RNA–Protein interactions for RNA: ENST00000577779.1

PPP4R1-206, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 2

Gene PPP4R1, Length 481 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-206ENST00000577779 SLC4A10Q6U841 1118 aa17.7■□□□□ 0.42
PPP4R1-206ENST00000577779 IDI2Q9BXS1 227 aa17.7■□□□□ 0.42
PPP4R1-206ENST00000577779 SRCIN1Q9C0H9 1055 aa17.7■□□□□ 0.42
PPP4R1-206ENST00000577779 ASCC2Q9H1I8 757 aaPredicted RBP17.7■□□□□ 0.42
PPP4R1-206ENST00000577779 BICC1Q9H694 974 aaKnown RBP17.7■□□□□ 0.42
PPP4R1-206ENST00000577779 LOC285556D6RIA3 1793 aa17.7■□□□□ 0.42
PPP4R1-206ENST00000577779 DDTLA6NHG4 134 aaPredicted RBP17.69■□□□□ 0.42
PPP4R1-206ENST00000577779 VAMP4O75379 141 aa17.69■□□□□ 0.42
PPP4R1-206ENST00000577779 XRCC5P13010 732 aaKnown RBP17.69■□□□□ 0.42
PPP4R1-206ENST00000577779 FOSL2P15408 326 aa17.69■□□□□ 0.42
PPP4R1-206ENST00000577779 ZKSCAN1P17029 563 aaPredicted RBP17.69■□□□□ 0.42
PPP4R1-206ENST00000577779 FGFR2P21802 821 aa17.69■□□□□ 0.42
PPP4R1-206ENST00000577779 SPP2Q13103 211 aa17.69■□□□□ 0.42
PPP4R1-206ENST00000577779 LHX8Q68G74 356 aa17.69■□□□□ 0.42
PPP4R1-206ENST00000577779 WWC1Q8IX03 1113 aa17.69■□□□□ 0.42
PPP4R1-206ENST00000577779 TRMT44Q8IYL2 757 aaKnown RBP17.69■□□□□ 0.42
PPP4R1-206ENST00000577779 NUDT12Q9BQG2 462 aa17.69■□□□□ 0.42
PPP4R1-206ENST00000577779 PRKAG2Q9UGJ0 569 aa17.69■□□□□ 0.42
PPP4R1-206ENST00000577779 MAST2Q6P0Q8 1798 aa17.68■□□□□ 0.42
PPP4R1-206ENST00000577779 TNFRSF10AO00220 468 aa17.68■□□□□ 0.42
PPP4R1-206ENST00000577779 NBPF7P0C2Y1 421 aaPredicted RBP17.68■□□□□ 0.42
PPP4R1-206ENST00000577779 SLC5A1P13866 664 aa17.68■□□□□ 0.42
PPP4R1-206ENST00000577779 CCND3P30281 292 aaPredicted RBP17.68■□□□□ 0.42
PPP4R1-206ENST00000577779 HMGCS2P54868 508 aa17.68■□□□□ 0.42
PPP4R1-206ENST00000577779 DDX10Q13206 875 aaKnown RBP17.68■□□□□ 0.42
PPP4R1-206ENST00000577779 CCDC27Q2M243 656 aa17.68■□□□□ 0.42
PPP4R1-206ENST00000577779 SOCS4Q8WXH5 440 aa17.68■□□□□ 0.42
PPP4R1-206ENST00000577779 SENP6Q9GZR1 1112 aaPredicted RBP17.68■□□□□ 0.42
PPP4R1-206ENST00000577779 MORF4L1Q9UBU8 362 aa17.68■□□□□ 0.42
PPP4R1-206ENST00000577779 RAPGEFL1Q9UHV5 662 aa17.68■□□□□ 0.42
PPP4R1-206ENST00000577779 IL16Q14005 1332 aa17.68■□□□□ 0.42
PPP4R1-206ENST00000577779 FANCIQ9NVI1 1328 aa17.68■□□□□ 0.42
PPP4R1-206ENST00000577779 PDE3AQ14432 1141 aa17.67■□□□□ 0.42
PPP4R1-206ENST00000577779 RABL6Q3YEC7 729 aaPredicted RBP17.67■□□□□ 0.42
PPP4R1-206ENST00000577779 ZNF280CQ8ND82 737 aa17.67■□□□□ 0.42
PPP4R1-206ENST00000577779 KLHDC4Q8TBB5 520 aa17.67■□□□□ 0.42
PPP4R1-206ENST00000577779 TTYH1Q9H313 450 aaPredicted RBP17.67■□□□□ 0.42
PPP4R1-206ENST00000577779 RFX7Q2KHR2 1363 aa17.66■□□□□ 0.42
PPP4R1-206ENST00000577779 MYH2Q9UKX2 1941 aa17.66■□□□□ 0.42
PPP4R1-206ENST00000577779 PICALMQ13492 652 aa17.66■□□□□ 0.42
PPP4R1-206ENST00000577779 SHHQ15465 462 aa17.66■□□□□ 0.42
PPP4R1-206ENST00000577779 TJAP1Q5JTD0 557 aa17.66■□□□□ 0.42
PPP4R1-206ENST00000577779 LPIN2Q92539 896 aa17.66■□□□□ 0.42
PPP4R1-206ENST00000577779 LTBP2Q14767 1821 aa17.65■□□□□ 0.42
PPP4R1-206ENST00000577779 ATN1P54259 1190 aaPredicted RBP17.65■□□□□ 0.42
PPP4R1-206ENST00000577779 IRX3P78415 501 aaPredicted RBP17.65■□□□□ 0.42
PPP4R1-206ENST00000577779 ANKRD44Q8N8A2 993 aa17.65■□□□□ 0.42
PPP4R1-206ENST00000577779 DDX4Q9NQI0 724 aaKnown RBP17.65■□□□□ 0.42
PPP4R1-206ENST00000577779 FRMPD3Q5JV73 1810 aa17.65■□□□□ 0.42
PPP4R1-206ENST00000577779 FAM196BA6NMK8 535 aa17.64■□□□□ 0.41
PPP4R1-206ENST00000577779 PLA2G5P39877 138 aa17.64■□□□□ 0.41
PPP4R1-206ENST00000577779 SMAD3P84022 425 aaKnown RBP17.64■□□□□ 0.41
PPP4R1-206ENST00000577779 EXOSC9Q06265 439 aaKnown RBP17.64■□□□□ 0.41
PPP4R1-206ENST00000577779 CCL14Q16627 93 aa17.64■□□□□ 0.41
PPP4R1-206ENST00000577779 C9orf50Q5SZB4 431 aa17.64■□□□□ 0.41
PPP4R1-206ENST00000577779 GPRC5AQ8NFJ5 357 aa17.64■□□□□ 0.41
PPP4R1-206ENST00000577779 TBC1D2Q9BYX2 928 aa17.64■□□□□ 0.41
PPP4R1-206ENST00000577779 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.64■□□□□ 0.416e-7■■■□□ 18.3
PPP4R1-206ENST00000577779 GNL3LQ9NVN8 582 aaKnown RBP17.64■□□□□ 0.41
PPP4R1-206ENST00000577779 UTYO14607 1347 aa17.64■□□□□ 0.41
PPP4R1-206ENST00000577779 SALL1Q9NSC2 1324 aa17.64■□□□□ 0.41
PPP4R1-206ENST00000577779 TBC1D12O60347 775 aa17.63■□□□□ 0.41
PPP4R1-206ENST00000577779 PEX10O60683 326 aa17.63■□□□□ 0.41
PPP4R1-206ENST00000577779 MAPK4P31152 587 aa17.63■□□□□ 0.41
PPP4R1-206ENST00000577779 RGS2P41220 211 aa17.63■□□□□ 0.41
PPP4R1-206ENST00000577779 CCAR1Q8IX12 1150 aaKnown RBP17.63■□□□□ 0.41
PPP4R1-206ENST00000577779 OSBPL5Q9H0X9 879 aaPredicted RBP17.63■□□□□ 0.41
PPP4R1-206ENST00000577779 GAKO14976 1311 aa17.63■□□□□ 0.41
PPP4R1-206ENST00000577779 ATAD5Q96QE3 1844 aa17.63■□□□□ 0.41
PPP4R1-206ENST00000577779 RTP1P59025 263 aa17.62■□□□□ 0.41
PPP4R1-206ENST00000577779 SH3D19Q5HYK7 790 aa17.62■□□□□ 0.41
PPP4R1-206ENST00000577779 DZIP1Q86YF9 867 aaKnown RBP17.62■□□□□ 0.41
PPP4R1-206ENST00000577779 USP6NLQ92738 828 aa17.62■□□□□ 0.41
PPP4R1-206ENST00000577779 FAM122AQ96E09 287 aa17.62■□□□□ 0.41
PPP4R1-206ENST00000577779 P2RX7Q99572 595 aaKnown RBP17.62■□□□□ 0.41
PPP4R1-206ENST00000577779 USP17L5A8MUK1 530 aa17.61■□□□□ 0.41
PPP4R1-206ENST00000577779 HERVK_113P62684 666 aa17.61■□□□□ 0.41
PPP4R1-206ENST00000577779 CACNB1Q02641 598 aaPredicted RBP17.61■□□□□ 0.41
PPP4R1-206ENST00000577779 SLF2Q8IX21 1173 aa17.61■□□□□ 0.41
PPP4R1-206ENST00000577779 APBA2Q99767 749 aa17.61■□□□□ 0.41
PPP4R1-206ENST00000577779 PRKRIP1Q9H875 184 aaPredicted RBP17.61■□□□□ 0.41
PPP4R1-206ENST00000577779 TXNRD2Q9NNW7 524 aa17.61■□□□□ 0.41
PPP4R1-206ENST00000577779 DENND2AQ9ULE3 1009 aa17.61■□□□□ 0.41
PPP4R1-206ENST00000577779 ATP11BQ9Y2G3 1177 aa17.61■□□□□ 0.41
PPP4R1-206ENST00000577779 CHD9Q3L8U1 2897 aa17.61■□□□□ 0.41
PPP4R1-206ENST00000577779 TMEM265A0A087WTH1 108 aa17.6■□□□□ 0.41
PPP4R1-206ENST00000577779 EYA2O00167 538 aa17.6■□□□□ 0.41
PPP4R1-206ENST00000577779 BTDP43251 543 aa17.6■□□□□ 0.41
PPP4R1-206ENST00000577779 MORN1Q5T089 497 aa17.6■□□□□ 0.41
PPP4R1-206ENST00000577779 GPR142Q7Z601 462 aa17.6■□□□□ 0.41
PPP4R1-206ENST00000577779 ZGPATQ8N5A5 531 aaKnown RBP17.6■□□□□ 0.41
PPP4R1-206ENST00000577779 AS3MTQ9HBK9 375 aa17.6■□□□□ 0.41
PPP4R1-206ENST00000577779 PRDM5Q9NQX1 630 aaPredicted RBP17.6■□□□□ 0.41
PPP4R1-206ENST00000577779 SEMA3EO15041 775 aa17.59■□□□□ 0.41
PPP4R1-206ENST00000577779 CAP2P40123 477 aa17.59■□□□□ 0.41
PPP4R1-206ENST00000577779 MTMR2Q13614 643 aa17.59■□□□□ 0.41
PPP4R1-206ENST00000577779 ATP2B3Q16720 1220 aa17.59■□□□□ 0.41
PPP4R1-206ENST00000577779 MFSD14CQ5VZR4 134 aa17.59■□□□□ 0.41
PPP4R1-206ENST00000577779 PLEKHH3Q7Z736 793 aa17.59■□□□□ 0.41
PPP4R1-206ENST00000577779 USP38Q8NB14 1042 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms