RNA–Protein interactions for RNA: ENST00000577901.5

VAPA-204, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 917 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-204ENST00000577901 ERICH6Q7L0X2 663 aa19.63■□□□□ 0.73
VAPA-204ENST00000577901 SLAIN1Q8ND83 568 aa19.63■□□□□ 0.73
VAPA-204ENST00000577901 DPF3Q92784 378 aa19.63■□□□□ 0.73
VAPA-204ENST00000577901 RNF208Q9H0X6 261 aa19.63■□□□□ 0.73
VAPA-204ENST00000577901 GPR108Q9NPR9 543 aa19.63■□□□□ 0.73
VAPA-204ENST00000577901 GABRQQ9UN88 632 aa19.63■□□□□ 0.73
VAPA-204ENST00000577901 GPR75-ASB3A0A0A6YYF3 556 aa19.62■□□□□ 0.73
VAPA-204ENST00000577901 TRIM75PA6NK02 468 aa19.62■□□□□ 0.73
VAPA-204ENST00000577901 RRP1P56182 461 aaKnown RBP19.62■□□□□ 0.73
VAPA-204ENST00000577901 HSP90AB4PQ58FF6 505 aa19.62■□□□□ 0.73
VAPA-204ENST00000577901 RHBDL3P58872 404 aa19.61■□□□□ 0.73
VAPA-204ENST00000577901 ERC1Q8IUD2 1116 aa19.61■□□□□ 0.73
VAPA-204ENST00000577901 SMCR8Q8TEV9 937 aaPredicted RBP19.61■□□□□ 0.73
VAPA-204ENST00000577901 ZNF384Q8TF68 577 aa19.61■□□□□ 0.73
VAPA-204ENST00000577901 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.61■□□□□ 0.73
VAPA-204ENST00000577901 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.61■□□□□ 0.73
VAPA-204ENST00000577901 ADCY3O60266 1144 aa19.6■□□□□ 0.73
VAPA-204ENST00000577901 TBC1D12O60347 775 aa19.6■□□□□ 0.73
VAPA-204ENST00000577901 TNNI3KQ59H18 835 aa19.6■□□□□ 0.73
VAPA-204ENST00000577901 UBE2Q1Q7Z7E8 422 aa19.6■□□□□ 0.73
VAPA-204ENST00000577901 HMG20BQ9P0W2 317 aa19.6■□□□□ 0.73
VAPA-204ENST00000577901 FPGT-TNNI3KV9GXZ4 949 aa19.6■□□□□ 0.73
VAPA-204ENST00000577901 DOCK1Q14185 1865 aa19.6■□□□□ 0.73
VAPA-204ENST00000577901 TNPO2O14787 897 aaKnown RBP19.59■□□□□ 0.73
VAPA-204ENST00000577901 NPM3O75607 178 aaKnown RBP19.59■□□□□ 0.73
VAPA-204ENST00000577901 FLT3LGP49771 235 aa19.59■□□□□ 0.73
VAPA-204ENST00000577901 GSTO1P78417 241 aa19.59■□□□□ 0.73
VAPA-204ENST00000577901 CHRDL2Q6WN34 429 aa19.59■□□□□ 0.73
VAPA-204ENST00000577901 CCDC84Q86UT8 332 aaPredicted RBP19.59■□□□□ 0.73
VAPA-204ENST00000577901 SPATA5Q8NB90 893 aa19.59■□□□□ 0.73
VAPA-204ENST00000577901 HTATIP2Q9BUP3 242 aa19.59■□□□□ 0.73
VAPA-204ENST00000577901 UNC93B1Q9H1C4 597 aa19.59■□□□□ 0.73
VAPA-204ENST00000577901 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.59■□□□□ 0.73
VAPA-204ENST00000577901 AGTPBP1Q9UPW5 1226 aa19.59■□□□□ 0.73
VAPA-204ENST00000577901 EXOC6BQ9Y2D4 811 aa19.59■□□□□ 0.73
VAPA-204ENST00000577901 MGAMO43451 1857 aa19.58■□□□□ 0.73
VAPA-204ENST00000577901 ELNP15502 786 aa19.58■□□□□ 0.72
VAPA-204ENST00000577901 TBC1D9Q6ZT07 1266 aa19.58■□□□□ 0.72
VAPA-204ENST00000577901 U2AF1L4Q8WU68 220 aaKnown RBP19.58■□□□□ 0.72
VAPA-204ENST00000577901 NSUN4Q96CB9 384 aaKnown RBP19.58■□□□□ 0.72
VAPA-204ENST00000577901 FAM196BA6NMK8 535 aa19.57■□□□□ 0.72
VAPA-204ENST00000577901 MAP4K4O95819 1239 aaPredicted RBP19.57■□□□□ 0.72
VAPA-204ENST00000577901 LDHCP07864 332 aa19.57■□□□□ 0.72
VAPA-204ENST00000577901 UQCRFS1P1P0C7P4 283 aa19.57■□□□□ 0.72
VAPA-204ENST00000577901 IRF5Q13568 498 aa19.57■□□□□ 0.72
VAPA-204ENST00000577901 CCDC158Q5M9N0 1113 aa19.57■□□□□ 0.72
VAPA-204ENST00000577901 TREML2Q5T2D2 321 aa19.57■□□□□ 0.72
VAPA-204ENST00000577901 PI16Q6UXB8 463 aa19.57■□□□□ 0.72
VAPA-204ENST00000577901 SIRT2Q8IXJ6 389 aa19.57■□□□□ 0.72
VAPA-204ENST00000577901 PXYLP1Q8TE99 480 aa19.57■□□□□ 0.72
VAPA-204ENST00000577901 PHIPQ8WWQ0 1821 aa19.57■□□□□ 0.72
VAPA-204ENST00000577901 FARP2O94887 1054 aaPredicted RBP19.56■□□□□ 0.72
VAPA-204ENST00000577901 SGPL1O95470 568 aa19.56■□□□□ 0.72
VAPA-204ENST00000577901 INHAP05111 366 aa19.56■□□□□ 0.72
VAPA-204ENST00000577901 ANKRD13CQ8N6S4 541 aa19.56■□□□□ 0.72
VAPA-204ENST00000577901 OSBPL5Q9H0X9 879 aaPredicted RBP19.56■□□□□ 0.72
VAPA-204ENST00000577901 RAI14Q9P0K7 980 aa19.56■□□□□ 0.72
VAPA-204ENST00000577901 PNMA3Q9UL41 463 aa19.56■□□□□ 0.72
VAPA-204ENST00000577901 SZT2Q5T011 3432 aa19.56■□□□□ 0.72
VAPA-204ENST00000577901 PTPRFP10586 1907 aa19.55■□□□□ 0.72
VAPA-204ENST00000577901 RAB11FIP3O75154 756 aa19.55■□□□□ 0.72
VAPA-204ENST00000577901 ARID4AP29374 1257 aaPredicted RBP19.55■□□□□ 0.72
VAPA-204ENST00000577901 RANBP2P49792 3224 aaKnown RBP19.55■□□□□ 0.72
VAPA-204ENST00000577901 SPP2Q13103 211 aa19.55■□□□□ 0.72
VAPA-204ENST00000577901 PROCA1Q8NCQ7 364 aaPredicted RBP19.55■□□□□ 0.72
VAPA-204ENST00000577901 COA7Q96BR5 231 aa19.55■□□□□ 0.72
VAPA-204ENST00000577901 RBM27Q9P2N5 1060 aaKnown RBP19.55■□□□□ 0.72
VAPA-204ENST00000577901 COL2A1P02458 1487 aaPredicted RBP19.54■□□□□ 0.72
VAPA-204ENST00000577901 TTC39AQ5SRH9 613 aa19.54■□□□□ 0.72
VAPA-204ENST00000577901 TEX11Q8IYF3 940 aa19.54■□□□□ 0.72
VAPA-204ENST00000577901 ZNF280CQ8ND82 737 aa19.54■□□□□ 0.72
VAPA-204ENST00000577901 KIF1BPQ96EK5 621 aa19.54■□□□□ 0.72
VAPA-204ENST00000577901 DBNDD2Q9BQY9 259 aa19.54■□□□□ 0.72
VAPA-204ENST00000577901 TBC1D2Q9BYX2 928 aa19.54■□□□□ 0.72
VAPA-204ENST00000577901 TAOK2Q9UL54 1235 aa19.54■□□□□ 0.72
VAPA-204ENST00000577901 TFRCP02786 760 aaKnown RBP19.53■□□□□ 0.72
VAPA-204ENST00000577901 CAP2P40123 477 aa19.53■□□□□ 0.72
VAPA-204ENST00000577901 MCAMP43121 646 aa19.53■□□□□ 0.72
VAPA-204ENST00000577901 FAM110CQ1W6H9 321 aa19.53■□□□□ 0.72
VAPA-204ENST00000577901 RHPN1Q8TCX5 695 aa19.53■□□□□ 0.72
VAPA-204ENST00000577901 EAF2Q96CJ1 260 aaPredicted RBP19.53■□□□□ 0.72
VAPA-204ENST00000577901 DEFB118Q96PH6 123 aa19.53■□□□□ 0.72
VAPA-204ENST00000577901 CCDC8Q9H0W5 538 aaPredicted RBP19.53■□□□□ 0.72
VAPA-204ENST00000577901 LRP2BPQ9P2M1 347 aa19.53■□□□□ 0.72
VAPA-204ENST00000577901 NR2E3Q9Y5X4 410 aa19.53■□□□□ 0.72
VAPA-204ENST00000577901 APBB1O00213 710 aa19.52■□□□□ 0.72
VAPA-204ENST00000577901 CAPN2P17655 700 aa19.52■□□□□ 0.72
VAPA-204ENST00000577901 GCLCP48506 637 aaPredicted RBP19.52■□□□□ 0.72
VAPA-204ENST00000577901 HMGCS2P54868 508 aa19.52■□□□□ 0.72
VAPA-204ENST00000577901 PABPC4Q13310 644 aaKnown RBP eCLIP19.52■□□□□ 0.72
VAPA-204ENST00000577901 RRP1BQ14684 758 aaKnown RBP19.52■□□□□ 0.72
VAPA-204ENST00000577901 AACSQ86V21 672 aa19.52■□□□□ 0.72
VAPA-204ENST00000577901 CLASRPQ8N2M8 674 aaKnown RBP19.52■□□□□ 0.72
VAPA-204ENST00000577901 SH3RF3Q8TEJ3 882 aaPredicted RBP19.52■□□□□ 0.72
VAPA-204ENST00000577901 PAK6Q9NQU5 681 aaPredicted RBP19.52■□□□□ 0.72
VAPA-204ENST00000577901 CEP290O15078 2479 aa19.51■□□□□ 0.71
VAPA-204ENST00000577901 USP17L5A8MUK1 530 aa19.51■□□□□ 0.71
VAPA-204ENST00000577901 ZNF512BQ96KM6 892 aaPredicted RBP19.51■□□□□ 0.71
VAPA-204ENST00000577901 NOL10Q9BSC4 688 aaKnown RBP19.51■□□□□ 0.71
VAPA-204ENST00000577901 IL1RAPL2Q9NP60 686 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms