RNA–Protein interactions for RNA: ENST00000580104.5

TRAPPC8-207, Transcript of trafficking protein particle complex 8, humanhuman

TSL 2

Gene TRAPPC8, Length 5,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-207ENST00000580104 MCM9Q9NXL9 1143 aa15.32■□□□□ 0.04
TRAPPC8-207ENST00000580104 RPAP1Q9BWH6 1393 aaPredicted RBP15.31■□□□□ 0.04
TRAPPC8-207ENST00000580104 ADORA1P30542 326 aa15.31■□□□□ 0.04
TRAPPC8-207ENST00000580104 TTC38Q5R3I4 469 aa15.31■□□□□ 0.04
TRAPPC8-207ENST00000580104 DDX17Q92841 729 aaKnown RBP15.31■□□□□ 0.04
TRAPPC8-207ENST00000580104 NOC4LQ9BVI4 516 aaKnown RBP15.31■□□□□ 0.04
TRAPPC8-207ENST00000580104 NIP7Q9Y221 180 aaKnown RBP eCLIP15.31■□□□□ 0.04
TRAPPC8-207ENST00000580104 JAKMIP2Q96AA8 810 aa15.31■□□□□ 0.04
TRAPPC8-207ENST00000580104 SHROOM2Q13796 1616 aa15.31■□□□□ 0.04
TRAPPC8-207ENST00000580104 PI16Q6UXB8 463 aa15.31■□□□□ 0.04
TRAPPC8-207ENST00000580104 GOLPH3LQ9H4A5 285 aa15.31■□□□□ 0.04
TRAPPC8-207ENST00000580104 KMT5BQ4FZB7 885 aa15.31■□□□□ 0.04
TRAPPC8-207ENST00000580104 ANKRD18AQ8IVF6 992 aa15.31■□□□□ 0.04
TRAPPC8-207ENST00000580104 CSGALNACT2Q8N6G5 542 aa15.31■□□□□ 0.04
TRAPPC8-207ENST00000580104 DDX41Q9UJV9 622 aaKnown RBP15.31■□□□□ 0.04
TRAPPC8-207ENST00000580104 MAST3O60307 1309 aa15.3■□□□□ 0.04
TRAPPC8-207ENST00000580104 ANKRD62A6NC57 917 aa15.3■□□□□ 0.04
TRAPPC8-207ENST00000580104 GOLGA6CA6NDK9 693 aa15.3■□□□□ 0.04
TRAPPC8-207ENST00000580104 GOLGA6DP0CG33 693 aa15.3■□□□□ 0.04
TRAPPC8-207ENST00000580104 CALML3P27482 149 aa15.3■□□□□ 0.04
TRAPPC8-207ENST00000580104 SLC39A14Q15043 492 aa15.3■□□□□ 0.04
TRAPPC8-207ENST00000580104 GOLGA6AQ9NYA3 693 aa15.3■□□□□ 0.04
TRAPPC8-207ENST00000580104 ROBO2Q9HCK4 1378 aa15.3■□□□□ 0.04
TRAPPC8-207ENST00000580104 ABCA6Q8N139 1617 aa15.3■□□□□ 0.04
TRAPPC8-207ENST00000580104 TERF2Q15554 542 aa15.3■□□□□ 0.04
TRAPPC8-207ENST00000580104 LETM2Q2VYF4 491 aa15.3■□□□□ 0.04
TRAPPC8-207ENST00000580104 PLA2G4DQ86XP0 818 aa15.3■□□□□ 0.04
TRAPPC8-207ENST00000580104 CEP57Q86XR8 500 aa15.3■□□□□ 0.04
TRAPPC8-207ENST00000580104 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.3■□□□□ 0.04
TRAPPC8-207ENST00000580104 GSTTP1A0A1W2PQM5 241 aa15.3■□□□□ 0.04
TRAPPC8-207ENST00000580104 ADAMTS2O95450 1211 aa15.3■□□□□ 0.04
TRAPPC8-207ENST00000580104 GYS2P54840 703 aa15.3■□□□□ 0.04
TRAPPC8-207ENST00000580104 CFAP58Q5T655 872 aa15.3■□□□□ 0.04
TRAPPC8-207ENST00000580104 CTNNBL1Q8WYA6 563 aaPredicted RBP15.3■□□□□ 0.04
TRAPPC8-207ENST00000580104 ACSBG1Q96GR2 724 aa15.3■□□□□ 0.04
TRAPPC8-207ENST00000580104 WWC3Q9ULE0 1092 aa15.3■□□□□ 0.04
TRAPPC8-207ENST00000580104 HPDP32754 393 aaPredicted RBP15.29■□□□□ 0.04
TRAPPC8-207ENST00000580104 NELFBQ8WX92 580 aa15.29■□□□□ 0.04
TRAPPC8-207ENST00000580104 NLRP1Q9C000 1473 aa15.29■□□□□ 0.04
TRAPPC8-207ENST00000580104 M0R2C6 588 aa15.29■□□□□ 0.04
TRAPPC8-207ENST00000580104 CALM1P0DP23 149 aa15.29■□□□□ 0.04
TRAPPC8-207ENST00000580104 CALM2P0DP24 149 aa15.29■□□□□ 0.04
TRAPPC8-207ENST00000580104 CALM3P0DP25 149 aa15.29■□□□□ 0.04
TRAPPC8-207ENST00000580104 PDE4DQ08499 809 aa15.29■□□□□ 0.04
TRAPPC8-207ENST00000580104 ZMYM1Q5SVZ6 1142 aa15.29■□□□□ 0.04
TRAPPC8-207ENST00000580104 SMYD4Q8IYR2 804 aaPredicted RBP15.29■□□□□ 0.04
TRAPPC8-207ENST00000580104 IQSEC2Q5JU85 1478 aa15.29■□□□□ 0.04
TRAPPC8-207ENST00000580104 TMEM2Q9UHN6 1383 aa15.29■□□□□ 0.04
TRAPPC8-207ENST00000580104 SMIM23A6NLE4 172 aa15.29■□□□□ 0.04
TRAPPC8-207ENST00000580104 NDUFAB1O14561 156 aa15.29■□□□□ 0.04
TRAPPC8-207ENST00000580104 ZPR1O75312 459 aa15.29■□□□□ 0.04
TRAPPC8-207ENST00000580104 SND1Q7KZF4 910 aaKnown RBP eCLIP15.29■□□□□ 0.04
TRAPPC8-207ENST00000580104 PTPN12Q05209 780 aaKnown RBP15.28■□□□□ 0.04
TRAPPC8-207ENST00000580104 BRD3Q15059 726 aa15.28■□□□□ 0.04
TRAPPC8-207ENST00000580104 EPHA10Q5JZY3 1008 aa15.28■□□□□ 0.04
TRAPPC8-207ENST00000580104 EPC1Q9H2F5 836 aa15.28■□□□□ 0.04
TRAPPC8-207ENST00000580104 POLR3EQ9NVU0 708 aa15.28■□□□□ 0.04
TRAPPC8-207ENST00000580104 BICDL2A1A5D9 508 aa15.28■□□□□ 0.04
TRAPPC8-207ENST00000580104 CRACR2BQ8N4Y2 399 aaPredicted RBP15.28■□□□□ 0.04
TRAPPC8-207ENST00000580104 AK9Q5TCS8 1911 aa15.28■□□□□ 0.04
TRAPPC8-207ENST00000580104 USP6P35125 1406 aa15.28■□□□□ 0.04
TRAPPC8-207ENST00000580104 GOLGA6BA6NDN3 693 aa15.28■□□□□ 0.04
TRAPPC8-207ENST00000580104 PNMA6AP0CW24 399 aaPredicted RBP15.28■□□□□ 0.04
TRAPPC8-207ENST00000580104 OSBP2Q969R2 916 aa15.28■□□□□ 0.04
TRAPPC8-207ENST00000580104 FBXO3Q9UK99 471 aa15.28■□□□□ 0.04
TRAPPC8-207ENST00000580104 EFCAB6Q5THR3 1501 aa15.28■□□□□ 0.04
TRAPPC8-207ENST00000580104 STX10O60499 249 aa15.28■□□□□ 0.04
TRAPPC8-207ENST00000580104 IL2RBP14784 551 aa15.28■□□□□ 0.04
TRAPPC8-207ENST00000580104 KIF23Q02241 960 aaPredicted RBP15.28■□□□□ 0.04
TRAPPC8-207ENST00000580104 SPHKAPQ2M3C7 1700 aa15.28■□□□□ 0.04
TRAPPC8-207ENST00000580104 TLDC2A0PJX2 215 aa15.27■□□□□ 0.04
TRAPPC8-207ENST00000580104 BAG3O95817 575 aa15.27■□□□□ 0.04
TRAPPC8-207ENST00000580104 CASP14P31944 242 aa15.27■□□□□ 0.04
TRAPPC8-207ENST00000580104 LONRF2Q1L5Z9 754 aa15.27■□□□□ 0.04
TRAPPC8-207ENST00000580104 RGS22Q8NE09 1264 aa15.27■□□□□ 0.04
TRAPPC8-207ENST00000580104 PUM3Q15397 648 aaKnown RBP15.27■□□□□ 0.04
TRAPPC8-207ENST00000580104 AKNAD1Q5T1N1 836 aa15.27■□□□□ 0.04
TRAPPC8-207ENST00000580104 ZMYM6O95789 1325 aa15.27■□□□□ 0.04
TRAPPC8-207ENST00000580104 ENC1O14682 589 aa15.27■□□□□ 0.03
TRAPPC8-207ENST00000580104 ERCC6L2Q5T890 1561 aa15.27■□□□□ 0.03
TRAPPC8-207ENST00000580104 C8orf74Q6P047 294 aa15.27■□□□□ 0.03
TRAPPC8-207ENST00000580104 SAMSN1Q9NSI8 373 aaKnown RBP15.27■□□□□ 0.03
TRAPPC8-207ENST00000580104 E9PCH4 1651 aa15.27■□□□□ 0.03
TRAPPC8-207ENST00000580104 CHGBP05060 677 aa15.26■□□□□ 0.03
TRAPPC8-207ENST00000580104 TNNI2P48788 182 aa15.26■□□□□ 0.03
TRAPPC8-207ENST00000580104 SF3A3Q12874 501 aaKnown RBP eCLIP15.26■□□□□ 0.032e-13■□□□□ 9.2
TRAPPC8-207ENST00000580104 PARD6BQ9BYG5 372 aa15.26■□□□□ 0.03
TRAPPC8-207ENST00000580104 FAM170AA1A519 330 aa15.26■□□□□ 0.03
TRAPPC8-207ENST00000580104 TRIM14Q14142 442 aa15.26■□□□□ 0.03
TRAPPC8-207ENST00000580104 DNAJC10Q8IXB1 793 aa15.26■□□□□ 0.03
TRAPPC8-207ENST00000580104 ZNF654Q8IZM8 581 aa15.26■□□□□ 0.03
TRAPPC8-207ENST00000580104 SLC35F6Q8N357 371 aa15.26■□□□□ 0.03
TRAPPC8-207ENST00000580104 UIMC1Q96RL1 719 aa15.26■□□□□ 0.03
TRAPPC8-207ENST00000580104 ST7Q9NRC1 585 aa15.26■□□□□ 0.03
TRAPPC8-207ENST00000580104 GLI2P10070 1586 aa15.26■□□□□ 0.03
TRAPPC8-207ENST00000580104 ATP10DQ9P241 1426 aa15.26■□□□□ 0.03
TRAPPC8-207ENST00000580104 ZMYND10O75800 440 aa15.26■□□□□ 0.03
TRAPPC8-207ENST00000580104 IRX3P78415 501 aaPredicted RBP15.26■□□□□ 0.03
TRAPPC8-207ENST00000580104 SPATA5Q8NB90 893 aa15.26■□□□□ 0.03
TRAPPC8-207ENST00000580104 RABGGTAQ92696 567 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 91.8 ms