RNA–Protein interactions for RNA: ENST00000578314.1

VAPA-205, Transcript of VAMP associated protein A, humanhuman

TSL 3

Gene VAPA, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-205ENST00000578314 METTL16Q86W50 562 aaKnown RBP27.92■■■□□ 2.06
VAPA-205ENST00000578314 MIGA1Q8NAN2 632 aa27.92■■■□□ 2.06
VAPA-205ENST00000578314 OTOP1Q7RTM1 612 aa27.91■■■□□ 2.06
VAPA-205ENST00000578314 FOXP4Q8IVH2 680 aaPredicted RBP27.91■■■□□ 2.06
VAPA-205ENST00000578314 CD99L2Q8TCZ2 262 aa27.91■■■□□ 2.06
VAPA-205ENST00000578314 BCL11AQ9H165 835 aa27.91■■■□□ 2.06
VAPA-205ENST00000578314 TRIM17Q9Y577 477 aa27.91■■■□□ 2.06
VAPA-205ENST00000578314 A0A0G2JLL6 359 aaPredicted RBP27.9■■■□□ 2.06
VAPA-205ENST00000578314 PDHXO00330 501 aa27.9■■■□□ 2.06
VAPA-205ENST00000578314 GOLIM4O00461 696 aa27.9■■■□□ 2.06
VAPA-205ENST00000578314 PRRT2Q7Z6L0 340 aaPredicted RBP27.9■■■□□ 2.06
VAPA-205ENST00000578314 YTHDC1Q96MU7 727 aaKnown RBP27.9■■■□□ 2.06
VAPA-205ENST00000578314 DNAJC2Q99543 621 aaKnown RBP27.9■■■□□ 2.06
VAPA-205ENST00000578314 CAP2P40123 477 aa27.89■■■□□ 2.06
VAPA-205ENST00000578314 RRP1BQ14684 758 aaKnown RBP27.89■■■□□ 2.06
VAPA-205ENST00000578314 SLC9C2Q5TAH2 1124 aa27.89■■■□□ 2.06
VAPA-205ENST00000578314 GPAT2Q6NUI2 795 aa27.89■■■□□ 2.06
VAPA-205ENST00000578314 FASTKD5Q7L8L6 764 aaKnown RBP27.89■■■□□ 2.06
VAPA-205ENST00000578314 RIOK1Q9BRS2 568 aaKnown RBP27.89■■■□□ 2.06
VAPA-205ENST00000578314 PALD1Q9ULE6 856 aa27.89■■■□□ 2.06
VAPA-205ENST00000578314 SMARCA5O60264 1052 aaPredicted RBP27.88■■■□□ 2.05
VAPA-205ENST00000578314 PDE6AP16499 860 aa27.88■■■□□ 2.05
VAPA-205ENST00000578314 CAP1Q01518 475 aa27.88■■■□□ 2.05
VAPA-205ENST00000578314 BOLA2Q9H3K6 86 aa27.88■■■□□ 2.05
VAPA-205ENST00000578314 EFCC1Q9HA90 598 aa27.88■■■□□ 2.05
VAPA-205ENST00000578314 PCDHB15Q9Y5E8 787 aa27.88■■■□□ 2.05
VAPA-205ENST00000578314 HTTP42858 3142 aa27.88■■■□□ 2.05
VAPA-205ENST00000578314 MYO5AQ9Y4I1 1855 aaKnown RBP27.87■■■□□ 2.05
VAPA-205ENST00000578314 C17orf99Q6UX52 265 aa27.87■■■□□ 2.05
VAPA-205ENST00000578314 HAUS7Q99871 368 aa27.87■■■□□ 2.05
VAPA-205ENST00000578314 PAG1Q9NWQ8 432 aa27.87■■■□□ 2.05
VAPA-205ENST00000578314 FRMD4AQ9P2Q2 1039 aaPredicted RBP27.87■■■□□ 2.05
VAPA-205ENST00000578314 USP5P45974 858 aa27.86■■■□□ 2.05
VAPA-205ENST00000578314 EDC3Q96F86 508 aaKnown RBP27.86■■■□□ 2.05
VAPA-205ENST00000578314 TBC1D2Q9BYX2 928 aa27.86■■■□□ 2.05
VAPA-205ENST00000578314 DNAJC18Q9H819 358 aa27.86■■■□□ 2.05
VAPA-205ENST00000578314 SAP30BPQ9UHR5 308 aaKnown RBP27.86■■■□□ 2.05
VAPA-205ENST00000578314 MAGEB6P1A0A0J9YX57 407 aa27.85■■■□□ 2.05
VAPA-205ENST00000578314 TCRBV5S4A2TA0A5A2 114 aa27.85■■■□□ 2.05
VAPA-205ENST00000578314 HLA-DOAP06340 250 aa27.85■■■□□ 2.05
VAPA-205ENST00000578314 ARHGEF6Q15052 776 aa27.85■■■□□ 2.05
VAPA-205ENST00000578314 CCDC84Q86UT8 332 aaPredicted RBP27.85■■■□□ 2.05
VAPA-205ENST00000578314 PTPN22Q9Y2R2 807 aa27.85■■■□□ 2.05
VAPA-205ENST00000578314 SLC45A1Q9Y2W3 748 aa27.85■■■□□ 2.05
VAPA-205ENST00000578314 ZNF532Q9HCE3 1301 aa27.85■■■□□ 2.05
VAPA-205ENST00000578314 TRIM75PA6NK02 468 aa27.84■■■□□ 2.05
VAPA-205ENST00000578314 ADGRA2Q96PE1 1338 aa27.84■■■□□ 2.05
VAPA-205ENST00000578314 CRACR2BQ8N4Y2 399 aaPredicted RBP27.83■■■□□ 2.05
VAPA-205ENST00000578314 ZNF280CQ8ND82 737 aa27.83■■■□□ 2.05
VAPA-205ENST00000578314 GINM1Q9NU53 330 aa27.83■■■□□ 2.05
VAPA-205ENST00000578314 USP17L5A8MUK1 530 aa27.82■■■□□ 2.04
VAPA-205ENST00000578314 LACTBP83111 547 aaPredicted RBP27.82■■■□□ 2.04
VAPA-205ENST00000578314 GADL1Q6ZQY3 521 aa27.82■■■□□ 2.04
VAPA-205ENST00000578314 PARK7Q99497 189 aaKnown RBP27.82■■■□□ 2.04
VAPA-205ENST00000578314 TRIM34Q9BYJ4 488 aa27.82■■■□□ 2.04
VAPA-205ENST00000578314 ECHDC1Q9NTX5 307 aa27.82■■■□□ 2.04
VAPA-205ENST00000578314 SPP2Q13103 211 aa27.81■■■□□ 2.04
VAPA-205ENST00000578314 EHD4Q9H223 541 aa27.81■■■□□ 2.04
VAPA-205ENST00000578314 CPA4Q9UI42 421 aa27.81■■■□□ 2.04
VAPA-205ENST00000578314 DOCK1Q14185 1865 aa27.81■■■□□ 2.04
VAPA-205ENST00000578314 ASNSP08243 561 aa27.8■■■□□ 2.04
VAPA-205ENST00000578314 ADD2P35612 726 aa27.8■■■□□ 2.04
VAPA-205ENST00000578314 JAG1P78504 1218 aa27.8■■■□□ 2.04
VAPA-205ENST00000578314 KIF22Q14807 665 aa27.8■■■□□ 2.04
VAPA-205ENST00000578314 TTC6Q86TZ1 520 aa27.8■■■□□ 2.04
VAPA-205ENST00000578314 WDR18Q9BV38 432 aa27.8■■■□□ 2.04
VAPA-205ENST00000578314 CRNKL1Q9BZJ0 848 aaKnown RBP27.8■■■□□ 2.04
VAPA-205ENST00000578314 DDX24Q9GZR7 859 aaKnown RBP eCLIP27.8■■■□□ 2.04
VAPA-205ENST00000578314 AS3MTQ9HBK9 375 aa27.8■■■□□ 2.04
VAPA-205ENST00000578314 CYP2C8P10632 490 aa27.79■■■□□ 2.04
VAPA-205ENST00000578314 PROCA1Q8NCQ7 364 aaPredicted RBP27.79■■■□□ 2.04
VAPA-205ENST00000578314 CRBNQ96SW2 442 aa27.79■■■□□ 2.04
VAPA-205ENST00000578314 SERPINB13Q9UIV8 391 aa27.79■■■□□ 2.04
VAPA-205ENST00000578314 AGTPBP1Q9UPW5 1226 aa27.79■■■□□ 2.04
VAPA-205ENST00000578314 FOCADQ5VW36 1801 aa27.78■■■□□ 2.04
VAPA-205ENST00000578314 GNRH1P01148 92 aa27.78■■■□□ 2.04
VAPA-205ENST00000578314 SLC4A8Q2Y0W8 1093 aa27.78■■■□□ 2.04
VAPA-205ENST00000578314 SH3D19Q5HYK7 790 aa27.78■■■□□ 2.04
VAPA-205ENST00000578314 TATDN1Q6P1N9 297 aa27.78■■■□□ 2.04
VAPA-205ENST00000578314 ARHGAP39Q9C0H5 1083 aa27.78■■■□□ 2.04
VAPA-205ENST00000578314 SIPA1L1O43166 1804 aa27.78■■■□□ 2.04
VAPA-205ENST00000578314 CDK5RAP2Q96SN8 1893 aa27.77■■■□□ 2.04
VAPA-205ENST00000578314 BCRP11274 1271 aa27.77■■■□□ 2.04
VAPA-205ENST00000578314 UBE3CQ15386 1083 aa27.77■■■□□ 2.04
VAPA-205ENST00000578314 LCORLQ8N3X6 602 aa27.77■■■□□ 2.04
VAPA-205ENST00000578314 PHIPQ8WWQ0 1821 aa27.76■■■□□ 2.04
VAPA-205ENST00000578314 TREML2Q5T2D2 321 aa27.76■■■□□ 2.03
VAPA-205ENST00000578314 CENPFP49454 3210 aa27.75■■■□□ 2.03
VAPA-205ENST00000578314 GDF11O95390 407 aa27.75■■■□□ 2.03
VAPA-205ENST00000578314 PLCD1P51178 756 aa27.75■■■□□ 2.03
VAPA-205ENST00000578314 HMGCS2P54868 508 aa27.75■■■□□ 2.03
VAPA-205ENST00000578314 SLFNL1Q499Z3 407 aa27.75■■■□□ 2.03
VAPA-205ENST00000578314 ZSCAN25Q6NSZ9 544 aa27.75■■■□□ 2.03
VAPA-205ENST00000578314 GPATCH3Q96I76 525 aa27.75■■■□□ 2.03
VAPA-205ENST00000578314 ZBTB21Q9ULJ3 1066 aa27.75■■■□□ 2.03
VAPA-205ENST00000578314 CTGFP29279 349 aa27.74■■■□□ 2.03
VAPA-205ENST00000578314 BACE1P56817 501 aa27.74■■■□□ 2.03
VAPA-205ENST00000578314 SHROOM1Q2M3G4 852 aaPredicted RBP27.74■■■□□ 2.03
VAPA-205ENST00000578314 ARMC5Q96C12 935 aa27.74■■■□□ 2.03
VAPA-205ENST00000578314 ARMT1Q9H993 441 aa27.74■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms