RNA–Protein interactions for RNA: ENST00000578996.1

CDK5RAP3-211, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 566 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-211ENST00000578996 ADGRA2Q96PE1 1338 aa11.27□□□□□ -0.61
CDK5RAP3-211ENST00000578996 DOCK1Q14185 1865 aa11.27□□□□□ -0.61
CDK5RAP3-211ENST00000578996 MAST2Q6P0Q8 1798 aa11.26□□□□□ -0.61
CDK5RAP3-211ENST00000578996 BRCA2P51587 3418 aa11.26□□□□□ -0.61
CDK5RAP3-211ENST00000578996 APBB1O00213 710 aa11.26□□□□□ -0.61
CDK5RAP3-211ENST00000578996 TBC1D12O60347 775 aa11.26□□□□□ -0.61
CDK5RAP3-211ENST00000578996 NPM3O75607 178 aaKnown RBP11.26□□□□□ -0.61
CDK5RAP3-211ENST00000578996 IDH1O75874 414 aaKnown RBP11.26□□□□□ -0.61
CDK5RAP3-211ENST00000578996 PLCG2P16885 1265 aa11.26□□□□□ -0.61
CDK5RAP3-211ENST00000578996 PRMT2P55345 433 aa11.26□□□□□ -0.61
CDK5RAP3-211ENST00000578996 ADGRA1Q86SQ6 560 aa11.26□□□□□ -0.61
CDK5RAP3-211ENST00000578996 CRACR2BQ8N4Y2 399 aaPredicted RBP11.26□□□□□ -0.61
CDK5RAP3-211ENST00000578996 EAF2Q96CJ1 260 aaPredicted RBP11.26□□□□□ -0.61
CDK5RAP3-211ENST00000578996 PIH1D3Q9NQM4 214 aaKnown RBP11.26□□□□□ -0.61
CDK5RAP3-211ENST00000578996 BIN2Q9UBW5 565 aaPredicted RBP11.26□□□□□ -0.61
CDK5RAP3-211ENST00000578996 SRRDQ9UH36 339 aa11.26□□□□□ -0.61
CDK5RAP3-211ENST00000578996 NOP58Q9Y2X3 529 aaKnown RBP11.26□□□□□ -0.61
CDK5RAP3-211ENST00000578996 NDUFB9Q9Y6M9 179 aa11.26□□□□□ -0.61
CDK5RAP3-211ENST00000578996 COL2A1P02458 1487 aaPredicted RBP11.25□□□□□ -0.61
CDK5RAP3-211ENST00000578996 BCRP11274 1271 aa11.25□□□□□ -0.61
CDK5RAP3-211ENST00000578996 CYP7A1P22680 504 aa11.25□□□□□ -0.61
CDK5RAP3-211ENST00000578996 PRKCZQ05513 592 aa11.25□□□□□ -0.61
CDK5RAP3-211ENST00000578996 SPP2Q13103 211 aa11.25□□□□□ -0.61
CDK5RAP3-211ENST00000578996 TREML2Q5T2D2 321 aa11.25□□□□□ -0.61
CDK5RAP3-211ENST00000578996 AACSQ86V21 672 aa11.25□□□□□ -0.61
CDK5RAP3-211ENST00000578996 ERC1Q8IUD2 1116 aa11.25□□□□□ -0.61
CDK5RAP3-211ENST00000578996 MIGA1Q8NAN2 632 aa11.25□□□□□ -0.61
CDK5RAP3-211ENST00000578996 ZNF280CQ8ND82 737 aa11.25□□□□□ -0.61
CDK5RAP3-211ENST00000578996 DHX36Q9H2U1 1008 aaKnown RBP11.25□□□□□ -0.61
CDK5RAP3-211ENST00000578996 PI4KBQ9UBF8 816 aa11.25□□□□□ -0.61
CDK5RAP3-211ENST00000578996 SAP30BPQ9UHR5 308 aaKnown RBP11.25□□□□□ -0.61
CDK5RAP3-211ENST00000578996 HERC5Q9UII4 1024 aaKnown RBP11.25□□□□□ -0.61
CDK5RAP3-211ENST00000578996 TAOK2Q9UL54 1235 aa11.25□□□□□ -0.61
CDK5RAP3-211ENST00000578996 AGTPBP1Q9UPW5 1226 aa11.25□□□□□ -0.61
CDK5RAP3-211ENST00000578996 FLT1P17948 1338 aa11.25□□□□□ -0.61
CDK5RAP3-211ENST00000578996 USP17L5A8MUK1 530 aa11.24□□□□□ -0.61
CDK5RAP3-211ENST00000578996 SLC34A2O95436 690 aa11.24□□□□□ -0.61
CDK5RAP3-211ENST00000578996 MS4A1P11836 297 aa11.24□□□□□ -0.61
CDK5RAP3-211ENST00000578996 GRK4P32298 578 aa11.24□□□□□ -0.61
CDK5RAP3-211ENST00000578996 CAP2P40123 477 aa11.24□□□□□ -0.61
CDK5RAP3-211ENST00000578996 USP5P45974 858 aa11.24□□□□□ -0.61
CDK5RAP3-211ENST00000578996 HMGCS2P54868 508 aa11.24□□□□□ -0.61
CDK5RAP3-211ENST00000578996 DYNLL1P63167 89 aaKnown RBP11.24□□□□□ -0.61
CDK5RAP3-211ENST00000578996 RRP1BQ14684 758 aaKnown RBP11.24□□□□□ -0.61
CDK5RAP3-211ENST00000578996 MTFR1Q15390 333 aa11.24□□□□□ -0.61
CDK5RAP3-211ENST00000578996 ANKRD13CQ8N6S4 541 aa11.24□□□□□ -0.61
CDK5RAP3-211ENST00000578996 MAGEB6Q8N7X4 407 aa11.24□□□□□ -0.61
CDK5RAP3-211ENST00000578996 ZNF512BQ96KM6 892 aaPredicted RBP11.24□□□□□ -0.61
CDK5RAP3-211ENST00000578996 AS3MTQ9HBK9 375 aa11.24□□□□□ -0.61
CDK5RAP3-211ENST00000578996 IL1RAPL2Q9NP60 686 aa11.24□□□□□ -0.61
CDK5RAP3-211ENST00000578996 PNMA3Q9UL41 463 aa11.24□□□□□ -0.61
CDK5RAP3-211ENST00000578996 PALD1Q9ULE6 856 aa11.24□□□□□ -0.61
CDK5RAP3-211ENST00000578996 SLC45A1Q9Y2W3 748 aa11.24□□□□□ -0.61
CDK5RAP3-211ENST00000578996 TNPO2O14787 897 aaKnown RBP11.23□□□□□ -0.61
CDK5RAP3-211ENST00000578996 GDF11O95390 407 aa11.23□□□□□ -0.61
CDK5RAP3-211ENST00000578996 HLA-DOAP06340 250 aa11.23□□□□□ -0.61
CDK5RAP3-211ENST00000578996 PPP4CP60510 307 aa11.23□□□□□ -0.61
CDK5RAP3-211ENST00000578996 PROCA1Q8NCQ7 364 aaPredicted RBP11.23□□□□□ -0.61
CDK5RAP3-211ENST00000578996 ANTXR1Q9H6X2 564 aa11.23□□□□□ -0.61
CDK5RAP3-211ENST00000578996 GABRQQ9UN88 632 aa11.23□□□□□ -0.61
CDK5RAP3-211ENST00000578996 COG6Q9Y2V7 657 aa11.23□□□□□ -0.61
CDK5RAP3-211ENST00000578996 RBBP6Q7Z6E9 1792 aaKnown RBP11.23□□□□□ -0.61
CDK5RAP3-211ENST00000578996 UBXN2AP68543 259 aa11.22□□□□□ -0.61
CDK5RAP3-211ENST00000578996 MAP3K12Q12852 859 aa11.22□□□□□ -0.61
CDK5RAP3-211ENST00000578996 PABPC4Q13310 644 aaKnown RBP eCLIP11.22□□□□□ -0.612e-7■■■□□ 15.2
CDK5RAP3-211ENST00000578996 MTMR2Q13614 643 aa11.22□□□□□ -0.61
CDK5RAP3-211ENST00000578996 HSP90AB4PQ58FF6 505 aa11.22□□□□□ -0.61
CDK5RAP3-211ENST00000578996 RHPN1Q8TCX5 695 aa11.22□□□□□ -0.61
CDK5RAP3-211ENST00000578996 TBC1D2Q9BYX2 928 aa11.22□□□□□ -0.61
CDK5RAP3-211ENST00000578996 PHIPQ8WWQ0 1821 aa11.21□□□□□ -0.61
CDK5RAP3-211ENST00000578996 MKI67P46013 3256 aaKnown RBP11.21□□□□□ -0.61
CDK5RAP3-211ENST00000578996 HMMRO75330 724 aa11.21□□□□□ -0.61
CDK5RAP3-211ENST00000578996 ASNSP08243 561 aa11.21□□□□□ -0.61
CDK5RAP3-211ENST00000578996 CCL5P13501 91 aa11.21□□□□□ -0.61
CDK5RAP3-211ENST00000578996 FLT3LGP49771 235 aa11.21□□□□□ -0.61
CDK5RAP3-211ENST00000578996 SHROOM1Q2M3G4 852 aaPredicted RBP11.21□□□□□ -0.61
CDK5RAP3-211ENST00000578996 CLASRPQ8N2M8 674 aaKnown RBP11.21□□□□□ -0.61
CDK5RAP3-211ENST00000578996 SLAIN1Q8ND83 568 aa11.21□□□□□ -0.61
CDK5RAP3-211ENST00000578996 COA7Q96BR5 231 aa11.21□□□□□ -0.61
CDK5RAP3-211ENST00000578996 DNAJC2Q99543 621 aaKnown RBP11.21□□□□□ -0.61
CDK5RAP3-211ENST00000578996 RNF208Q9H0X6 261 aa11.21□□□□□ -0.61
CDK5RAP3-211ENST00000578996 DNAJC18Q9H819 358 aa11.21□□□□□ -0.61
CDK5RAP3-211ENST00000578996 TMOD4Q9NZQ9 345 aa11.21□□□□□ -0.61
CDK5RAP3-211ENST00000578996 DDX19BQ9UMR2 479 aa11.21□□□□□ -0.61
CDK5RAP3-211ENST00000578996 ATAD5Q96QE3 1844 aa11.21□□□□□ -0.62
CDK5RAP3-211ENST00000578996 ADCY3O60266 1144 aa11.2□□□□□ -0.62
CDK5RAP3-211ENST00000578996 IGSF3O75054 1194 aa11.2□□□□□ -0.62
CDK5RAP3-211ENST00000578996 IFIT2P09913 472 aaKnown RBP11.2□□□□□ -0.62
CDK5RAP3-211ENST00000578996 ELNP15502 786 aa11.2□□□□□ -0.62
CDK5RAP3-211ENST00000578996 IRX3P78415 501 aaPredicted RBP11.2□□□□□ -0.62
CDK5RAP3-211ENST00000578996 JAG1P78504 1218 aa11.2□□□□□ -0.62
CDK5RAP3-211ENST00000578996 FAM110CQ1W6H9 321 aa11.2□□□□□ -0.62
CDK5RAP3-211ENST00000578996 FOXP4Q8IVH2 680 aaPredicted RBP11.2□□□□□ -0.62
CDK5RAP3-211ENST00000578996 GCC1Q96CN9 775 aa11.2□□□□□ -0.62
CDK5RAP3-211ENST00000578996 KIF1BPQ96EK5 621 aa11.2□□□□□ -0.62
CDK5RAP3-211ENST00000578996 ASCC2Q9H1I8 757 aaPredicted RBP11.2□□□□□ -0.62
CDK5RAP3-211ENST00000578996 ZBTB21Q9ULJ3 1066 aa11.2□□□□□ -0.62
CDK5RAP3-211ENST00000578996 PTPRFP10586 1907 aa11.19□□□□□ -0.62
CDK5RAP3-211ENST00000578996 MYO5AQ9Y4I1 1855 aaKnown RBP11.19□□□□□ -0.62
CDK5RAP3-211ENST00000578996 PDE4DIPQ5VU43 2346 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms