RNA–Protein interactions for RNA: ENST00000578150.1

TTC39C-205, Transcript of tetratricopeptide repeat domain 39C, humanhuman

TSL 3

Gene TTC39C, Length 499 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-205ENST00000578150 TRIM75PA6NK02 468 aa23.69■■□□□ 1.38
TTC39C-205ENST00000578150 BCRP11274 1271 aa23.69■■□□□ 1.38
TTC39C-205ENST00000578150 TMED8Q6PL24 325 aaPredicted RBP23.69■■□□□ 1.38
TTC39C-205ENST00000578150 GADL1Q6ZQY3 521 aa23.69■■□□□ 1.38
TTC39C-205ENST00000578150 PTPRFP10586 1907 aa23.69■■□□□ 1.38
TTC39C-205ENST00000578150 FAM196BA6NMK8 535 aa23.68■■□□□ 1.38
TTC39C-205ENST00000578150 CYP2C8P10632 490 aa23.68■■□□□ 1.38
TTC39C-205ENST00000578150 CAP2P40123 477 aa23.68■■□□□ 1.38
TTC39C-205ENST00000578150 CERS3Q8IU89 383 aa23.68■■□□□ 1.38
TTC39C-205ENST00000578150 TRIM47Q96LD4 638 aa23.68■■□□□ 1.38
TTC39C-205ENST00000578150 PIH1D3Q9NQM4 214 aaKnown RBP23.68■■□□□ 1.38
TTC39C-205ENST00000578150 SRRDQ9UH36 339 aa23.68■■□□□ 1.38
TTC39C-205ENST00000578150 EXOC6BQ9Y2D4 811 aa23.68■■□□□ 1.38
TTC39C-205ENST00000578150 ZSWIM8A7E2V4 1837 aa23.68■■□□□ 1.38
TTC39C-205ENST00000578150 FMNL1O95466 1100 aaPredicted RBP23.67■■□□□ 1.38
TTC39C-205ENST00000578150 ADGRA1Q86SQ6 560 aa23.67■■□□□ 1.38
TTC39C-205ENST00000578150 TGFBRAP1Q8WUH2 860 aa23.67■■□□□ 1.38
TTC39C-205ENST00000578150 DDX19BQ9UMR2 479 aa23.67■■□□□ 1.38
TTC39C-205ENST00000578150 AGTPBP1Q9UPW5 1226 aa23.67■■□□□ 1.38
TTC39C-205ENST00000578150 FLT1P17948 1338 aa23.66■■□□□ 1.38
TTC39C-205ENST00000578150 CTGFP29279 349 aa23.66■■□□□ 1.38
TTC39C-205ENST00000578150 AACSQ86V21 672 aa23.66■■□□□ 1.38
TTC39C-205ENST00000578150 RPAP2Q8IXW5 612 aaPredicted RBP23.66■■□□□ 1.38
TTC39C-205ENST00000578150 PROCA1Q8NCQ7 364 aaPredicted RBP23.66■■□□□ 1.38
TTC39C-205ENST00000578150 CHMP4BQ9H444 224 aaKnown RBP23.66■■□□□ 1.38
TTC39C-205ENST00000578150 HMMRO75330 724 aa23.65■■□□□ 1.38
TTC39C-205ENST00000578150 OSBPP22059 807 aa23.65■■□□□ 1.38
TTC39C-205ENST00000578150 FCGRTP55899 365 aa23.65■■□□□ 1.38
TTC39C-205ENST00000578150 METTL16Q86W50 562 aaKnown RBP23.65■■□□□ 1.38
TTC39C-205ENST00000578150 FOXP4Q8IVH2 680 aaPredicted RBP23.65■■□□□ 1.38
TTC39C-205ENST00000578150 ZNF280CQ8ND82 737 aa23.65■■□□□ 1.38
TTC39C-205ENST00000578150 FRMD4AQ9P2Q2 1039 aaPredicted RBP23.65■■□□□ 1.38
TTC39C-205ENST00000578150 PNMA3Q9UL41 463 aa23.65■■□□□ 1.38
TTC39C-205ENST00000578150 FOCADQ5VW36 1801 aa23.65■■□□□ 1.38
TTC39C-205ENST00000578150 MYO5AQ9Y4I1 1855 aaKnown RBP23.64■■□□□ 1.38
TTC39C-205ENST00000578150 USP17L5A8MUK1 530 aa23.64■■□□□ 1.37
TTC39C-205ENST00000578150 IDH1O75874 414 aaKnown RBP23.64■■□□□ 1.37
TTC39C-205ENST00000578150 EN2P19622 333 aaPredicted RBP23.64■■□□□ 1.37
TTC39C-205ENST00000578150 CYP7A1P22680 504 aa23.64■■□□□ 1.37
TTC39C-205ENST00000578150 SPP2Q13103 211 aa23.64■■□□□ 1.37
TTC39C-205ENST00000578150 SLC4A8Q2Y0W8 1093 aa23.64■■□□□ 1.37
TTC39C-205ENST00000578150 CCDC84Q86UT8 332 aaPredicted RBP23.64■■□□□ 1.37
TTC39C-205ENST00000578150 MAPKAPK5Q8IW41 473 aa23.64■■□□□ 1.37
TTC39C-205ENST00000578150 RHPN1Q8TCX5 695 aa23.64■■□□□ 1.37
TTC39C-205ENST00000578150 SMCR8Q8TEV9 937 aaPredicted RBP23.64■■□□□ 1.37
TTC39C-205ENST00000578150 SH3TC2Q8TF17 1288 aa23.64■■□□□ 1.37
TTC39C-205ENST00000578150 AS3MTQ9HBK9 375 aa23.64■■□□□ 1.37
TTC39C-205ENST00000578150 ZBTB40Q9NUA8 1239 aa23.64■■□□□ 1.37
TTC39C-205ENST00000578150 ATAD5Q96QE3 1844 aa23.63■■□□□ 1.37
TTC39C-205ENST00000578150 MYPNQ86TC9 1320 aa23.63■■□□□ 1.37
TTC39C-205ENST00000578150 MAP3K12Q12852 859 aa23.63■■□□□ 1.37
TTC39C-205ENST00000578150 RAET1EQ8TD07 263 aa23.63■■□□□ 1.37
TTC39C-205ENST00000578150 CDK5RAP2Q96SN8 1893 aa23.63■■□□□ 1.37
TTC39C-205ENST00000578150 GINM1Q9NU53 330 aa23.63■■□□□ 1.37
TTC39C-205ENST00000578150 BRCA2P51587 3418 aa23.62■■□□□ 1.37
TTC39C-205ENST00000578150 ECM2O94769 699 aaPredicted RBP23.62■■□□□ 1.37
TTC39C-205ENST00000578150 ASNSP08243 561 aa23.62■■□□□ 1.37
TTC39C-205ENST00000578150 PABPC4Q13310 644 aaKnown RBP eCLIP23.62■■□□□ 1.37
TTC39C-205ENST00000578150 RRP1BQ14684 758 aaKnown RBP23.62■■□□□ 1.37
TTC39C-205ENST00000578150 CLASRPQ8N2M8 674 aaKnown RBP23.62■■□□□ 1.37
TTC39C-205ENST00000578150 CRACR2BQ8N4Y2 399 aaPredicted RBP23.62■■□□□ 1.37
TTC39C-205ENST00000578150 KIF1BPQ96EK5 621 aa23.62■■□□□ 1.37
TTC39C-205ENST00000578150 TRIM34Q9BYJ4 488 aa23.62■■□□□ 1.37
TTC39C-205ENST00000578150 RCAN3Q9UKA8 241 aa23.62■■□□□ 1.37
TTC39C-205ENST00000578150 COG6Q9Y2V7 657 aa23.62■■□□□ 1.37
TTC39C-205ENST00000578150 MKI67P46013 3256 aaKnown RBP23.62■■□□□ 1.37
TTC39C-205ENST00000578150 SIPA1L1O43166 1804 aa23.61■■□□□ 1.37
TTC39C-205ENST00000578150 HLA-DOAP06340 250 aa23.61■■□□□ 1.37
TTC39C-205ENST00000578150 SH3D19Q5HYK7 790 aa23.61■■□□□ 1.37
TTC39C-205ENST00000578150 MAGEB6Q8N7X4 407 aa23.61■■□□□ 1.37
TTC39C-205ENST00000578150 WDR18Q9BV38 432 aa23.61■■□□□ 1.37
TTC39C-205ENST00000578150 IL1RAPL2Q9NP60 686 aa23.61■■□□□ 1.37
TTC39C-205ENST00000578150 PALD1Q9ULE6 856 aa23.61■■□□□ 1.37
TTC39C-205ENST00000578150 LOC285556D6RIA3 1793 aa23.6■■□□□ 1.37
TTC39C-205ENST00000578150 SLC34A2O95436 690 aa23.6■■□□□ 1.37
TTC39C-205ENST00000578150 GRK4P32298 578 aa23.6■■□□□ 1.37
TTC39C-205ENST00000578150 DYNLL1P63167 89 aaKnown RBP23.6■■□□□ 1.37
TTC39C-205ENST00000578150 TTF1Q15361 905 aaPredicted RBP23.6■■□□□ 1.37
TTC39C-205ENST00000578150 TREML2Q5T2D2 321 aa23.6■■□□□ 1.37
TTC39C-205ENST00000578150 MGAMO43451 1857 aa23.6■■□□□ 1.37
TTC39C-205ENST00000578150 HMGCS2P54868 508 aa23.59■■□□□ 1.37
TTC39C-205ENST00000578150 PRKCZQ05513 592 aa23.59■■□□□ 1.37
TTC39C-205ENST00000578150 PPIL4Q8WUA2 492 aaKnown RBP eCLIP23.59■■□□□ 1.37
TTC39C-205ENST00000578150 ANTXR1Q9H6X2 564 aa23.59■■□□□ 1.37
TTC39C-205ENST00000578150 DNAJC18Q9H819 358 aa23.59■■□□□ 1.37
TTC39C-205ENST00000578150 RAB11FIP3O75154 756 aa23.58■■□□□ 1.37
TTC39C-205ENST00000578150 GCLCP48506 637 aaPredicted RBP23.58■■□□□ 1.37
TTC39C-205ENST00000578150 FAM110CQ1W6H9 321 aa23.58■■□□□ 1.37
TTC39C-205ENST00000578150 SIRT2Q8IXJ6 389 aa23.58■■□□□ 1.37
TTC39C-205ENST00000578150 MIGA1Q8NAN2 632 aa23.58■■□□□ 1.37
TTC39C-205ENST00000578150 SLAIN1Q8ND83 568 aa23.58■■□□□ 1.37
TTC39C-205ENST00000578150 NDUFB9Q9Y6M9 179 aa23.58■■□□□ 1.37
TTC39C-205ENST00000578150 MYCP01106 439 aaPredicted RBP23.57■■□□□ 1.36
TTC39C-205ENST00000578150 IFIT2P09913 472 aaKnown RBP23.57■■□□□ 1.36
TTC39C-205ENST00000578150 USP5P45974 858 aa23.57■■□□□ 1.36
TTC39C-205ENST00000578150 BACE1P56817 501 aa23.57■■□□□ 1.36
TTC39C-205ENST00000578150 ANKRD13CQ8N6S4 541 aa23.57■■□□□ 1.36
TTC39C-205ENST00000578150 SAP30BPQ9UHR5 308 aaKnown RBP23.57■■□□□ 1.36
TTC39C-205ENST00000578150 C19orf81C9J6K1 198 aa23.56■■□□□ 1.36
TTC39C-205ENST00000578150 TNPO2O14787 897 aaKnown RBP23.56■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms