RNA–Protein interactions for RNA: ENST00000579475.7

NOTCH2-206, Transcript of notch 2, humanhuman

TSL 1 (best) BASIC

Gene NOTCH2, Length 2,954 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH2-206ENST00000579475 JRKLQ9Y4A0 524 aa9.39□□□□□ -0.91
NOTCH2-206ENST00000579475 SCN11AQ9UI33 1791 aa9.39□□□□□ -0.91
NOTCH2-206ENST00000579475 GUCY2CP25092 1073 aa9.39□□□□□ -0.91
NOTCH2-206ENST00000579475 PBX1P40424 430 aa9.39□□□□□ -0.91
NOTCH2-206ENST00000579475 FMR1Q06787 632 aaKnown RBP eCLIP9.39□□□□□ -0.91
NOTCH2-206ENST00000579475 TAF7LQ5H9L4 462 aa9.39□□□□□ -0.91
NOTCH2-206ENST00000579475 PLBD2Q8NHP8 589 aa9.39□□□□□ -0.91
NOTCH2-206ENST00000579475 APPBP2Q92624 585 aa9.39□□□□□ -0.91
NOTCH2-206ENST00000579475 CLIC6Q96NY7 704 aa9.39□□□□□ -0.91
NOTCH2-206ENST00000579475 SLC52A2Q9HAB3 445 aa9.39□□□□□ -0.91
NOTCH2-206ENST00000579475 KIF1AQ12756 1690 aa9.39□□□□□ -0.91
NOTCH2-206ENST00000579475 KDM6AO15550 1401 aaPredicted RBP9.39□□□□□ -0.91
NOTCH2-206ENST00000579475 MFAP3LO75121 409 aa9.39□□□□□ -0.91
NOTCH2-206ENST00000579475 SNRPA1P09661 255 aaKnown RBP9.39□□□□□ -0.91
NOTCH2-206ENST00000579475 VSNL1P62760 191 aa9.39□□□□□ -0.91
NOTCH2-206ENST00000579475 SPATA1Q5VX52 437 aa9.39□□□□□ -0.91
NOTCH2-206ENST00000579475 LRRC31Q6UY01 552 aa9.39□□□□□ -0.91
NOTCH2-206ENST00000579475 RAD9BQ6WBX8 426 aa9.39□□□□□ -0.91
NOTCH2-206ENST00000579475 SUGP1Q8IWZ8 645 aaKnown RBP9.39□□□□□ -0.91
NOTCH2-206ENST00000579475 IGSF22Q8N9C0 903 aa9.39□□□□□ -0.91
NOTCH2-206ENST00000579475 TMEM87BQ96K49 555 aa9.39□□□□□ -0.91
NOTCH2-206ENST00000579475 ZSWIM4Q9H7M6 989 aa9.39□□□□□ -0.91
NOTCH2-206ENST00000579475 GJB4Q9NTQ9 266 aa9.39□□□□□ -0.91
NOTCH2-206ENST00000579475 H7C1W4 665 aa9.38□□□□□ -0.91
NOTCH2-206ENST00000579475 EYA2O00167 538 aa9.38□□□□□ -0.91
NOTCH2-206ENST00000579475 FOXP2O15409 715 aa9.38□□□□□ -0.91
NOTCH2-206ENST00000579475 PTPREP23469 700 aa9.38□□□□□ -0.91
NOTCH2-206ENST00000579475 EIF5P55010 431 aaKnown RBP9.38□□□□□ -0.91
NOTCH2-206ENST00000579475 FOXO4P98177 505 aa9.38□□□□□ -0.91
NOTCH2-206ENST00000579475 TRIM14Q14142 442 aa9.38□□□□□ -0.91
NOTCH2-206ENST00000579475 RILPL1Q5EBL4 403 aa9.38□□□□□ -0.91
NOTCH2-206ENST00000579475 DNAJC21Q5F1R6 531 aaKnown RBP9.38□□□□□ -0.91
NOTCH2-206ENST00000579475 CCDC148Q8NFR7 591 aa9.38□□□□□ -0.91
NOTCH2-206ENST00000579475 RPGRIP1Q96KN7 1286 aa9.38□□□□□ -0.91
NOTCH2-206ENST00000579475 FBXO3Q9UK99 471 aa9.38□□□□□ -0.91
NOTCH2-206ENST00000579475 WWC3Q9ULE0 1092 aa9.38□□□□□ -0.91
NOTCH2-206ENST00000579475 CEP131Q9UPN4 1083 aa9.38□□□□□ -0.91
NOTCH2-206ENST00000579475 IARSP41252 1262 aaKnown RBP9.38□□□□□ -0.91
NOTCH2-206ENST00000579475 RBL2Q08999 1139 aa9.38□□□□□ -0.91
NOTCH2-206ENST00000579475 MTF1Q14872 753 aa9.38□□□□□ -0.91
NOTCH2-206ENST00000579475 SAFBQ15424 915 aaKnown RBP eCLIP9.38□□□□□ -0.91
NOTCH2-206ENST00000579475 NOSTRINQ8IVI9 506 aa9.38□□□□□ -0.91
NOTCH2-206ENST00000579475 AFAP1L1Q8TED9 768 aa9.38□□□□□ -0.91
NOTCH2-206ENST00000579475 TEX13AQ9BXU3 409 aaPredicted RBP9.38□□□□□ -0.91
NOTCH2-206ENST00000579475 IRX2Q9BZI1 471 aaPredicted RBP9.38□□□□□ -0.91
NOTCH2-206ENST00000579475 DEF6Q9H4E7 631 aa9.38□□□□□ -0.91
NOTCH2-206ENST00000579475 FAM204AQ9H8W3 233 aa9.38□□□□□ -0.91
NOTCH2-206ENST00000579475 ADD3Q9UEY8 706 aaKnown RBP9.38□□□□□ -0.91
NOTCH2-206ENST00000579475 PARP4Q9UKK3 1724 aaKnown RBP9.37□□□□□ -0.91
NOTCH2-206ENST00000579475 A0A087WUV0 522 aaPredicted RBP9.37□□□□□ -0.91
NOTCH2-206ENST00000579475 TARSL2A2RTX5 802 aaKnown RBP9.37□□□□□ -0.91
NOTCH2-206ENST00000579475 N4BP1O75113 896 aaKnown RBP9.37□□□□□ -0.91
NOTCH2-206ENST00000579475 HAND2P61296 217 aa9.37□□□□□ -0.91
NOTCH2-206ENST00000579475 TIMM10P62072 90 aa9.37□□□□□ -0.91
NOTCH2-206ENST00000579475 SF3B2Q13435 895 aaKnown RBP9.37□□□□□ -0.91
NOTCH2-206ENST00000579475 WASHC4Q2M389 1173 aa9.37□□□□□ -0.91
NOTCH2-206ENST00000579475 APTXQ7Z2E3 356 aaKnown RBP9.37□□□□□ -0.91
NOTCH2-206ENST00000579475 PACS2Q86VP3 889 aa9.37□□□□□ -0.91
NOTCH2-206ENST00000579475 SAMSN1Q9NSI8 373 aaKnown RBP9.37□□□□□ -0.91
NOTCH2-206ENST00000579475 TBC1D2BQ9UPU7 963 aa9.37□□□□□ -0.91
NOTCH2-206ENST00000579475 ECM29Q5VYK3 1845 aa9.37□□□□□ -0.91
NOTCH2-206ENST00000579475 SH2B2O14492 632 aaPredicted RBP9.37□□□□□ -0.91
NOTCH2-206ENST00000579475 ATP2B1P20020 1258 aa9.37□□□□□ -0.91
NOTCH2-206ENST00000579475 CDKAL1Q5VV42 579 aa9.37□□□□□ -0.91
NOTCH2-206ENST00000579475 APOA5Q6Q788 366 aa9.37□□□□□ -0.91
NOTCH2-206ENST00000579475 SGMS1Q86VZ5 419 aa9.37□□□□□ -0.91
NOTCH2-206ENST00000579475 SLC35F6Q8N357 371 aa9.37□□□□□ -0.91
NOTCH2-206ENST00000579475 FOXP1Q9H334 677 aaPredicted RBP9.37□□□□□ -0.91
NOTCH2-206ENST00000579475 FBXO2Q9UK22 296 aaPredicted RBP9.37□□□□□ -0.91
NOTCH2-206ENST00000579475 MYO6Q9UM54 1294 aa9.37□□□□□ -0.91
NOTCH2-206ENST00000579475 IQSEC3Q9UPP2 1182 aaPredicted RBP9.37□□□□□ -0.91
NOTCH2-206ENST00000579475 POLR2DO15514 142 aaKnown RBP9.36□□□□□ -0.91
NOTCH2-206ENST00000579475 RHOXF2BP0C7M4 288 aa9.36□□□□□ -0.91
NOTCH2-206ENST00000579475 CYP26C1Q6V0L0 522 aa9.36□□□□□ -0.91
NOTCH2-206ENST00000579475 STK11IPQ8N1F8 1099 aa9.36□□□□□ -0.91
NOTCH2-206ENST00000579475 RHOXF2Q9BQY4 288 aa9.36□□□□□ -0.91
NOTCH2-206ENST00000579475 NID2Q14112 1375 aa9.36□□□□□ -0.91
NOTCH2-206ENST00000579475 MYH8P13535 1937 aa9.36□□□□□ -0.91
NOTCH2-206ENST00000579475 FOXN1O15353 648 aa9.36□□□□□ -0.91
NOTCH2-206ENST00000579475 ZBTB43O43298 467 aa9.36□□□□□ -0.91
NOTCH2-206ENST00000579475 RNF40O75150 1001 aa9.36□□□□□ -0.91
NOTCH2-206ENST00000579475 PIP4K2AP48426 406 aaPredicted RBP9.36□□□□□ -0.91
NOTCH2-206ENST00000579475 AMPD2Q01433 879 aa9.36□□□□□ -0.91
NOTCH2-206ENST00000579475 NTRK3Q16288 839 aa9.36□□□□□ -0.91
NOTCH2-206ENST00000579475 SWT1Q5T5J6 900 aaKnown RBP9.36□□□□□ -0.91
NOTCH2-206ENST00000579475 SLC9C2Q5TAH2 1124 aa9.36□□□□□ -0.91
NOTCH2-206ENST00000579475 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.36□□□□□ -0.91
NOTCH2-206ENST00000579475 SERTAD1Q9UHV2 236 aa9.36□□□□□ -0.91
NOTCH2-206ENST00000579475 SRPRBQ9Y5M8 271 aaKnown RBP9.36□□□□□ -0.91
NOTCH2-206ENST00000579475 MYH7P12883 1935 aa9.36□□□□□ -0.91
NOTCH2-206ENST00000579475 LAMB4A4D0S4 1761 aa9.36□□□□□ -0.91
NOTCH2-206ENST00000579475 UBN2Q6ZU65 1347 aa9.36□□□□□ -0.91
NOTCH2-206ENST00000579475 SYNRGQ9UMZ2 1314 aa9.36□□□□□ -0.91
NOTCH2-206ENST00000579475 ATRNO75882 1429 aa9.36□□□□□ -0.91
NOTCH2-206ENST00000579475 LRRIQ3A6PVS8 624 aaPredicted RBP9.36□□□□□ -0.91
NOTCH2-206ENST00000579475 ACTN4O43707 911 aaKnown RBP9.36□□□□□ -0.91
NOTCH2-206ENST00000579475 SHOX2O60902 331 aaPredicted RBP9.36□□□□□ -0.91
NOTCH2-206ENST00000579475 PRPF6O94906 941 aaKnown RBP9.36□□□□□ -0.91
NOTCH2-206ENST00000579475 FKBP4Q02790 459 aaKnown RBP eCLIP9.36□□□□□ -0.91
NOTCH2-206ENST00000579475 SSRP1Q08945 709 aaKnown RBP9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms