RNA–Protein interactions for RNA: ENST00000578733.5

CDK5RAP3-210, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 578 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-210ENST00000578733 DOCK1Q14185 1865 aa13.42□□□□□ -0.26
CDK5RAP3-210ENST00000578733 RASSF10A6NK89 507 aa13.41□□□□□ -0.26
CDK5RAP3-210ENST00000578733 MINDY4BA8MYZ0 360 aa13.41□□□□□ -0.26
CDK5RAP3-210ENST00000578733 USP17L12C9JPN9 530 aa13.41□□□□□ -0.26
CDK5RAP3-210ENST00000578733 USP17L21D6R901 530 aa13.41□□□□□ -0.26
CDK5RAP3-210ENST00000578733 ZNF213O14771 459 aa13.41□□□□□ -0.26
CDK5RAP3-210ENST00000578733 PPP1R12BO60237 982 aaPredicted RBP13.41□□□□□ -0.26
CDK5RAP3-210ENST00000578733 ITGBL1O95965 494 aaPredicted RBP13.41□□□□□ -0.26
CDK5RAP3-210ENST00000578733 FGAP02671 866 aa13.41□□□□□ -0.26
CDK5RAP3-210ENST00000578733 VPS53Q5VIR6 699 aa13.41□□□□□ -0.26
CDK5RAP3-210ENST00000578733 MAP1SQ66K74 1059 aaPredicted RBP13.41□□□□□ -0.26
CDK5RAP3-210ENST00000578733 FOXP4Q8IVH2 680 aaPredicted RBP13.41□□□□□ -0.26
CDK5RAP3-210ENST00000578733 GLIS2Q9BZE0 524 aaPredicted RBP13.41□□□□□ -0.26
CDK5RAP3-210ENST00000578733 HERC5Q9UII4 1024 aaKnown RBP13.41□□□□□ -0.26
CDK5RAP3-210ENST00000578733 PAPPA2Q9BXP8 1791 aa13.4□□□□□ -0.26
CDK5RAP3-210ENST00000578733 OTOFQ9HC10 1997 aa13.4□□□□□ -0.26
CDK5RAP3-210ENST00000578733 ADM5C9JUS6 153 aa13.4□□□□□ -0.26
CDK5RAP3-210ENST00000578733 HSPA8P11142 646 aaKnown RBP13.4□□□□□ -0.26
CDK5RAP3-210ENST00000578733 NT5C2P49902 561 aa13.4□□□□□ -0.26
CDK5RAP3-210ENST00000578733 PDE4BQ07343 736 aa13.4□□□□□ -0.26
CDK5RAP3-210ENST00000578733 DEFB115Q30KQ5 88 aa13.4□□□□□ -0.26
CDK5RAP3-210ENST00000578733 C8orf34Q49A92 452 aa13.4□□□□□ -0.26
CDK5RAP3-210ENST00000578733 C12orf60Q5U649 245 aa13.4□□□□□ -0.26
CDK5RAP3-210ENST00000578733 CTR9Q6PD62 1173 aa13.4□□□□□ -0.26
CDK5RAP3-210ENST00000578733 MAP4K1Q92918 833 aa13.4□□□□□ -0.26
CDK5RAP3-210ENST00000578733 CDCA5Q96FF9 252 aa13.4□□□□□ -0.26
CDK5RAP3-210ENST00000578733 LSG1Q9H089 658 aaKnown RBP13.4□□□□□ -0.26
CDK5RAP3-210ENST00000578733 EHD4Q9H223 541 aa13.4□□□□□ -0.26
CDK5RAP3-210ENST00000578733 IL25Q9H293 177 aa13.4□□□□□ -0.26
CDK5RAP3-210ENST00000578733 RNF41Q9H4P4 317 aaPredicted RBP13.4□□□□□ -0.26
CDK5RAP3-210ENST00000578733 EPB41L4AQ9HCS5 686 aaPredicted RBP13.4□□□□□ -0.26
CDK5RAP3-210ENST00000578733 SWAP70Q9UH65 585 aa13.4□□□□□ -0.26
CDK5RAP3-210ENST00000578733 SERPINB13Q9UIV8 391 aa13.4□□□□□ -0.26
CDK5RAP3-210ENST00000578733 PALD1Q9ULE6 856 aa13.4□□□□□ -0.26
CDK5RAP3-210ENST00000578733 DDTLA6NHG4 134 aaPredicted RBP13.39□□□□□ -0.27
CDK5RAP3-210ENST00000578733 TBC1D12O60347 775 aa13.39□□□□□ -0.27
CDK5RAP3-210ENST00000578733 PCP11498 1178 aaKnown RBP13.39□□□□□ -0.27
CDK5RAP3-210ENST00000578733 ZKSCAN1P17029 563 aaPredicted RBP13.39□□□□□ -0.27
CDK5RAP3-210ENST00000578733 MLLT1Q03111 559 aaPredicted RBP13.39□□□□□ -0.27
CDK5RAP3-210ENST00000578733 PPARAQ07869 468 aa13.39□□□□□ -0.27
CDK5RAP3-210ENST00000578733 ZNF341Q9BYN7 854 aa13.39□□□□□ -0.27
CDK5RAP3-210ENST00000578733 RBM8AQ9Y5S9 174 aaKnown RBP13.39□□□□□ -0.27
CDK5RAP3-210ENST00000578733 ROBO3Q96MS0 1386 aa13.39□□□□□ -0.27
CDK5RAP3-210ENST00000578733 MYH4Q9Y623 1939 aa13.39□□□□□ -0.27
CDK5RAP3-210ENST00000578733 IREB2P48200 963 aaKnown RBP13.38□□□□□ -0.27
CDK5RAP3-210ENST00000578733 RGS19P49795 217 aa13.38□□□□□ -0.27
CDK5RAP3-210ENST00000578733 PTH1RQ03431 593 aa13.38□□□□□ -0.27
CDK5RAP3-210ENST00000578733 TRDNQ13061 729 aa13.38□□□□□ -0.27
CDK5RAP3-210ENST00000578733 TTLL12Q14166 644 aaPredicted RBP13.38□□□□□ -0.27
CDK5RAP3-210ENST00000578733 NBPF12Q5TAG4 269 aaPredicted RBP13.38□□□□□ -0.27
CDK5RAP3-210ENST00000578733 ARMC9Q7Z3E5 817 aa13.38□□□□□ -0.27
CDK5RAP3-210ENST00000578733 ZFPM1Q8IX07 1006 aa13.38□□□□□ -0.27
CDK5RAP3-210ENST00000578733 TEPSINQ96N21 525 aa13.38□□□□□ -0.27
CDK5RAP3-210ENST00000578733 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.38□□□□□ -0.27
CDK5RAP3-210ENST00000578733 MKNK2Q9HBH9 465 aa13.38□□□□□ -0.27
CDK5RAP3-210ENST00000578733 ANAPC4Q9UJX5 808 aa13.38□□□□□ -0.27
CDK5RAP3-210ENST00000578733 SCAF8Q9UPN6 1271 aaKnown RBP13.38□□□□□ -0.27
CDK5RAP3-210ENST00000578733 FKBP1BP68106 108 aa13.37□□□□□ -0.27
CDK5RAP3-210ENST00000578733 KRT32Q14532 448 aa13.37□□□□□ -0.27
CDK5RAP3-210ENST00000578733 SLC4A8Q2Y0W8 1093 aa13.37□□□□□ -0.27
CDK5RAP3-210ENST00000578733 MFSD6Q6ZSS7 791 aa13.37□□□□□ -0.27
CDK5RAP3-210ENST00000578733 SH3BP5LQ7L8J4 393 aa13.37□□□□□ -0.27
CDK5RAP3-210ENST00000578733 BEGAINQ9BUH8 593 aa13.37□□□□□ -0.27
CDK5RAP3-210ENST00000578733 CNNM2Q9H8M5 875 aa13.37□□□□□ -0.27
CDK5RAP3-210ENST00000578733 WDR33Q9C0J8 1336 aaKnown RBP13.37□□□□□ -0.27
CDK5RAP3-210ENST00000578733 FOXP2O15409 715 aa13.36□□□□□ -0.27
CDK5RAP3-210ENST00000578733 PLCD1P51178 756 aa13.36□□□□□ -0.27
CDK5RAP3-210ENST00000578733 C16orf86Q6ZW13 317 aa13.36□□□□□ -0.27
CDK5RAP3-210ENST00000578733 C2orf69Q8N8R5 385 aa13.36□□□□□ -0.27
CDK5RAP3-210ENST00000578733 BACH2Q9BYV9 841 aa13.36□□□□□ -0.27
CDK5RAP3-210ENST00000578733 ZNF408Q9H9D4 720 aa13.36□□□□□ -0.27
CDK5RAP3-210ENST00000578733 TOMM22Q9NS69 142 aa13.36□□□□□ -0.27
CDK5RAP3-210ENST00000578733 THSD7BQ9C0I4 1608 aa13.35□□□□□ -0.27
CDK5RAP3-210ENST00000578733 UNCXA6NJT0 531 aa13.35□□□□□ -0.27
CDK5RAP3-210ENST00000578733 CELF2O95319 508 aaKnown RBP13.35□□□□□ -0.27
CDK5RAP3-210ENST00000578733 CYP2D6P10635 497 aa13.35□□□□□ -0.27
CDK5RAP3-210ENST00000578733 ECE1P42892 770 aa13.35□□□□□ -0.27
CDK5RAP3-210ENST00000578733 HAND2P61296 217 aa13.35□□□□□ -0.27
CDK5RAP3-210ENST00000578733 CTDSPL2Q05D32 466 aa13.35□□□□□ -0.27
CDK5RAP3-210ENST00000578733 AKNAD1Q5T1N1 836 aa13.35□□□□□ -0.27
CDK5RAP3-210ENST00000578733 PRAMEF18Q5VWM3 479 aa13.35□□□□□ -0.27
CDK5RAP3-210ENST00000578733 CREB3L3Q68CJ9 461 aa13.35□□□□□ -0.27
CDK5RAP3-210ENST00000578733 MIGA2Q7L4E1 593 aa13.35□□□□□ -0.27
CDK5RAP3-210ENST00000578733 RALYLQ86SE5 291 aaKnown RBP13.35□□□□□ -0.27
CDK5RAP3-210ENST00000578733 METTL16Q86W50 562 aaKnown RBP13.35□□□□□ -0.27
CDK5RAP3-210ENST00000578733 ZNF444Q8N0Y2 327 aaPredicted RBP13.35□□□□□ -0.27
CDK5RAP3-210ENST00000578733 CCDC17Q96LX7 622 aa13.35□□□□□ -0.27
CDK5RAP3-210ENST00000578733 USP26Q9BXU7 913 aa13.35□□□□□ -0.27
CDK5RAP3-210ENST00000578733 KRT23Q9C075 422 aa13.35□□□□□ -0.27
CDK5RAP3-210ENST00000578733 CABP5Q9NP86 173 aa13.35□□□□□ -0.27
CDK5RAP3-210ENST00000578733 GINM1Q9NU53 330 aa13.35□□□□□ -0.27
CDK5RAP3-210ENST00000578733 GREB1LQ9C091 1923 aaPredicted RBP13.35□□□□□ -0.27
CDK5RAP3-210ENST00000578733 SSC5DA1L4H1 1573 aa13.34□□□□□ -0.27
CDK5RAP3-210ENST00000578733 CYP2D7A0A087X1C5 515 aa13.34□□□□□ -0.27
CDK5RAP3-210ENST00000578733 TRAF5O00463 557 aa13.34□□□□□ -0.27
CDK5RAP3-210ENST00000578733 SLC27A2O14975 620 aa13.34□□□□□ -0.27
CDK5RAP3-210ENST00000578733 CYP21A2P08686 494 aa13.34□□□□□ -0.27
CDK5RAP3-210ENST00000578733 HSPA4P34932 840 aa13.34□□□□□ -0.27
CDK5RAP3-210ENST00000578733 CDK8P49336 464 aa13.34□□□□□ -0.27
CDK5RAP3-210ENST00000578733 MAP3K10Q02779 954 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms