
ATG13-226ENST00000580238 MS4A4AQ96JQ5 239 aa20.18■□□□□ 0.82
ATG13-226ENST00000580238 DIAPH3Q9NSV4 1193 aa20.18■□□□□ 0.82
ATG13-226ENST00000580238 ARPP21Q9UBL0 812 aaPredicted RBP20.18■□□□□ 0.82
ATG13-226ENST00000580238 HIP1O00291 1037 aa20.17■□□□□ 0.82
ATG13-226ENST00000580238 GDF11O95390 407 aa20.17■□□□□ 0.82
ATG13-226ENST00000580238 APPP05067 770 aa20.17■□□□□ 0.82
ATG13-226ENST00000580238 MAP2K1Q02750 393 aaPredicted RBP20.17■□□□□ 0.82
ATG13-226ENST00000580238 TRIM34Q9BYJ4 488 aa20.17■□□□□ 0.82
ATG13-226ENST00000580238 CCDC171Q6TFL3 1326 aa20.17■□□□□ 0.82
ATG13-226ENST00000580238 MYH8P13535 1937 aa20.16■□□□□ 0.82
ATG13-226ENST00000580238 TESPA1A2RU30 521 aaPredicted RBP20.16■□□□□ 0.82
ATG13-226ENST00000580238 HSPA1AP0DMV8 641 aaKnown RBP20.16■□□□□ 0.82
ATG13-226ENST00000580238 HSPA1BP0DMV9 641 aaKnown RBP20.16■□□□□ 0.82
ATG13-226ENST00000580238 CHMLP26374 656 aa20.16■□□□□ 0.82
ATG13-226ENST00000580238 TM4SF4P48230 202 aa20.16■□□□□ 0.82
ATG13-226ENST00000580238 TDO2P48775 406 aa20.16■□□□□ 0.82
ATG13-226ENST00000580238 PICK1Q9NRD5 415 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms