RNA–Protein interactions for RNA: ENST00000578692.1

CRLF3-203, Transcript of cytokine receptor like factor 3, humanhuman

TSL 2

Gene CRLF3, Length 1,392 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-203ENST00000578692 ADGRA2Q96PE1 1338 aa19.38■□□□□ 0.69
CRLF3-203ENST00000578692 TRIM75PA6NK02 468 aa19.38■□□□□ 0.69
CRLF3-203ENST00000578692 HMMRO75330 724 aa19.38■□□□□ 0.69
CRLF3-203ENST00000578692 IDH1O75874 414 aaKnown RBP19.38■□□□□ 0.69
CRLF3-203ENST00000578692 ECM2O94769 699 aaPredicted RBP19.38■□□□□ 0.69
CRLF3-203ENST00000578692 CYP2C8P10632 490 aa19.38■□□□□ 0.69
CRLF3-203ENST00000578692 CAP2P40123 477 aa19.38■□□□□ 0.69
CRLF3-203ENST00000578692 SLC9C1Q4G0N8 1177 aa19.38■□□□□ 0.69
CRLF3-203ENST00000578692 CCDC84Q86UT8 332 aaPredicted RBP19.38■□□□□ 0.69
CRLF3-203ENST00000578692 MAPKAPK5Q8IW41 473 aa19.38■□□□□ 0.69
CRLF3-203ENST00000578692 NDUFB9Q9Y6M9 179 aa19.38■□□□□ 0.69
CRLF3-203ENST00000578692 MAST2Q6P0Q8 1798 aa19.38■□□□□ 0.69
CRLF3-203ENST00000578692 POTEFA5A3E0 1075 aa19.37■□□□□ 0.69
CRLF3-203ENST00000578692 PSMC4P43686 418 aa19.37■□□□□ 0.69
CRLF3-203ENST00000578692 PRMT2P55345 433 aa19.37■□□□□ 0.69
CRLF3-203ENST00000578692 DYNLL1P63167 89 aaKnown RBP19.37■□□□□ 0.69
CRLF3-203ENST00000578692 FOXP4Q8IVH2 680 aaPredicted RBP19.37■□□□□ 0.69
CRLF3-203ENST00000578692 SIRT2Q8IXJ6 389 aa19.37■□□□□ 0.69
CRLF3-203ENST00000578692 ANTXR1Q9H6X2 564 aa19.37■□□□□ 0.69
CRLF3-203ENST00000578692 SLC45A1Q9Y2W3 748 aa19.37■□□□□ 0.69
CRLF3-203ENST00000578692 PHIPQ8WWQ0 1821 aa19.37■□□□□ 0.69
CRLF3-203ENST00000578692 FLT1P17948 1338 aa19.36■□□□□ 0.69
CRLF3-203ENST00000578692 HOXD10P28358 340 aa19.36■□□□□ 0.69
CRLF3-203ENST00000578692 CTGFP29279 349 aa19.36■□□□□ 0.69
CRLF3-203ENST00000578692 RRP1BQ14684 758 aaKnown RBP19.36■□□□□ 0.69
CRLF3-203ENST00000578692 CLASRPQ8N2M8 674 aaKnown RBP19.36■□□□□ 0.69
CRLF3-203ENST00000578692 KIF1BPQ96EK5 621 aa19.36■□□□□ 0.69
CRLF3-203ENST00000578692 TBC1D2Q9BYX2 928 aa19.36■□□□□ 0.69
CRLF3-203ENST00000578692 TNRC18O15417 2968 aaPredicted RBP19.36■□□□□ 0.69
CRLF3-203ENST00000578692 ZSWIM8A7E2V4 1837 aa19.36■□□□□ 0.69
CRLF3-203ENST00000578692 APBB1O00213 710 aa19.35■□□□□ 0.69
CRLF3-203ENST00000578692 FMNL1O95466 1100 aaPredicted RBP19.35■□□□□ 0.69
CRLF3-203ENST00000578692 BCRP11274 1271 aa19.35■□□□□ 0.69
CRLF3-203ENST00000578692 MAP3K12Q12852 859 aa19.35■□□□□ 0.69
CRLF3-203ENST00000578692 SPP2Q13103 211 aa19.35■□□□□ 0.69
CRLF3-203ENST00000578692 MAGEB6Q8N7X4 407 aa19.35■□□□□ 0.69
CRLF3-203ENST00000578692 ZNF280CQ8ND82 737 aa19.35■□□□□ 0.69
CRLF3-203ENST00000578692 ZNF333Q96JL9 665 aa19.35■□□□□ 0.69
CRLF3-203ENST00000578692 TRIM47Q96LD4 638 aa19.35■□□□□ 0.69
CRLF3-203ENST00000578692 TMEM106CQ9BVX2 250 aa19.35■□□□□ 0.69
CRLF3-203ENST00000578692 PALD1Q9ULE6 856 aa19.35■□□□□ 0.69
CRLF3-203ENST00000578692 USP17L5A8MUK1 530 aa19.34■□□□□ 0.69
CRLF3-203ENST00000578692 CERS3Q8IU89 383 aa19.34■□□□□ 0.69
CRLF3-203ENST00000578692 MIGA1Q8NAN2 632 aa19.34■□□□□ 0.69
CRLF3-203ENST00000578692 SRRDQ9UH36 339 aa19.34■□□□□ 0.69
CRLF3-203ENST00000578692 AGTPBP1Q9UPW5 1226 aa19.34■□□□□ 0.69
CRLF3-203ENST00000578692 PTPRFP10586 1907 aa19.34■□□□□ 0.69
CRLF3-203ENST00000578692 CDK5RAP2Q96SN8 1893 aa19.34■□□□□ 0.69
CRLF3-203ENST00000578692 RAB11FIP3O75154 756 aa19.33■□□□□ 0.69
CRLF3-203ENST00000578692 IFIT2P09913 472 aaKnown RBP19.33■□□□□ 0.69
CRLF3-203ENST00000578692 OSBPP22059 807 aa19.33■□□□□ 0.69
CRLF3-203ENST00000578692 TMED8Q6PL24 325 aaPredicted RBP19.33■□□□□ 0.69
CRLF3-203ENST00000578692 METTL16Q86W50 562 aaKnown RBP19.33■□□□□ 0.69
CRLF3-203ENST00000578692 CRACR2BQ8N4Y2 399 aaPredicted RBP19.33■□□□□ 0.69
CRLF3-203ENST00000578692 PROCA1Q8NCQ7 364 aaPredicted RBP19.33■□□□□ 0.69
CRLF3-203ENST00000578692 TRIM34Q9BYJ4 488 aa19.33■□□□□ 0.69
CRLF3-203ENST00000578692 AS3MTQ9HBK9 375 aa19.33■□□□□ 0.69
CRLF3-203ENST00000578692 HTTP42858 3142 aa19.33■□□□□ 0.69
CRLF3-203ENST00000578692 FOCADQ5VW36 1801 aa19.32■□□□□ 0.68
CRLF3-203ENST00000578692 HLA-DOAP06340 250 aa19.32■□□□□ 0.68
CRLF3-203ENST00000578692 PDE3AQ14432 1141 aa19.32■□□□□ 0.68
CRLF3-203ENST00000578692 TTF1Q15361 905 aaPredicted RBP19.32■□□□□ 0.68
CRLF3-203ENST00000578692 SMCR8Q8TEV9 937 aaPredicted RBP19.32■□□□□ 0.68
CRLF3-203ENST00000578692 SH3TC2Q8TF17 1288 aa19.32■□□□□ 0.68
CRLF3-203ENST00000578692 BCL11AQ9H165 835 aa19.32■□□□□ 0.68
CRLF3-203ENST00000578692 SAP30BPQ9UHR5 308 aaKnown RBP19.32■□□□□ 0.68
CRLF3-203ENST00000578692 ATAD5Q96QE3 1844 aa19.32■□□□□ 0.68
CRLF3-203ENST00000578692 ASNSP08243 561 aa19.32■□□□□ 0.68
CRLF3-203ENST00000578692 EN2P19622 333 aaPredicted RBP19.32■□□□□ 0.68
CRLF3-203ENST00000578692 USP5P45974 858 aa19.32■□□□□ 0.68
CRLF3-203ENST00000578692 FCGRTP55899 365 aa19.32■□□□□ 0.68
CRLF3-203ENST00000578692 SLC4A8Q2Y0W8 1093 aa19.32■□□□□ 0.68
CRLF3-203ENST00000578692 TREML2Q5T2D2 321 aa19.32■□□□□ 0.68
CRLF3-203ENST00000578692 C20orf194Q5TEA3 1177 aa19.32■□□□□ 0.68
CRLF3-203ENST00000578692 DNAJC18Q9H819 358 aa19.32■□□□□ 0.68
CRLF3-203ENST00000578692 SIPA1L1O43166 1804 aa19.31■□□□□ 0.68
CRLF3-203ENST00000578692 HMGCS2P54868 508 aa19.31■□□□□ 0.68
CRLF3-203ENST00000578692 SH3D19Q5HYK7 790 aa19.31■□□□□ 0.68
CRLF3-203ENST00000578692 RAET1EQ8TD07 263 aa19.31■□□□□ 0.68
CRLF3-203ENST00000578692 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.31■□□□□ 0.68
CRLF3-203ENST00000578692 PNMA3Q9UL41 463 aa19.31■□□□□ 0.68
CRLF3-203ENST00000578692 RBBP6Q7Z6E9 1792 aaKnown RBP19.3■□□□□ 0.68
CRLF3-203ENST00000578692 CENPFP49454 3210 aa19.3■□□□□ 0.68
CRLF3-203ENST00000578692 MYPNQ86TC9 1320 aa19.3■□□□□ 0.68
CRLF3-203ENST00000578692 MYCP01106 439 aaPredicted RBP19.3■□□□□ 0.68
CRLF3-203ENST00000578692 JAG1P78504 1218 aa19.3■□□□□ 0.68
CRLF3-203ENST00000578692 PABPC4Q13310 644 aaKnown RBP eCLIP19.3■□□□□ 0.68
CRLF3-203ENST00000578692 WDR18Q9BV38 432 aa19.3■□□□□ 0.68
CRLF3-203ENST00000578692 GINM1Q9NU53 330 aa19.3■□□□□ 0.68
CRLF3-203ENST00000578692 SLC9C2Q5TAH2 1124 aa19.29■□□□□ 0.68
CRLF3-203ENST00000578692 DNAJC2Q99543 621 aaKnown RBP19.29■□□□□ 0.68
CRLF3-203ENST00000578692 MYH1P12882 1939 aa19.28■□□□□ 0.68
CRLF3-203ENST00000578692 MAGEB6P1A0A0J9YX57 407 aa19.28■□□□□ 0.68
CRLF3-203ENST00000578692 GOLIM4O00461 696 aa19.28■□□□□ 0.68
CRLF3-203ENST00000578692 GDF11O95390 407 aa19.28■□□□□ 0.68
CRLF3-203ENST00000578692 GRK4P32298 578 aa19.28■□□□□ 0.68
CRLF3-203ENST00000578692 BACE1P56817 501 aa19.28■□□□□ 0.68
CRLF3-203ENST00000578692 PRKCZQ05513 592 aa19.28■□□□□ 0.68
CRLF3-203ENST00000578692 PRPF38BQ5VTL8 546 aaKnown RBP19.28■□□□□ 0.68
CRLF3-203ENST00000578692 ANKRD13CQ8N6S4 541 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms