RNA–Protein interactions for RNA: ENST00000577716.5

RNF43-203, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF43, Length 4,367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-203ENST00000577716 DENND2AQ9ULE3 1009 aa12.27□□□□□ -0.45
RNF43-203ENST00000577716 USP6P35125 1406 aa12.27□□□□□ -0.45
RNF43-203ENST00000577716 CDK12Q9NYV4 1490 aaPredicted RBP12.27□□□□□ -0.45
RNF43-203ENST00000577716 GOLGA6L10A0A0M3HER8 536 aa12.27□□□□□ -0.45
RNF43-203ENST00000577716 ZEB2O60315 1214 aa12.27□□□□□ -0.45
RNF43-203ENST00000577716 LDHBP07195 334 aaKnown RBP12.27□□□□□ -0.45
RNF43-203ENST00000577716 PLCD1P51178 756 aa12.27□□□□□ -0.45
RNF43-203ENST00000577716 LONRF3Q496Y0 759 aa12.27□□□□□ -0.45
RNF43-203ENST00000577716 IFT81Q8WYA0 676 aa12.27□□□□□ -0.45
RNF43-203ENST00000577716 SAMM50Q9Y512 469 aa12.27□□□□□ -0.45
RNF43-203ENST00000577716 ZRSR2Q15696 482 aaKnown RBP12.26□□□□□ -0.45
RNF43-203ENST00000577716 ZNF827Q17R98 1081 aa12.26□□□□□ -0.45
RNF43-203ENST00000577716 SPATA5Q8NB90 893 aa12.26□□□□□ -0.45
RNF43-203ENST00000577716 NSUN7Q8NE18 718 aaKnown RBP12.26□□□□□ -0.45
RNF43-203ENST00000577716 FANCLQ9NW38 375 aa12.26□□□□□ -0.45
RNF43-203ENST00000577716 GLI2P10070 1586 aa12.26□□□□□ -0.45
RNF43-203ENST00000577716 PRAMEF22A3QJZ6 481 aa12.26□□□□□ -0.45
RNF43-203ENST00000577716 CCDC172P0C7W6 258 aa12.26□□□□□ -0.45
RNF43-203ENST00000577716 RBM6P78332 1123 aaKnown RBP12.26□□□□□ -0.45
RNF43-203ENST00000577716 SLF1Q9BQI6 1058 aa12.26□□□□□ -0.45
RNF43-203ENST00000577716 FTOQ9C0B1 505 aaKnown RBP eCLIP12.26□□□□□ -0.45
RNF43-203ENST00000577716 EHMT1Q9H9B1 1298 aa12.26□□□□□ -0.45
RNF43-203ENST00000577716 CLIC4Q9Y696 253 aa12.26□□□□□ -0.45
RNF43-203ENST00000577716 TSPOAP1O95153 1857 aa12.26□□□□□ -0.45
RNF43-203ENST00000577716 PLEKHG1Q9ULL1 1385 aa12.26□□□□□ -0.45
RNF43-203ENST00000577716 BTBD18B2RXH4 712 aa12.26□□□□□ -0.45
RNF43-203ENST00000577716 TUBB2AQ13885 445 aa12.26□□□□□ -0.45
RNF43-203ENST00000577716 PPP2R5BQ15173 497 aa12.26□□□□□ -0.45
RNF43-203ENST00000577716 NECTIN1Q15223 517 aa12.26□□□□□ -0.45
RNF43-203ENST00000577716 NOSTRINQ8IVI9 506 aa12.26□□□□□ -0.45
RNF43-203ENST00000577716 IPO4Q8TEX9 1081 aaKnown RBP12.26□□□□□ -0.45
RNF43-203ENST00000577716 TUBB2BQ9BVA1 445 aa12.26□□□□□ -0.45
RNF43-203ENST00000577716 TRAF5O00463 557 aa12.25□□□□□ -0.45
RNF43-203ENST00000577716 FERMT2Q96AC1 680 aa12.25□□□□□ -0.45
RNF43-203ENST00000577716 KIF2CQ99661 725 aa12.25□□□□□ -0.45
RNF43-203ENST00000577716 DESI2Q9BSY9 194 aa12.25□□□□□ -0.45
RNF43-203ENST00000577716 CPSF1Q10570 1443 aaKnown RBP12.25□□□□□ -0.45
RNF43-203ENST00000577716 POLA2Q14181 598 aa12.25□□□□□ -0.45
RNF43-203ENST00000577716 ZNF654Q8IZM8 581 aa12.25□□□□□ -0.45
RNF43-203ENST00000577716 CMTR1Q8N1G2 835 aaKnown RBP12.25□□□□□ -0.45
RNF43-203ENST00000577716 MICALL1Q8N3F8 863 aa12.25□□□□□ -0.45
RNF43-203ENST00000577716 CLIC6Q96NY7 704 aa12.25□□□□□ -0.45
RNF43-203ENST00000577716 ADGRB3O60242 1522 aa12.25□□□□□ -0.45
RNF43-203ENST00000577716 A0A1W2PQ27 194 aa12.25□□□□□ -0.45
RNF43-203ENST00000577716 A0A1W2PQ64 194 aa12.25□□□□□ -0.45
RNF43-203ENST00000577716 A0A1W2PQD8 194 aa12.25□□□□□ -0.45
RNF43-203ENST00000577716 PARP10Q53GL7 1025 aa12.25□□□□□ -0.45
RNF43-203ENST00000577716 KRBA2Q6ZNG9 492 aa12.25□□□□□ -0.45
RNF43-203ENST00000577716 SV2BQ7L1I2 683 aa12.25□□□□□ -0.45
RNF43-203ENST00000577716 FAM76AQ8TAV0 307 aa12.25□□□□□ -0.45
RNF43-203ENST00000577716 TBC1D5Q92609 795 aa12.25□□□□□ -0.45
RNF43-203ENST00000577716 RTEL1Q9NZ71 1219 aa12.25□□□□□ -0.45
RNF43-203ENST00000577716 RCOR1Q9UKL0 485 aa12.25□□□□□ -0.45
RNF43-203ENST00000577716 SASH1O94885 1247 aa12.25□□□□□ -0.45
RNF43-203ENST00000577716 PDE6AP16499 860 aa12.25□□□□□ -0.45
RNF43-203ENST00000577716 CFAP58Q5T655 872 aa12.25□□□□□ -0.45
RNF43-203ENST00000577716 C11orf57Q6ZUT1 292 aaPredicted RBP12.25□□□□□ -0.45
RNF43-203ENST00000577716 ZNF804AQ7Z570 1209 aa12.25□□□□□ -0.45
RNF43-203ENST00000577716 PCDHA5Q9Y5H7 936 aa12.25□□□□□ -0.45
RNF43-203ENST00000577716 ZMYM1Q5SVZ6 1142 aa12.24□□□□□ -0.45
RNF43-203ENST00000577716 ZDHHC9Q9Y397 364 aa12.24□□□□□ -0.45
RNF43-203ENST00000577716 A2ML1A8K2U0 1454 aa12.24□□□□□ -0.45
RNF43-203ENST00000577716 EZRP15311 586 aaKnown RBP12.24□□□□□ -0.45
RNF43-203ENST00000577716 CALRP27797 417 aaKnown RBP12.24□□□□□ -0.45
RNF43-203ENST00000577716 PPP1R2P41236 205 aa12.24□□□□□ -0.45
RNF43-203ENST00000577716 DPCR1Q3MIW9 517 aa12.24□□□□□ -0.45
RNF43-203ENST00000577716 NYXQ9GZU5 481 aa12.24□□□□□ -0.45
RNF43-203ENST00000577716 BTG4Q9NY30 223 aa12.24□□□□□ -0.45
RNF43-203ENST00000577716 PLCG2P16885 1265 aa12.24□□□□□ -0.45
RNF43-203ENST00000577716 PUS3Q9BZE2 481 aaKnown RBP12.24□□□□□ -0.45
RNF43-203ENST00000577716 BLZF1Q9H2G9 400 aa12.24□□□□□ -0.45
RNF43-203ENST00000577716 PARP1P09874 1014 aaKnown RBP12.23□□□□□ -0.45
RNF43-203ENST00000577716 OAS2P29728 719 aaKnown RBP12.23□□□□□ -0.45
RNF43-203ENST00000577716 ARFGAP2Q8N6H7 521 aa12.23□□□□□ -0.45
RNF43-203ENST00000577716 CCDC155Q8N6L0 562 aa12.23□□□□□ -0.45
RNF43-203ENST00000577716 JAKMIP2Q96AA8 810 aa12.23□□□□□ -0.45
RNF43-203ENST00000577716 ANKRD2Q9GZV1 360 aa12.23□□□□□ -0.45
RNF43-203ENST00000577716 HOOK3Q86VS8 718 aa12.23□□□□□ -0.45
RNF43-203ENST00000577716 LMBR1Q8WVP7 490 aa12.23□□□□□ -0.45
RNF43-203ENST00000577716 ABCA9Q8IUA7 1624 aa12.23□□□□□ -0.45
RNF43-203ENST00000577716 HIBADHP31937 336 aaKnown RBP12.23□□□□□ -0.45
RNF43-203ENST00000577716 RAPGEF1Q13905 1077 aa12.23□□□□□ -0.45
RNF43-203ENST00000577716 CLEC17AQ6ZS10 378 aa12.23□□□□□ -0.45
RNF43-203ENST00000577716 IFNL3Q8IZI9 196 aa12.23□□□□□ -0.45
RNF43-203ENST00000577716 OTUD6BQ8N6M0 293 aa12.23□□□□□ -0.45
RNF43-203ENST00000577716 PLVAPQ9BX97 442 aa12.23□□□□□ -0.45
RNF43-203ENST00000577716 AATFQ9NY61 560 aaKnown RBP eCLIP12.23□□□□□ -0.45
RNF43-203ENST00000577716 WWC3Q9ULE0 1092 aa12.23□□□□□ -0.45
RNF43-203ENST00000577716 PPP2R2CQ9Y2T4 447 aa12.23□□□□□ -0.45
RNF43-203ENST00000577716 ZMYM6O95789 1325 aa12.23□□□□□ -0.45
RNF43-203ENST00000577716 KRT13P13646 458 aa12.23□□□□□ -0.45
RNF43-203ENST00000577716 CTNNA2P26232 953 aa12.23□□□□□ -0.45
RNF43-203ENST00000577716 UBE4AQ14139 1066 aa12.23□□□□□ -0.45
RNF43-203ENST00000577716 CCDC174Q6PII3 467 aa12.23□□□□□ -0.45
RNF43-203ENST00000577716 HS2ST1Q7LGA3 356 aa12.23□□□□□ -0.45
RNF43-203ENST00000577716 TMEM87AQ8NBN3 555 aa12.23□□□□□ -0.45
RNF43-203ENST00000577716 TSGA10Q9BZW7 698 aa12.23□□□□□ -0.45
RNF43-203ENST00000577716 PSDA5PKW4 1024 aaPredicted RBP12.22□□□□□ -0.45
RNF43-203ENST00000577716 TXKP42681 527 aa12.22□□□□□ -0.45
RNF43-203ENST00000577716 SLC39A14Q15043 492 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms