RNA–Protein interactions for RNA: ENST00000579007.5

GAPLINC-202, gastric adenocarcinoma associated, positive CD44 regulator, long intergenic non-coding RNA, humanhuman

TSL 3 BASIC

Gene GAPLINC, Length 643 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPLINC-202ENST00000579007 DUSP9Q99956 384 aaKnown RBP6.13□□□□□ -1.43
GAPLINC-202ENST00000579007 VPS33BQ9H267 617 aa6.13□□□□□ -1.43
GAPLINC-202ENST00000579007 SEC31BQ9NQW1 1179 aa6.13□□□□□ -1.43
GAPLINC-202ENST00000579007 KCNQ5Q9NR82 932 aa6.13□□□□□ -1.43
GAPLINC-202ENST00000579007 IFT57Q9NWB7 429 aa6.13□□□□□ -1.43
GAPLINC-202ENST00000579007 DBF4Q9UBU7 674 aaPredicted RBP6.13□□□□□ -1.43
GAPLINC-202ENST00000579007 SEPT3Q9UH03 358 aa6.13□□□□□ -1.43
GAPLINC-202ENST00000579007 PGAP2Q9UHJ9 254 aa6.13□□□□□ -1.43
GAPLINC-202ENST00000579007 FKBPLQ9UIM3 349 aa6.13□□□□□ -1.43
GAPLINC-202ENST00000579007 INPP5FQ9Y2H2 1132 aa6.13□□□□□ -1.43
GAPLINC-202ENST00000579007 PRKAB1Q9Y478 270 aa6.13□□□□□ -1.43
GAPLINC-202ENST00000579007 ASTN2O75129 1339 aaPredicted RBP6.13□□□□□ -1.43
GAPLINC-202ENST00000579007 ZSWIM8A7E2V4 1837 aa6.12□□□□□ -1.43
GAPLINC-202ENST00000579007 ADM5C9JUS6 153 aa6.12□□□□□ -1.43
GAPLINC-202ENST00000579007 IRS4O14654 1257 aaPredicted RBP6.12□□□□□ -1.43
GAPLINC-202ENST00000579007 APAF1O14727 1248 aa6.12□□□□□ -1.43
GAPLINC-202ENST00000579007 ZBTB7BO15156 539 aaPredicted RBP6.12□□□□□ -1.43
GAPLINC-202ENST00000579007 ECE2O60344 883 aa6.12□□□□□ -1.43
GAPLINC-202ENST00000579007 DNAJC6O75061 913 aa6.12□□□□□ -1.43
GAPLINC-202ENST00000579007 BBOX1O75936 387 aa6.12□□□□□ -1.43
GAPLINC-202ENST00000579007 CELF2O95319 508 aaKnown RBP6.12□□□□□ -1.43
GAPLINC-202ENST00000579007 SETQ01105 290 aaPredicted RBP6.12□□□□□ -1.43
GAPLINC-202ENST00000579007 PLCB3Q01970 1234 aa6.12□□□□□ -1.43
GAPLINC-202ENST00000579007 GRM1Q13255 1194 aa6.12□□□□□ -1.43
GAPLINC-202ENST00000579007 BMS1Q14692 1282 aaKnown RBP6.12□□□□□ -1.43
GAPLINC-202ENST00000579007 ANKRD13DQ6ZTN6 518 aa6.12□□□□□ -1.43
GAPLINC-202ENST00000579007 SAMD7Q7Z3H4 446 aa6.12□□□□□ -1.43
GAPLINC-202ENST00000579007 FILIP1Q7Z7B0 1213 aa6.12□□□□□ -1.43
GAPLINC-202ENST00000579007 ZNF654Q8IZM8 581 aa6.12□□□□□ -1.43
GAPLINC-202ENST00000579007 TSPYL6Q8N831 410 aa6.12□□□□□ -1.43
GAPLINC-202ENST00000579007 C8orf58Q8NAV2 365 aa6.12□□□□□ -1.43
GAPLINC-202ENST00000579007 HELQQ8TDG4 1101 aa6.12□□□□□ -1.43
GAPLINC-202ENST00000579007 MKL1Q969V6 931 aa6.12□□□□□ -1.43
GAPLINC-202ENST00000579007 DMRTB1Q96MA1 342 aa6.12□□□□□ -1.43
GAPLINC-202ENST00000579007 FAM161BQ96MY7 647 aa6.12□□□□□ -1.43
GAPLINC-202ENST00000579007 ZIC5Q96T25 663 aa6.12□□□□□ -1.43
GAPLINC-202ENST00000579007 MRPL42Q9Y6G3 142 aaKnown RBP6.12□□□□□ -1.43
GAPLINC-202ENST00000579007 PDE4DIPQ5VU43 2346 aa6.11□□□□□ -1.43
GAPLINC-202ENST00000579007 SSC5DA1L4H1 1573 aa6.11□□□□□ -1.43
GAPLINC-202ENST00000579007 WTIPA6NIX2 430 aaPredicted RBP6.11□□□□□ -1.43
GAPLINC-202ENST00000579007 RIMBP2O15034 1052 aa6.11□□□□□ -1.43
GAPLINC-202ENST00000579007 IGKV5-2P06315 115 aa6.11□□□□□ -1.43
GAPLINC-202ENST00000579007 ATP2B2Q01814 1243 aa6.11□□□□□ -1.43
GAPLINC-202ENST00000579007 TRIM28Q13263 835 aaKnown RBP6.11□□□□□ -1.43
GAPLINC-202ENST00000579007 DOK7Q18PE1 504 aa6.11□□□□□ -1.43
GAPLINC-202ENST00000579007 TBC1D10BQ4KMP7 808 aaPredicted RBP6.11□□□□□ -1.43
GAPLINC-202ENST00000579007 ZBTB38Q8NAP3 1195 aaPredicted RBP6.11□□□□□ -1.43
GAPLINC-202ENST00000579007 TBC1D16Q8TBP0 767 aa6.11□□□□□ -1.43
GAPLINC-202ENST00000579007 JARID2Q92833 1246 aaPredicted RBP6.11□□□□□ -1.43
GAPLINC-202ENST00000579007 TATDN2Q93075 761 aa6.11□□□□□ -1.43
GAPLINC-202ENST00000579007 TSR2Q969E8 191 aaKnown RBP6.11□□□□□ -1.43
GAPLINC-202ENST00000579007 ABHD8Q96I13 439 aa6.11□□□□□ -1.43
GAPLINC-202ENST00000579007 CCDC85AQ96PX6 553 aaPredicted RBP6.11□□□□□ -1.43
GAPLINC-202ENST00000579007 MYD88Q99836 296 aa6.11□□□□□ -1.43
GAPLINC-202ENST00000579007 ADAM33Q9BZ11 813 aa6.11□□□□□ -1.43
GAPLINC-202ENST00000579007 ZNF408Q9H9D4 720 aa6.11□□□□□ -1.43
GAPLINC-202ENST00000579007 SPC25Q9HBM1 224 aa6.11□□□□□ -1.43
GAPLINC-202ENST00000579007 GEMIN8Q9NWZ8 242 aaKnown RBP6.11□□□□□ -1.43
GAPLINC-202ENST00000579007 HYPKQ9NX55 129 aa6.11□□□□□ -1.43
GAPLINC-202ENST00000579007 GGA3Q9NZ52 723 aa6.11□□□□□ -1.43
GAPLINC-202ENST00000579007 CNOT7Q9UIV1 285 aaKnown RBP6.11□□□□□ -1.43
GAPLINC-202ENST00000579007 DDX41Q9UJV9 622 aaKnown RBP6.11□□□□□ -1.43
GAPLINC-202ENST00000579007 PCDHGA4Q9Y5G9 962 aa6.11□□□□□ -1.43
GAPLINC-202ENST00000579007 MED23Q9ULK4 1368 aa6.1□□□□□ -1.43
GAPLINC-202ENST00000579007 FAM155AB1AL88 458 aaPredicted RBP6.1□□□□□ -1.43
GAPLINC-202ENST00000579007 ELL2O00472 640 aaPredicted RBP6.1□□□□□ -1.43
GAPLINC-202ENST00000579007 MAFGO15525 162 aa6.1□□□□□ -1.43
GAPLINC-202ENST00000579007 UFL1O94874 794 aa6.1□□□□□ -1.43
GAPLINC-202ENST00000579007 PCCAP05165 728 aaPredicted RBP6.1□□□□□ -1.43
GAPLINC-202ENST00000579007 FGRP09769 529 aa6.1□□□□□ -1.43
GAPLINC-202ENST00000579007 MAP2K1Q02750 393 aaPredicted RBP6.1□□□□□ -1.43
GAPLINC-202ENST00000579007 TNIP1Q15025 636 aa6.1□□□□□ -1.43
GAPLINC-202ENST00000579007 KIF4BQ2VIQ3 1234 aa6.1□□□□□ -1.43
GAPLINC-202ENST00000579007 LYPD8Q6UX82 237 aa6.1□□□□□ -1.43
GAPLINC-202ENST00000579007 RETREG3Q86VR2 466 aa6.1□□□□□ -1.43
GAPLINC-202ENST00000579007 MCF2L2Q86YR7 1114 aa6.1□□□□□ -1.43
GAPLINC-202ENST00000579007 RPUSD2Q8IZ73 545 aaKnown RBP6.1□□□□□ -1.43
GAPLINC-202ENST00000579007 ZNF454Q8N9F8 522 aa6.1□□□□□ -1.43
GAPLINC-202ENST00000579007 PMM1Q92871 262 aa6.1□□□□□ -1.43
GAPLINC-202ENST00000579007 HHIPL1Q96JK4 782 aa6.1□□□□□ -1.43
GAPLINC-202ENST00000579007 DDX56Q9NY93 547 aaKnown RBP6.1□□□□□ -1.43
GAPLINC-202ENST00000579007 PNMA3Q9UL41 463 aa6.1□□□□□ -1.43
GAPLINC-202ENST00000579007 NSFL1CQ9UNZ2 370 aaKnown RBP6.1□□□□□ -1.43
GAPLINC-202ENST00000579007 GPSM3Q9Y4H4 160 aa6.1□□□□□ -1.43
GAPLINC-202ENST00000579007 PPP1R12AO14974 1030 aaPredicted RBP6.09□□□□□ -1.43
GAPLINC-202ENST00000579007 S100BP04271 92 aaPredicted RBP6.09□□□□□ -1.43
GAPLINC-202ENST00000579007 RPS12P25398 132 aaKnown RBP6.09□□□□□ -1.43
GAPLINC-202ENST00000579007 KLRK1P26718 216 aa6.09□□□□□ -1.43
GAPLINC-202ENST00000579007 WEE1P30291 646 aa6.09□□□□□ -1.43
GAPLINC-202ENST00000579007 ECE1P42892 770 aa6.09□□□□□ -1.43
GAPLINC-202ENST00000579007 MAPK8P45983 427 aa6.09□□□□□ -1.43
GAPLINC-202ENST00000579007 CTSWP56202 376 aa6.09□□□□□ -1.43
GAPLINC-202ENST00000579007 GNAI1P63096 354 aa6.09□□□□□ -1.43
GAPLINC-202ENST00000579007 IRX6P78412 446 aaPredicted RBP6.09□□□□□ -1.43
GAPLINC-202ENST00000579007 EHHADHQ08426 723 aa6.09□□□□□ -1.43
GAPLINC-202ENST00000579007 MTMR3Q13615 1198 aa6.09□□□□□ -1.43
GAPLINC-202ENST00000579007 CWF19L2Q2TBE0 894 aaKnown RBP6.09□□□□□ -1.43
GAPLINC-202ENST00000579007 PLEKHG4Q58EX7 1191 aa6.09□□□□□ -1.43
GAPLINC-202ENST00000579007 SPTY2D1Q68D10 685 aaPredicted RBP6.09□□□□□ -1.43
GAPLINC-202ENST00000579007 CCDC102BQ68D86 513 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms