RNA–Protein interactions for RNA: ENST00000577335.1

SCO1-202, Transcript of SCO1, cytochrome c oxidase assembly protein, humanhuman

TSL 3

Gene SCO1, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCO1-202ENST00000577335 OPTNQ96CV9 577 aa23.54■■□□□ 1.36
SCO1-202ENST00000577335 STRBPQ96SI9 672 aaKnown RBP23.54■■□□□ 1.36
SCO1-202ENST00000577335 DCP1AQ9NPI6 582 aaPredicted RBP23.54■■□□□ 1.36
SCO1-202ENST00000577335 SAP30BPQ9UHR5 308 aaKnown RBP23.54■■□□□ 1.36
SCO1-202ENST00000577335 PDE4AP27815 886 aa23.53■■□□□ 1.36
SCO1-202ENST00000577335 PPATQ06203 517 aa23.53■■□□□ 1.36
SCO1-202ENST00000577335 ZMYM1Q5SVZ6 1142 aa23.53■■□□□ 1.36
SCO1-202ENST00000577335 CRACR2BQ8N4Y2 399 aaPredicted RBP23.53■■□□□ 1.36
SCO1-202ENST00000577335 ZIC5Q96T25 663 aa23.53■■□□□ 1.36
SCO1-202ENST00000577335 TRIM34Q9BYJ4 488 aa23.53■■□□□ 1.36
SCO1-202ENST00000577335 TRIM6-TRIM34B2RNG4 842 aa23.52■■□□□ 1.36
SCO1-202ENST00000577335 HSPA1AP0DMV8 641 aaKnown RBP23.52■■□□□ 1.36
SCO1-202ENST00000577335 HSPA1BP0DMV9 641 aaKnown RBP23.52■■□□□ 1.36
SCO1-202ENST00000577335 TM4SF4P48230 202 aa23.52■■□□□ 1.36
SCO1-202ENST00000577335 GIMAP6Q6P9H5 292 aa23.52■■□□□ 1.36
SCO1-202ENST00000577335 SCYL3Q8IZE3 742 aa23.52■■□□□ 1.36
SCO1-202ENST00000577335 SDR42E1Q8WUS8 393 aa23.52■■□□□ 1.36
SCO1-202ENST00000577335 MCM9Q9NXL9 1143 aa23.52■■□□□ 1.36
SCO1-202ENST00000577335 SLC4A4Q9Y6R1 1079 aa23.52■■□□□ 1.36
SCO1-202ENST00000577335 POLR3DP05423 398 aaPredicted RBP23.51■■□□□ 1.35
SCO1-202ENST00000577335 AMOTL1Q8IY63 956 aa23.51■■□□□ 1.35
SCO1-202ENST00000577335 CCDC136Q96JN2 1154 aa23.51■■□□□ 1.35
SCO1-202ENST00000577335 PICK1Q9NRD5 415 aa23.51■■□□□ 1.35
SCO1-202ENST00000577335 GINM1Q9NU53 330 aa23.51■■□□□ 1.35
SCO1-202ENST00000577335 SERPINB13Q9UIV8 391 aa23.51■■□□□ 1.35
SCO1-202ENST00000577335 FOCADQ5VW36 1801 aa23.51■■□□□ 1.35
SCO1-202ENST00000577335 GPAA1O43292 621 aa23.5■■□□□ 1.35
SCO1-202ENST00000577335 PRKAB2O43741 272 aa23.5■■□□□ 1.35
SCO1-202ENST00000577335 PPIL2Q13356 520 aa23.5■■□□□ 1.35
SCO1-202ENST00000577335 RILPL2Q969X0 211 aa23.5■■□□□ 1.35
SCO1-202ENST00000577335 OTUD5Q96G74 571 aa23.5■■□□□ 1.35
SCO1-202ENST00000577335 HELLSQ9NRZ9 838 aa23.5■■□□□ 1.35
SCO1-202ENST00000577335 SAGE1Q9NXZ1 904 aa23.5■■□□□ 1.35
SCO1-202ENST00000577335 MYH7P12883 1935 aa23.5■■□□□ 1.35
SCO1-202ENST00000577335 AK9Q5TCS8 1911 aa23.5■■□□□ 1.35
SCO1-202ENST00000577335 GJA5P36382 358 aa23.49■■□□□ 1.35
SCO1-202ENST00000577335 CAP2P40123 477 aa23.49■■□□□ 1.35
SCO1-202ENST00000577335 GTF2A2P52657 109 aa23.49■■□□□ 1.35
SCO1-202ENST00000577335 MKRN3Q13064 507 aaKnown RBP23.49■■□□□ 1.35
SCO1-202ENST00000577335 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.49■■□□□ 1.35
SCO1-202ENST00000577335 TESPA1A2RU30 521 aaPredicted RBP23.48■■□□□ 1.35
SCO1-202ENST00000577335 FAM196BA6NMK8 535 aa23.48■■□□□ 1.35
SCO1-202ENST00000577335 HIP1O00291 1037 aa23.48■■□□□ 1.35
SCO1-202ENST00000577335 TBC1D2Q9BYX2 928 aa23.48■■□□□ 1.35
SCO1-202ENST00000577335 DNAJC18Q9H819 358 aa23.48■■□□□ 1.35
SCO1-202ENST00000577335 OTOFQ9HC10 1997 aa23.48■■□□□ 1.35
SCO1-202ENST00000577335 CDK5RAP2Q96SN8 1893 aa23.47■■□□□ 1.35
SCO1-202ENST00000577335 GSG1L2A8MUP6 293 aa23.47■■□□□ 1.35
SCO1-202ENST00000577335 M0R2C6 588 aa23.47■■□□□ 1.35
SCO1-202ENST00000577335 ALDH1A1P00352 501 aa23.47■■□□□ 1.35
SCO1-202ENST00000577335 PTPRAP18433 802 aa23.47■■□□□ 1.35
SCO1-202ENST00000577335 PLCD1P51178 756 aa23.47■■□□□ 1.35
SCO1-202ENST00000577335 SNAPC2Q13487 334 aa23.47■■□□□ 1.35
SCO1-202ENST00000577335 TTC22Q5TAA0 569 aa23.47■■□□□ 1.35
SCO1-202ENST00000577335 TATDN1Q6P1N9 297 aa23.47■■□□□ 1.35
SCO1-202ENST00000577335 CNKSR2Q8WXI2 1034 aa23.47■■□□□ 1.35
SCO1-202ENST00000577335 ARPP21Q9UBL0 812 aaPredicted RBP23.47■■□□□ 1.35
SCO1-202ENST00000577335 PATL2C9JE40 543 aaKnown RBP23.46■■□□□ 1.35
SCO1-202ENST00000577335 IRF6O14896 467 aa23.46■■□□□ 1.35
SCO1-202ENST00000577335 SLURP2P0DP57 97 aa23.46■■□□□ 1.35
SCO1-202ENST00000577335 CTCFP49711 727 aaPredicted RBP23.46■■□□□ 1.35
SCO1-202ENST00000577335 GABPAQ06546 454 aa23.46■■□□□ 1.35
SCO1-202ENST00000577335 OTUD7BQ6GQQ9 843 aa23.46■■□□□ 1.35
SCO1-202ENST00000577335 MS4A4AQ96JQ5 239 aa23.46■■□□□ 1.35
SCO1-202ENST00000577335 NACAP1Q9BZK3 213 aa23.46■■□□□ 1.35
SCO1-202ENST00000577335 SWAP70Q9UH65 585 aa23.46■■□□□ 1.35
SCO1-202ENST00000577335 KCNH4Q9UQ05 1017 aa23.46■■□□□ 1.35
SCO1-202ENST00000577335 USP17L12C9JPN9 530 aa23.45■■□□□ 1.34
SCO1-202ENST00000577335 USP17L21D6R901 530 aa23.45■■□□□ 1.34
SCO1-202ENST00000577335 CXCL11O14625 94 aa23.45■■□□□ 1.34
SCO1-202ENST00000577335 ASNSP08243 561 aa23.45■■□□□ 1.34
SCO1-202ENST00000577335 CETPP11597 493 aa23.45■■□□□ 1.34
SCO1-202ENST00000577335 SDSP20132 328 aa23.45■■□□□ 1.34
SCO1-202ENST00000577335 MCMDC2Q4G0Z9 681 aa23.45■■□□□ 1.34
SCO1-202ENST00000577335 SBK1Q52WX2 424 aa23.45■■□□□ 1.34
SCO1-202ENST00000577335 C12orf60Q5U649 245 aa23.45■■□□□ 1.34
SCO1-202ENST00000577335 SEC62Q99442 399 aaKnown RBP23.45■■□□□ 1.34
SCO1-202ENST00000577335 FOXN1O15353 648 aa23.44■■□□□ 1.34
SCO1-202ENST00000577335 SLC4A8Q2Y0W8 1093 aa23.44■■□□□ 1.34
SCO1-202ENST00000577335 RNF186Q9NXI6 227 aa23.44■■□□□ 1.34
SCO1-202ENST00000577335 ZHX2Q9Y6X8 837 aa23.44■■□□□ 1.34
SCO1-202ENST00000577335 DDX60LQ5H9U9 1706 aaKnown RBP23.44■■□□□ 1.34
SCO1-202ENST00000577335 APPP05067 770 aa23.43■■□□□ 1.34
SCO1-202ENST00000577335 MFAP1P55081 439 aaKnown RBP23.43■■□□□ 1.34
SCO1-202ENST00000577335 CTR9Q6PD62 1173 aa23.43■■□□□ 1.34
SCO1-202ENST00000577335 IFNL1Q8IU54 200 aa23.43■■□□□ 1.34
SCO1-202ENST00000577335 AFG3L2Q9Y4W6 797 aa23.43■■□□□ 1.34
SCO1-202ENST00000577335 CCL15-CCL14A0A0B4J2E2 113 aa23.42■■□□□ 1.34
SCO1-202ENST00000577335 USP17L5A8MUK1 530 aa23.42■■□□□ 1.34
SCO1-202ENST00000577335 GSPT1P15170 499 aaKnown RBP23.42■■□□□ 1.34
SCO1-202ENST00000577335 RRP1BQ14684 758 aaKnown RBP23.42■■□□□ 1.34
SCO1-202ENST00000577335 CCL15Q16663 113 aa23.42■■□□□ 1.34
SCO1-202ENST00000577335 CFHR5Q9BXR6 569 aa23.42■■□□□ 1.34
SCO1-202ENST00000577335 AS3MTQ9HBK9 375 aa23.42■■□□□ 1.34
SCO1-202ENST00000577335 ZCCHC17Q9NP64 241 aaKnown RBP23.42■■□□□ 1.34
SCO1-202ENST00000577335 DIAPH3Q9NSV4 1193 aa23.42■■□□□ 1.34
SCO1-202ENST00000577335 MYH1P12882 1939 aa23.41■■□□□ 1.34
SCO1-202ENST00000577335 SIPA1L1O43166 1804 aa23.41■■□□□ 1.34
SCO1-202ENST00000577335 CYP2D6P10635 497 aa23.41■■□□□ 1.34
SCO1-202ENST00000577335 SHMT1P34896 483 aa23.41■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms