RNA–Protein interactions for RNA: ENST00000578958.1

SLC9A3R1-203, Transcript of SLC9A3 regulator 1, humanhuman

TSL 2

Gene SLC9A3R1, Length 714 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC9A3R1-203ENST00000578958 BCL11AQ9H165 835 aa21.4■■□□□ 1.02
SLC9A3R1-203ENST00000578958 HERC5Q9UII4 1024 aaKnown RBP21.4■■□□□ 1.02
SLC9A3R1-203ENST00000578958 DDX19BQ9UMR2 479 aa21.4■■□□□ 1.02
SLC9A3R1-203ENST00000578958 COL2A1P02458 1487 aaPredicted RBP21.39■■□□□ 1.02
SLC9A3R1-203ENST00000578958 HMMRO75330 724 aa21.39■■□□□ 1.01
SLC9A3R1-203ENST00000578958 CYP7A1P22680 504 aa21.39■■□□□ 1.01
SLC9A3R1-203ENST00000578958 PPP4CP60510 307 aa21.39■■□□□ 1.01
SLC9A3R1-203ENST00000578958 MAPKAPK5Q8IW41 473 aa21.39■■□□□ 1.01
SLC9A3R1-203ENST00000578958 RAET1EQ8TD07 263 aa21.39■■□□□ 1.01
SLC9A3R1-203ENST00000578958 ZNF333Q96JL9 665 aa21.39■■□□□ 1.01
SLC9A3R1-203ENST00000578958 PIH1D3Q9NQM4 214 aaKnown RBP21.39■■□□□ 1.01
SLC9A3R1-203ENST00000578958 APBB1O00213 710 aa21.38■■□□□ 1.01
SLC9A3R1-203ENST00000578958 FCGRTP55899 365 aa21.38■■□□□ 1.01
SLC9A3R1-203ENST00000578958 CCDC84Q86UT8 332 aaPredicted RBP21.38■■□□□ 1.01
SLC9A3R1-203ENST00000578958 TBC1D2Q9BYX2 928 aa21.38■■□□□ 1.01
SLC9A3R1-203ENST00000578958 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.38■■□□□ 1.01
SLC9A3R1-203ENST00000578958 COG6Q9Y2V7 657 aa21.38■■□□□ 1.01
SLC9A3R1-203ENST00000578958 SLC45A1Q9Y2W3 748 aa21.38■■□□□ 1.01
SLC9A3R1-203ENST00000578958 HTTP42858 3142 aa21.38■■□□□ 1.01
SLC9A3R1-203ENST00000578958 HLA-DOAP06340 250 aa21.37■■□□□ 1.01
SLC9A3R1-203ENST00000578958 CAP2P40123 477 aa21.37■■□□□ 1.01
SLC9A3R1-203ENST00000578958 MAP3K12Q12852 859 aa21.37■■□□□ 1.01
SLC9A3R1-203ENST00000578958 PRPF38BQ5VTL8 546 aaKnown RBP21.37■■□□□ 1.01
SLC9A3R1-203ENST00000578958 CERS3Q8IU89 383 aa21.37■■□□□ 1.01
SLC9A3R1-203ENST00000578958 RPAP2Q8IXW5 612 aaPredicted RBP21.37■■□□□ 1.01
SLC9A3R1-203ENST00000578958 ZNF280CQ8ND82 737 aa21.37■■□□□ 1.01
SLC9A3R1-203ENST00000578958 SH3TC2Q8TF17 1288 aa21.37■■□□□ 1.01
SLC9A3R1-203ENST00000578958 TRIM47Q96LD4 638 aa21.37■■□□□ 1.01
SLC9A3R1-203ENST00000578958 AS3MTQ9HBK9 375 aa21.37■■□□□ 1.01
SLC9A3R1-203ENST00000578958 IL1RAPL2Q9NP60 686 aa21.37■■□□□ 1.01
SLC9A3R1-203ENST00000578958 SRRDQ9UH36 339 aa21.37■■□□□ 1.01
SLC9A3R1-203ENST00000578958 RCAN3Q9UKA8 241 aa21.37■■□□□ 1.01
SLC9A3R1-203ENST00000578958 PNMA3Q9UL41 463 aa21.37■■□□□ 1.01
SLC9A3R1-203ENST00000578958 DOCK1Q14185 1865 aa21.37■■□□□ 1.01
SLC9A3R1-203ENST00000578958 FLT1P17948 1338 aa21.36■■□□□ 1.01
SLC9A3R1-203ENST00000578958 ADGRA2Q96PE1 1338 aa21.36■■□□□ 1.01
SLC9A3R1-203ENST00000578958 USP17L5A8MUK1 530 aa21.36■■□□□ 1.01
SLC9A3R1-203ENST00000578958 EN2P19622 333 aaPredicted RBP21.36■■□□□ 1.01
SLC9A3R1-203ENST00000578958 OSBPP22059 807 aa21.36■■□□□ 1.01
SLC9A3R1-203ENST00000578958 SPP2Q13103 211 aa21.36■■□□□ 1.01
SLC9A3R1-203ENST00000578958 ADGRA1Q86SQ6 560 aa21.36■■□□□ 1.01
SLC9A3R1-203ENST00000578958 CLASRPQ8N2M8 674 aaKnown RBP21.36■■□□□ 1.01
SLC9A3R1-203ENST00000578958 MAGEB6Q8N7X4 407 aa21.36■■□□□ 1.01
SLC9A3R1-203ENST00000578958 AGTPBP1Q9UPW5 1226 aa21.36■■□□□ 1.01
SLC9A3R1-203ENST00000578958 MYPNQ86TC9 1320 aa21.35■■□□□ 1.01
SLC9A3R1-203ENST00000578958 USP5P45974 858 aa21.35■■□□□ 1.01
SLC9A3R1-203ENST00000578958 PABPC4Q13310 644 aaKnown RBP eCLIP21.35■■□□□ 1.01
SLC9A3R1-203ENST00000578958 FOXP4Q8IVH2 680 aaPredicted RBP21.35■■□□□ 1.01
SLC9A3R1-203ENST00000578958 RHPN1Q8TCX5 695 aa21.35■■□□□ 1.01
SLC9A3R1-203ENST00000578958 BIN2Q9UBW5 565 aaPredicted RBP21.35■■□□□ 1.01
SLC9A3R1-203ENST00000578958 SAP30BPQ9UHR5 308 aaKnown RBP21.35■■□□□ 1.01
SLC9A3R1-203ENST00000578958 CENPFP49454 3210 aa21.35■■□□□ 1.01
SLC9A3R1-203ENST00000578958 PDE4DIPQ5VU43 2346 aa21.35■■□□□ 1.01
SLC9A3R1-203ENST00000578958 MAST2Q6P0Q8 1798 aa21.35■■□□□ 1.01
SLC9A3R1-203ENST00000578958 IFIT2P09913 472 aaKnown RBP21.34■■□□□ 1.01
SLC9A3R1-203ENST00000578958 BCRP11274 1271 aa21.34■■□□□ 1.01
SLC9A3R1-203ENST00000578958 DYNLL1P63167 89 aaKnown RBP21.34■■□□□ 1.01
SLC9A3R1-203ENST00000578958 MIGA1Q8NAN2 632 aa21.34■■□□□ 1.01
SLC9A3R1-203ENST00000578958 PROCA1Q8NCQ7 364 aaPredicted RBP21.34■■□□□ 1.01
SLC9A3R1-203ENST00000578958 KIF1BPQ96EK5 621 aa21.34■■□□□ 1.01
SLC9A3R1-203ENST00000578958 PALD1Q9ULE6 856 aa21.34■■□□□ 1.01
SLC9A3R1-203ENST00000578958 NDUFB9Q9Y6M9 179 aa21.34■■□□□ 1.01
SLC9A3R1-203ENST00000578958 ASNSP08243 561 aa21.33■■□□□ 1.01
SLC9A3R1-203ENST00000578958 TTF1Q15361 905 aaPredicted RBP21.33■■□□□ 1.01
SLC9A3R1-203ENST00000578958 CTGFP29279 349 aa21.32■■□□□ 1
SLC9A3R1-203ENST00000578958 GRK4P32298 578 aa21.32■■□□□ 1
SLC9A3R1-203ENST00000578958 HMGCS2P54868 508 aa21.32■■□□□ 1
SLC9A3R1-203ENST00000578958 TMED8Q6PL24 325 aaPredicted RBP21.32■■□□□ 1
SLC9A3R1-203ENST00000578958 TMOD4Q9NZQ9 345 aa21.32■■□□□ 1
SLC9A3R1-203ENST00000578958 TNPO2O14787 897 aaKnown RBP21.31■■□□□ 1
SLC9A3R1-203ENST00000578958 RAB11FIP3O75154 756 aa21.31■■□□□ 1
SLC9A3R1-203ENST00000578958 TREML2Q5T2D2 321 aa21.31■■□□□ 1
SLC9A3R1-203ENST00000578958 ANKRD13CQ8N6S4 541 aa21.31■■□□□ 1
SLC9A3R1-203ENST00000578958 ANTXR1Q9H6X2 564 aa21.31■■□□□ 1
SLC9A3R1-203ENST00000578958 ZBTB40Q9NUA8 1239 aa21.31■■□□□ 1
SLC9A3R1-203ENST00000578958 ZSWIM8A7E2V4 1837 aa21.31■■□□□ 1
SLC9A3R1-203ENST00000578958 UBXN2AP68543 259 aa21.3■■□□□ 1
SLC9A3R1-203ENST00000578958 PRKCZQ05513 592 aa21.3■■□□□ 1
SLC9A3R1-203ENST00000578958 RRP1BQ14684 758 aaKnown RBP21.3■■□□□ 1
SLC9A3R1-203ENST00000578958 DNAJC2Q99543 621 aaKnown RBP21.3■■□□□ 1
SLC9A3R1-203ENST00000578958 GINM1Q9NU53 330 aa21.3■■□□□ 1
SLC9A3R1-203ENST00000578958 GDF11O95390 407 aa21.29■■□□□ 1
SLC9A3R1-203ENST00000578958 MTMR2Q13614 643 aa21.29■■□□□ 1
SLC9A3R1-203ENST00000578958 COA7Q96BR5 231 aa21.29■■□□□ 1
SLC9A3R1-203ENST00000578958 TAOK2Q9UL54 1235 aa21.29■■□□□ 1
SLC9A3R1-203ENST00000578958 KIAA0100Q14667 2235 aaKnown RBP21.29■■□□□ 1
SLC9A3R1-203ENST00000578958 PHIPQ8WWQ0 1821 aa21.28■■□□□ 1
SLC9A3R1-203ENST00000578958 GCLCP48506 637 aaPredicted RBP21.28■■□□□ 1
SLC9A3R1-203ENST00000578958 IRX3P78415 501 aaPredicted RBP21.28■■□□□ 1
SLC9A3R1-203ENST00000578958 TTC6Q86TZ1 520 aa21.28■■□□□ 1
SLC9A3R1-203ENST00000578958 SLAIN1Q8ND83 568 aa21.28■■□□□ 1
SLC9A3R1-203ENST00000578958 WDR18Q9BV38 432 aa21.28■■□□□ 1
SLC9A3R1-203ENST00000578958 MYO5AQ9Y4I1 1855 aaKnown RBP21.27■■□□□ 1
SLC9A3R1-203ENST00000578958 MAGEB6P1A0A0J9YX57 407 aa21.27■■□□□ 1
SLC9A3R1-203ENST00000578958 GOLIM4O00461 696 aa21.27■■□□□ 1
SLC9A3R1-203ENST00000578958 BACE1P56817 501 aa21.27■■□□□ 1
SLC9A3R1-203ENST00000578958 SH3D19Q5HYK7 790 aa21.27■■□□□ 1
SLC9A3R1-203ENST00000578958 SLC9C2Q5TAH2 1124 aa21.27■■□□□ 1
SLC9A3R1-203ENST00000578958 METTL16Q86W50 562 aaKnown RBP21.27■■□□□ 1
SLC9A3R1-203ENST00000578958 GABRQQ9UN88 632 aa21.27■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms