RNA–Protein interactions for RNA: ENST00000577636.5

SS18-207, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-207ENST00000577636 GLRX3O76003 335 aaKnown RBP12.25□□□□□ -0.45
SS18-207ENST00000577636 SGPL1O95470 568 aa12.25□□□□□ -0.45
SS18-207ENST00000577636 SLC5A1P13866 664 aa12.25□□□□□ -0.45
SS18-207ENST00000577636 ELNP15502 786 aa12.25□□□□□ -0.45
SS18-207ENST00000577636 IL15P40933 162 aaPredicted RBP12.25□□□□□ -0.45
SS18-207ENST00000577636 FLT3LGP49771 235 aa12.25□□□□□ -0.45
SS18-207ENST00000577636 MOGSQ13724 837 aa12.25□□□□□ -0.45
SS18-207ENST00000577636 PUM3Q15397 648 aaKnown RBP12.25□□□□□ -0.45
SS18-207ENST00000577636 GPAT2Q6NUI2 795 aa12.25□□□□□ -0.45
SS18-207ENST00000577636 TBC1D9Q6ZT07 1266 aa12.25□□□□□ -0.45
SS18-207ENST00000577636 ZSCAN29Q8IWY8 852 aaPredicted RBP12.25□□□□□ -0.45
SS18-207ENST00000577636 ZFPM1Q8IX07 1006 aa12.25□□□□□ -0.45
SS18-207ENST00000577636 VGLL2Q8N8G2 317 aa12.25□□□□□ -0.45
SS18-207ENST00000577636 SLAIN1Q8ND83 568 aa12.25□□□□□ -0.45
SS18-207ENST00000577636 WDR66Q8TBY9 1149 aa12.25□□□□□ -0.45
SS18-207ENST00000577636 PICK1Q9NRD5 415 aa12.25□□□□□ -0.45
SS18-207ENST00000577636 ECHDC1Q9NTX5 307 aa12.25□□□□□ -0.45
SS18-207ENST00000577636 ZNF112Q9UJU3 913 aa12.25□□□□□ -0.45
SS18-207ENST00000577636 FBXO3Q9UK99 471 aa12.25□□□□□ -0.45
SS18-207ENST00000577636 DAGLAQ9Y4D2 1042 aa12.25□□□□□ -0.45
SS18-207ENST00000577636 ZHX2Q9Y6X8 837 aa12.25□□□□□ -0.45
SS18-207ENST00000577636 TRIOBPQ9H2D6 2365 aa12.25□□□□□ -0.45
SS18-207ENST00000577636 CXCL11O14625 94 aa12.24□□□□□ -0.45
SS18-207ENST00000577636 TNPO2O14787 897 aaKnown RBP12.24□□□□□ -0.45
SS18-207ENST00000577636 REC8O95072 547 aa12.24□□□□□ -0.45
SS18-207ENST00000577636 INHAP05111 366 aa12.24□□□□□ -0.45
SS18-207ENST00000577636 BCRP11274 1271 aa12.24□□□□□ -0.45
SS18-207ENST00000577636 PRDX5P30044 214 aa12.24□□□□□ -0.45
SS18-207ENST00000577636 BECN1Q14457 450 aa12.24□□□□□ -0.45
SS18-207ENST00000577636 UBE2Q1Q7Z7E8 422 aa12.24□□□□□ -0.45
SS18-207ENST00000577636 ARAP2Q8WZ64 1704 aa12.24□□□□□ -0.45
SS18-207ENST00000577636 RILPL2Q969X0 211 aa12.24□□□□□ -0.45
SS18-207ENST00000577636 LRCH3Q96II8 777 aa12.24□□□□□ -0.45
SS18-207ENST00000577636 ADGRA2Q96PE1 1338 aa12.24□□□□□ -0.45
SS18-207ENST00000577636 DEFB118Q96PH6 123 aa12.24□□□□□ -0.45
SS18-207ENST00000577636 SALL3Q9BXA9 1300 aa12.24□□□□□ -0.45
SS18-207ENST00000577636 C22orf23Q9BZE7 217 aa12.24□□□□□ -0.45
SS18-207ENST00000577636 FAM198AQ9UFP1 575 aa12.24□□□□□ -0.45
SS18-207ENST00000577636 CIAO1O76071 339 aa12.23□□□□□ -0.45
SS18-207ENST00000577636 SEC24BO95487 1268 aa12.23□□□□□ -0.45
SS18-207ENST00000577636 LDHBP07195 334 aaKnown RBP12.23□□□□□ -0.45
SS18-207ENST00000577636 SLURP2P0DP57 97 aa12.23□□□□□ -0.45
SS18-207ENST00000577636 FGFR2P21802 821 aa12.23□□□□□ -0.45
SS18-207ENST00000577636 RFX5P48382 616 aaPredicted RBP12.23□□□□□ -0.45
SS18-207ENST00000577636 NOL9Q5SY16 702 aaKnown RBP12.23□□□□□ -0.45
SS18-207ENST00000577636 FASTKD5Q7L8L6 764 aaKnown RBP12.23□□□□□ -0.45
SS18-207ENST00000577636 SMCR8Q8TEV9 937 aaPredicted RBP12.23□□□□□ -0.45
SS18-207ENST00000577636 LPIN2Q92539 896 aa12.23□□□□□ -0.45
SS18-207ENST00000577636 TBC1D32Q96NH3 1257 aa12.23□□□□□ -0.45
SS18-207ENST00000577636 RPAP1Q9BWH6 1393 aaPredicted RBP12.22□□□□□ -0.45
SS18-207ENST00000577636 SZT2Q5T011 3432 aa12.22□□□□□ -0.45
SS18-207ENST00000577636 AK9Q5TCS8 1911 aa12.22□□□□□ -0.45
SS18-207ENST00000577636 EYA2O00167 538 aa12.22□□□□□ -0.45
SS18-207ENST00000577636 SOX1O00570 391 aaPredicted RBP12.22□□□□□ -0.45
SS18-207ENST00000577636 PTPRAP18433 802 aa12.22□□□□□ -0.45
SS18-207ENST00000577636 SCYL3Q8IZE3 742 aa12.22□□□□□ -0.45
SS18-207ENST00000577636 PAWRQ96IZ0 340 aaKnown RBP12.22□□□□□ -0.45
SS18-207ENST00000577636 PRO3102Q9H379 93 aa12.22□□□□□ -0.45
SS18-207ENST00000577636 AKAP2Q9Y2D5 859 aa12.22□□□□□ -0.45
SS18-207ENST00000577636 TRIM75PA6NK02 468 aa12.21□□□□□ -0.45
SS18-207ENST00000577636 TFCP2Q12800 502 aa12.21□□□□□ -0.45
SS18-207ENST00000577636 TNNI3KQ59H18 835 aa12.21□□□□□ -0.45
SS18-207ENST00000577636 TSHZ3Q63HK5 1081 aa12.21□□□□□ -0.45
SS18-207ENST00000577636 CCDC84Q86UT8 332 aaPredicted RBP12.21□□□□□ -0.45
SS18-207ENST00000577636 ANKRD13CQ8N6S4 541 aa12.21□□□□□ -0.45
SS18-207ENST00000577636 GPR108Q9NPR9 543 aa12.21□□□□□ -0.45
SS18-207ENST00000577636 GNL3LQ9NVN8 582 aaKnown RBP12.21□□□□□ -0.45
SS18-207ENST00000577636 CEP126Q9P2H0 1117 aa12.21□□□□□ -0.45
SS18-207ENST00000577636 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.21□□□□□ -0.45
SS18-207ENST00000577636 AFG3L2Q9Y4W6 797 aa12.21□□□□□ -0.45
SS18-207ENST00000577636 FPGT-TNNI3KV9GXZ4 949 aa12.21□□□□□ -0.45
SS18-207ENST00000577636 A0A0G2JLL6 359 aaPredicted RBP12.2□□□□□ -0.46
SS18-207ENST00000577636 PHF20L1A8MW92 1017 aa12.2□□□□□ -0.46
SS18-207ENST00000577636 HIP1O00291 1037 aa12.2□□□□□ -0.46
SS18-207ENST00000577636 PICALMQ13492 652 aa12.2□□□□□ -0.46
SS18-207ENST00000577636 PRRT2Q7Z6L0 340 aaPredicted RBP12.2□□□□□ -0.46
SS18-207ENST00000577636 C7orf61Q8IZ16 206 aa12.2□□□□□ -0.46
SS18-207ENST00000577636 DIS3LQ8TF46 1054 aaKnown RBP12.2□□□□□ -0.46
SS18-207ENST00000577636 RUFY2Q8WXA3 655 aa12.2□□□□□ -0.46
SS18-207ENST00000577636 COA7Q96BR5 231 aa12.2□□□□□ -0.46
SS18-207ENST00000577636 EAF2Q96CJ1 260 aaPredicted RBP12.2□□□□□ -0.46
SS18-207ENST00000577636 CCDC8Q9H0W5 538 aaPredicted RBP12.2□□□□□ -0.46
SS18-207ENST00000577636 ZMYND8Q9ULU4 1186 aaPredicted RBP12.2□□□□□ -0.46
SS18-207ENST00000577636 CEP290O15078 2479 aa12.19□□□□□ -0.46
SS18-207ENST00000577636 DDTLA6NHG4 134 aaPredicted RBP12.19□□□□□ -0.46
SS18-207ENST00000577636 MCCP23508 829 aa12.19□□□□□ -0.46
SS18-207ENST00000577636 ATP2B3Q16720 1220 aa12.19□□□□□ -0.46
SS18-207ENST00000577636 GORABQ5T7V8 394 aa12.19□□□□□ -0.46
SS18-207ENST00000577636 SH3BP5LQ7L8J4 393 aa12.19□□□□□ -0.46
SS18-207ENST00000577636 NECAB2Q7Z6G3 386 aa12.19□□□□□ -0.46
SS18-207ENST00000577636 PI4K2BQ8TCG2 481 aa12.19□□□□□ -0.46
SS18-207ENST00000577636 PXYLP1Q8TE99 480 aa12.19□□□□□ -0.46
SS18-207ENST00000577636 EVI5LQ96CN4 794 aa12.19□□□□□ -0.46
SS18-207ENST00000577636 NEUROD6Q96NK8 337 aa12.19□□□□□ -0.46
SS18-207ENST00000577636 DIAPH3Q9NSV4 1193 aa12.19□□□□□ -0.46
SS18-207ENST00000577636 ABCF2Q9UG63 623 aa12.19□□□□□ -0.46
SS18-207ENST00000577636 DENND2AQ9ULE3 1009 aa12.19□□□□□ -0.46
SS18-207ENST00000577636 SYN1P17600 705 aa12.18□□□□□ -0.46
SS18-207ENST00000577636 PHKA1P46020 1223 aa12.18□□□□□ -0.46
SS18-207ENST00000577636 RBM25P49756 843 aaKnown RBP12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms