RNA–Protein interactions for RNA: ENST00000578297.1

LIMD2-204, Transcript of LIM domain containing 2, humanhuman

TSL 2

Gene LIMD2, Length 760 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-204ENST00000578297 FOXP4Q8IVH2 680 aaPredicted RBP27.89■■■□□ 2.06
LIMD2-204ENST00000578297 LCORLQ8N3X6 602 aa27.89■■■□□ 2.06
LIMD2-204ENST00000578297 PRDM10Q9NQV6 1147 aa27.89■■■□□ 2.06
LIMD2-204ENST00000578297 SAP30BPQ9UHR5 308 aaKnown RBP27.89■■■□□ 2.06
LIMD2-204ENST00000578297 TESPA1A2RU30 521 aaPredicted RBP27.88■■■□□ 2.05
LIMD2-204ENST00000578297 ZFYP08048 801 aaPredicted RBP27.88■■■□□ 2.05
LIMD2-204ENST00000578297 PPIL2Q13356 520 aa27.88■■■□□ 2.05
LIMD2-204ENST00000578297 SCYL3Q8IZE3 742 aa27.88■■■□□ 2.05
LIMD2-204ENST00000578297 MS4A4AQ96JQ5 239 aa27.88■■■□□ 2.05
LIMD2-204ENST00000578297 ARMT1Q9H993 441 aa27.88■■■□□ 2.05
LIMD2-204ENST00000578297 TSKSQ9UJT2 592 aa27.88■■■□□ 2.05
LIMD2-204ENST00000578297 MYH1P12882 1939 aa27.88■■■□□ 2.05
LIMD2-204ENST00000578297 SIPA1L1O43166 1804 aa27.88■■■□□ 2.05
LIMD2-204ENST00000578297 FAM196BA6NMK8 535 aa27.87■■■□□ 2.05
LIMD2-204ENST00000578297 MBD4O95243 580 aa27.87■■■□□ 2.05
LIMD2-204ENST00000578297 HLA-DOAP06340 250 aa27.87■■■□□ 2.05
LIMD2-204ENST00000578297 GTF2A2P52657 109 aa27.87■■■□□ 2.05
LIMD2-204ENST00000578297 LRRFIP1Q32MZ4 808 aaKnown RBP27.87■■■□□ 2.05
LIMD2-204ENST00000578297 IRF6O14896 467 aa27.86■■■□□ 2.05
LIMD2-204ENST00000578297 RNF113AO15541 343 aaKnown RBP27.86■■■□□ 2.05
LIMD2-204ENST00000578297 IFNL1Q8IU54 200 aa27.86■■■□□ 2.05
LIMD2-204ENST00000578297 PUS7LQ9H0K6 701 aaKnown RBP27.86■■■□□ 2.05
LIMD2-204ENST00000578297 PICK1Q9NRD5 415 aa27.85■■■□□ 2.05
LIMD2-204ENST00000578297 ALDH1A1P00352 501 aa27.84■■■□□ 2.05
LIMD2-204ENST00000578297 PTPRAP18433 802 aa27.84■■■□□ 2.05
LIMD2-204ENST00000578297 TTC6Q86TZ1 520 aa27.84■■■□□ 2.05
LIMD2-204ENST00000578297 SDR42E1Q8WUS8 393 aa27.84■■■□□ 2.05
LIMD2-204ENST00000578297 APPBP2Q92624 585 aa27.84■■■□□ 2.05
LIMD2-204ENST00000578297 DCP1AQ9NPI6 582 aaPredicted RBP27.84■■■□□ 2.05
LIMD2-204ENST00000578297 IGF2BP3O00425 579 aaKnown RBP eCLIP27.83■■■□□ 2.05
LIMD2-204ENST00000578297 SNAPC2Q13487 334 aa27.83■■■□□ 2.05
LIMD2-204ENST00000578297 PLEKHM2Q8IWE5 1019 aa27.83■■■□□ 2.05
LIMD2-204ENST00000578297 CRACR2BQ8N4Y2 399 aaPredicted RBP27.83■■■□□ 2.05
LIMD2-204ENST00000578297 PTPN18Q99952 460 aa27.83■■■□□ 2.05
LIMD2-204ENST00000578297 FSD1Q9BTV5 496 aa27.83■■■□□ 2.05
LIMD2-204ENST00000578297 TRIM34Q9BYJ4 488 aa27.83■■■□□ 2.05
LIMD2-204ENST00000578297 EHD4Q9H223 541 aa27.83■■■□□ 2.05
LIMD2-204ENST00000578297 OSBPL3Q9H4L5 887 aa27.83■■■□□ 2.05
LIMD2-204ENST00000578297 DNAJC18Q9H819 358 aa27.83■■■□□ 2.05
LIMD2-204ENST00000578297 ATP8A2Q9NTI2 1148 aa27.83■■■□□ 2.05
LIMD2-204ENST00000578297 DDX60LQ5H9U9 1706 aaKnown RBP27.83■■■□□ 2.05
LIMD2-204ENST00000578297 DOCK1Q14185 1865 aa27.83■■■□□ 2.04
LIMD2-204ENST00000578297 CAP2P40123 477 aa27.82■■■□□ 2.04
LIMD2-204ENST00000578297 SLC4A8Q2Y0W8 1093 aa27.82■■■□□ 2.04
LIMD2-204ENST00000578297 COL13A1Q5TAT6 717 aaPredicted RBP27.82■■■□□ 2.04
LIMD2-204ENST00000578297 OTUD7BQ6GQQ9 843 aa27.82■■■□□ 2.04
LIMD2-204ENST00000578297 BRI3BPQ8WY22 251 aa27.82■■■□□ 2.04
LIMD2-204ENST00000578297 OSBP2Q969R2 916 aa27.82■■■□□ 2.04
LIMD2-204ENST00000578297 EVI5LQ96CN4 794 aa27.82■■■□□ 2.04
LIMD2-204ENST00000578297 CFHR5Q9BXR6 569 aa27.82■■■□□ 2.04
LIMD2-204ENST00000578297 MCM9Q9NXL9 1143 aa27.82■■■□□ 2.04
LIMD2-204ENST00000578297 KCNH4Q9UQ05 1017 aa27.82■■■□□ 2.04
LIMD2-204ENST00000578297 NAV1Q8NEY1 1877 aa27.82■■■□□ 2.04
LIMD2-204ENST00000578297 CCL15-CCL14A0A0B4J2E2 113 aa27.81■■■□□ 2.04
LIMD2-204ENST00000578297 PRKAB2O43741 272 aa27.81■■■□□ 2.04
LIMD2-204ENST00000578297 CETPP11597 493 aa27.81■■■□□ 2.04
LIMD2-204ENST00000578297 CCL15Q16663 113 aa27.81■■■□□ 2.04
LIMD2-204ENST00000578297 SERPINB13Q9UIV8 391 aa27.81■■■□□ 2.04
LIMD2-204ENST00000578297 POLR3DP05423 398 aaPredicted RBP27.8■■■□□ 2.04
LIMD2-204ENST00000578297 RRP1BQ14684 758 aaKnown RBP27.8■■■□□ 2.04
LIMD2-204ENST00000578297 STRBPQ96SI9 672 aaKnown RBP27.8■■■□□ 2.04
LIMD2-204ENST00000578297 SLC4A4Q9Y6R1 1079 aa27.8■■■□□ 2.04
LIMD2-204ENST00000578297 ZHX2Q9Y6X8 837 aa27.8■■■□□ 2.04
LIMD2-204ENST00000578297 CXCL11O14625 94 aa27.79■■■□□ 2.04
LIMD2-204ENST00000578297 TBC1D8O95759 1140 aa27.79■■■□□ 2.04
LIMD2-204ENST00000578297 PLCD1P51178 756 aa27.79■■■□□ 2.04
LIMD2-204ENST00000578297 AFG3L2Q9Y4W6 797 aa27.79■■■□□ 2.04
LIMD2-204ENST00000578297 TICAM2Q86XR7 235 aa27.78■■■□□ 2.04
LIMD2-204ENST00000578297 TATDN1Q6P1N9 297 aa27.77■■■□□ 2.04
LIMD2-204ENST00000578297 GINM1Q9NU53 330 aa27.77■■■□□ 2.04
LIMD2-204ENST00000578297 PHIPQ8WWQ0 1821 aa27.76■■■□□ 2.04
LIMD2-204ENST00000578297 ATAD5Q96QE3 1844 aa27.76■■■□□ 2.04
LIMD2-204ENST00000578297 ZMYM1Q5SVZ6 1142 aa27.76■■■□□ 2.03
LIMD2-204ENST00000578297 DDRGK1Q96HY6 314 aa27.76■■■□□ 2.03
LIMD2-204ENST00000578297 TBC1D2Q9BYX2 928 aa27.76■■■□□ 2.03
LIMD2-204ENST00000578297 FRMD4AQ9P2Q2 1039 aaPredicted RBP27.76■■■□□ 2.03
LIMD2-204ENST00000578297 M0R2C6 588 aa27.75■■■□□ 2.03
LIMD2-204ENST00000578297 GPAA1O43292 621 aa27.75■■■□□ 2.03
LIMD2-204ENST00000578297 ASNSP08243 561 aa27.75■■■□□ 2.03
LIMD2-204ENST00000578297 GABPAQ06546 454 aa27.75■■■□□ 2.03
LIMD2-204ENST00000578297 NOM1Q5C9Z4 860 aaKnown RBP27.75■■■□□ 2.03
LIMD2-204ENST00000578297 ZCCHC17Q9NP64 241 aaKnown RBP27.75■■■□□ 2.03
LIMD2-204ENST00000578297 TAOK2Q9UL54 1235 aa27.75■■■□□ 2.03
LIMD2-204ENST00000578297 BTBD19C9JJ37 291 aa27.74■■■□□ 2.03
LIMD2-204ENST00000578297 GNAT2P19087 354 aa27.74■■■□□ 2.03
LIMD2-204ENST00000578297 GIMAP6Q6P9H5 292 aa27.74■■■□□ 2.03
LIMD2-204ENST00000578297 FAM43AQ8N2R8 423 aa27.74■■■□□ 2.03
LIMD2-204ENST00000578297 R3HDMLQ9H3Y0 253 aa27.74■■■□□ 2.03
LIMD2-204ENST00000578297 BAZ2AQ9UIF9 1905 aaKnown RBP27.74■■■□□ 2.03
LIMD2-204ENST00000578297 CASP8AP2Q9UKL3 1982 aa27.73■■■□□ 2.03
LIMD2-204ENST00000578297 A0A0G2JLL6 359 aaPredicted RBP27.73■■■□□ 2.03
LIMD2-204ENST00000578297 USP17L5A8MUK1 530 aa27.73■■■□□ 2.03
LIMD2-204ENST00000578297 GSG1L2A8MUP6 293 aa27.73■■■□□ 2.03
LIMD2-204ENST00000578297 JAG1P78504 1218 aa27.73■■■□□ 2.03
LIMD2-204ENST00000578297 MOGSQ13724 837 aa27.73■■■□□ 2.03
LIMD2-204ENST00000578297 PRRT2Q7Z6L0 340 aaPredicted RBP27.73■■■□□ 2.03
LIMD2-204ENST00000578297 CCDC84Q86UT8 332 aaPredicted RBP27.73■■■□□ 2.03
LIMD2-204ENST00000578297 AMOTL1Q8IY63 956 aa27.73■■■□□ 2.03
LIMD2-204ENST00000578297 SEC62Q99442 399 aaKnown RBP27.73■■■□□ 2.03
LIMD2-204ENST00000578297 TRIM6-TRIM34B2RNG4 842 aa27.72■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms