RNA–Protein interactions for RNA: ENST00000579358.1

MKS1-208, Transcript of Meckel syndrome, type 1, humanhuman

TSL 4

Gene MKS1, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-208ENST00000579358 TRIM6-TRIM34B2RNG4 842 aa12.06□□□□□ -0.48
MKS1-208ENST00000579358 GPAA1O43292 621 aa12.06□□□□□ -0.48
MKS1-208ENST00000579358 CTNND1O60716 968 aaKnown RBP12.06□□□□□ -0.48
MKS1-208ENST00000579358 HSPA1AP0DMV8 641 aaKnown RBP12.06□□□□□ -0.48
MKS1-208ENST00000579358 HSPA1BP0DMV9 641 aaKnown RBP12.06□□□□□ -0.48
MKS1-208ENST00000579358 GNAT2P19087 354 aa12.06□□□□□ -0.48
MKS1-208ENST00000579358 SREBF2Q12772 1141 aa12.06□□□□□ -0.48
MKS1-208ENST00000579358 GIMAP6Q6P9H5 292 aa12.06□□□□□ -0.48
MKS1-208ENST00000579358 ERO1BQ86YB8 467 aa12.06□□□□□ -0.48
MKS1-208ENST00000579358 SCYL3Q8IZE3 742 aa12.06□□□□□ -0.48
MKS1-208ENST00000579358 DDRGK1Q96HY6 314 aa12.06□□□□□ -0.48
MKS1-208ENST00000579358 ZIC5Q96T25 663 aa12.06□□□□□ -0.48
MKS1-208ENST00000579358 DNAJC18Q9H819 358 aa12.06□□□□□ -0.48
MKS1-208ENST00000579358 SAP30BPQ9UHR5 308 aaKnown RBP12.06□□□□□ -0.48
MKS1-208ENST00000579358 SLC4A4Q9Y6R1 1079 aa12.06□□□□□ -0.48
MKS1-208ENST00000579358 M0R2C6 588 aa12.05□□□□□ -0.48
MKS1-208ENST00000579358 CA12O43570 354 aa12.05□□□□□ -0.48
MKS1-208ENST00000579358 PRKAB2O43741 272 aa12.05□□□□□ -0.48
MKS1-208ENST00000579358 POLR3DP05423 398 aaPredicted RBP12.05□□□□□ -0.48
MKS1-208ENST00000579358 GJA5P36382 358 aa12.05□□□□□ -0.48
MKS1-208ENST00000579358 INHBEP58166 350 aa12.05□□□□□ -0.48
MKS1-208ENST00000579358 PPATQ06203 517 aa12.05□□□□□ -0.48
MKS1-208ENST00000579358 PPIL2Q13356 520 aa12.05□□□□□ -0.48
MKS1-208ENST00000579358 TTC22Q5TAA0 569 aa12.05□□□□□ -0.48
MKS1-208ENST00000579358 CRACR2BQ8N4Y2 399 aaPredicted RBP12.05□□□□□ -0.48
MKS1-208ENST00000579358 RILPL2Q969X0 211 aa12.05□□□□□ -0.48
MKS1-208ENST00000579358 CCDC136Q96JN2 1154 aa12.05□□□□□ -0.48
MKS1-208ENST00000579358 BEGAINQ9BUH8 593 aa12.05□□□□□ -0.48
MKS1-208ENST00000579358 TRIM34Q9BYJ4 488 aa12.05□□□□□ -0.48
MKS1-208ENST00000579358 MCM9Q9NXL9 1143 aa12.05□□□□□ -0.48
MKS1-208ENST00000579358 SERPINB13Q9UIV8 391 aa12.05□□□□□ -0.48
MKS1-208ENST00000579358 DDX60LQ5H9U9 1706 aaKnown RBP12.05□□□□□ -0.48
MKS1-208ENST00000579358 TESPA1A2RU30 521 aaPredicted RBP12.04□□□□□ -0.48
MKS1-208ENST00000579358 FAM196BA6NMK8 535 aa12.04□□□□□ -0.48
MKS1-208ENST00000579358 HIP1O00291 1037 aa12.04□□□□□ -0.48
MKS1-208ENST00000579358 SLURP2P0DP57 97 aa12.04□□□□□ -0.48
MKS1-208ENST00000579358 GSPT1P15170 499 aaKnown RBP12.04□□□□□ -0.48
MKS1-208ENST00000579358 CAP2P40123 477 aa12.04□□□□□ -0.48
MKS1-208ENST00000579358 TM4SF4P48230 202 aa12.04□□□□□ -0.48
MKS1-208ENST00000579358 GABPAQ06546 454 aa12.04□□□□□ -0.48
MKS1-208ENST00000579358 MKRN3Q13064 507 aaKnown RBP12.04□□□□□ -0.48
MKS1-208ENST00000579358 AMOTL1Q8IY63 956 aa12.04□□□□□ -0.48
MKS1-208ENST00000579358 OTUD5Q96G74 571 aa12.04□□□□□ -0.48
MKS1-208ENST00000579358 TBC1D2Q9BYX2 928 aa12.04□□□□□ -0.48
MKS1-208ENST00000579358 PICK1Q9NRD5 415 aa12.04□□□□□ -0.48
MKS1-208ENST00000579358 HELLSQ9NRZ9 838 aa12.04□□□□□ -0.48
MKS1-208ENST00000579358 GINM1Q9NU53 330 aa12.04□□□□□ -0.48
MKS1-208ENST00000579358 SAGE1Q9NXZ1 904 aa12.04□□□□□ -0.48
MKS1-208ENST00000579358 ARPP21Q9UBL0 812 aaPredicted RBP12.04□□□□□ -0.48
MKS1-208ENST00000579358 OTOFQ9HC10 1997 aa12.04□□□□□ -0.48
MKS1-208ENST00000579358 FOCADQ5VW36 1801 aa12.04□□□□□ -0.48
MKS1-208ENST00000579358 GSG1L2A8MUP6 293 aa12.03□□□□□ -0.48
MKS1-208ENST00000579358 PTPRAP18433 802 aa12.03□□□□□ -0.48
MKS1-208ENST00000579358 SDSP20132 328 aa12.03□□□□□ -0.48
MKS1-208ENST00000579358 PLCD1P51178 756 aa12.03□□□□□ -0.48
MKS1-208ENST00000579358 GTF2A2P52657 109 aa12.03□□□□□ -0.48
MKS1-208ENST00000579358 SLC4A8Q2Y0W8 1093 aa12.03□□□□□ -0.48
MKS1-208ENST00000579358 SBK1Q52WX2 424 aa12.03□□□□□ -0.48
MKS1-208ENST00000579358 TATDN1Q6P1N9 297 aa12.03□□□□□ -0.48
MKS1-208ENST00000579358 CNKSR2Q8WXI2 1034 aa12.03□□□□□ -0.48
MKS1-208ENST00000579358 MS4A4AQ96JQ5 239 aa12.03□□□□□ -0.48
MKS1-208ENST00000579358 SEC62Q99442 399 aaKnown RBP12.03□□□□□ -0.48
MKS1-208ENST00000579358 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.03□□□□□ -0.48
MKS1-208ENST00000579358 KCNH4Q9UQ05 1017 aa12.03□□□□□ -0.48
MKS1-208ENST00000579358 PATL2C9JE40 543 aaKnown RBP12.02□□□□□ -0.49
MKS1-208ENST00000579358 USP17L12C9JPN9 530 aa12.02□□□□□ -0.49
MKS1-208ENST00000579358 USP17L21D6R901 530 aa12.02□□□□□ -0.49
MKS1-208ENST00000579358 IRF6O14896 467 aa12.02□□□□□ -0.49
MKS1-208ENST00000579358 ASNSP08243 561 aa12.02□□□□□ -0.49
MKS1-208ENST00000579358 SNAPC2Q13487 334 aa12.02□□□□□ -0.49
MKS1-208ENST00000579358 MCMDC2Q4G0Z9 681 aa12.02□□□□□ -0.49
MKS1-208ENST00000579358 C12orf60Q5U649 245 aa12.02□□□□□ -0.49
MKS1-208ENST00000579358 CTR9Q6PD62 1173 aa12.02□□□□□ -0.49
MKS1-208ENST00000579358 FAM227BQ96M60 508 aa12.02□□□□□ -0.49
MKS1-208ENST00000579358 NACAP1Q9BZK3 213 aa12.02□□□□□ -0.49
MKS1-208ENST00000579358 EPB41L4AQ9HCS5 686 aaPredicted RBP12.02□□□□□ -0.49
MKS1-208ENST00000579358 SWAP70Q9UH65 585 aa12.02□□□□□ -0.49
MKS1-208ENST00000579358 SIPA1L1O43166 1804 aa12.02□□□□□ -0.49
MKS1-208ENST00000579358 A0A0D9SFI3 127 aa12.01□□□□□ -0.49
MKS1-208ENST00000579358 CXCL11O14625 94 aa12.01□□□□□ -0.49
MKS1-208ENST00000579358 FOXN1O15353 648 aa12.01□□□□□ -0.49
MKS1-208ENST00000579358 ALDH1A1P00352 501 aa12.01□□□□□ -0.49
MKS1-208ENST00000579358 CYP2D6P10635 497 aa12.01□□□□□ -0.49
MKS1-208ENST00000579358 CETPP11597 493 aa12.01□□□□□ -0.49
MKS1-208ENST00000579358 CTCFP49711 727 aaPredicted RBP12.01□□□□□ -0.49
MKS1-208ENST00000579358 MFAP1P55081 439 aaKnown RBP12.01□□□□□ -0.49
MKS1-208ENST00000579358 NMIQ13287 307 aaPredicted RBP12.01□□□□□ -0.49
MKS1-208ENST00000579358 RRP1BQ14684 758 aaKnown RBP12.01□□□□□ -0.49
MKS1-208ENST00000579358 IFNL1Q8IU54 200 aa12.01□□□□□ -0.49
MKS1-208ENST00000579358 CFHR5Q9BXR6 569 aa12.01□□□□□ -0.49
MKS1-208ENST00000579358 DIAPH3Q9NSV4 1193 aa12.01□□□□□ -0.49
MKS1-208ENST00000579358 PPP4R2Q9NY27 417 aa12.01□□□□□ -0.49
MKS1-208ENST00000579358 AFG3L2Q9Y4W6 797 aa12.01□□□□□ -0.49
MKS1-208ENST00000579358 MYH7P12883 1935 aa12.01□□□□□ -0.49
MKS1-208ENST00000579358 ROBO3Q96MS0 1386 aa12.01□□□□□ -0.49
MKS1-208ENST00000579358 NAV1Q8NEY1 1877 aa12□□□□□ -0.49
MKS1-208ENST00000579358 CDK5RAP2Q96SN8 1893 aa12□□□□□ -0.49
MKS1-208ENST00000579358 CCL15-CCL14A0A0B4J2E2 113 aa12□□□□□ -0.49
MKS1-208ENST00000579358 USP17L5A8MUK1 530 aa12□□□□□ -0.49
MKS1-208ENST00000579358 APPP05067 770 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms