RNA–Protein interactions for RNA: ENST00000577198.5

KRT18P55-201, Transcript of keratin 18 pseudogene 55, humanhuman

TSL 1 (best) BASIC

Gene KRT18P55, Length 1,950 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT18P55-201ENST00000577198 NPR1P16066 1061 aa24.79■■□□□ 1.56
KRT18P55-201ENST00000577198 CPLX2Q6PUV4 134 aaKnown RBP24.79■■□□□ 1.56
KRT18P55-201ENST00000577198 NBPF11Q86T75 865 aa24.79■■□□□ 1.56
KRT18P55-201ENST00000577198 MROH7-TTC4A0A0A0MT08 1334 aa24.79■■□□□ 1.56
KRT18P55-201ENST00000577198 C6orf229H3BNL8 230 aa24.78■■□□□ 1.56
KRT18P55-201ENST00000577198 RCAN1P53805 252 aa24.78■■□□□ 1.56
KRT18P55-201ENST00000577198 RTN1Q16799 776 aa24.78■■□□□ 1.56
KRT18P55-201ENST00000577198 SYNE3Q6ZMZ3 975 aa24.78■■□□□ 1.56
KRT18P55-201ENST00000577198 LETM1O95202 739 aaPredicted RBP24.78■■□□□ 1.56
KRT18P55-201ENST00000577198 FMNL1O95466 1100 aaPredicted RBP24.78■■□□□ 1.56
KRT18P55-201ENST00000577198 POLR3DP05423 398 aaPredicted RBP24.78■■□□□ 1.56
KRT18P55-201ENST00000577198 GSTO1P78417 241 aa24.78■■□□□ 1.56
KRT18P55-201ENST00000577198 ZNF396Q96N95 335 aaPredicted RBP24.78■■□□□ 1.56
KRT18P55-201ENST00000577198 NAV1Q8NEY1 1877 aa24.77■■□□□ 1.56
KRT18P55-201ENST00000577198 GUCY1A2P33402 732 aa24.77■■□□□ 1.56
KRT18P55-201ENST00000577198 KRT40Q6A162 431 aa24.77■■□□□ 1.56
KRT18P55-201ENST00000577198 FANCBQ8NB91 859 aa24.77■■□□□ 1.56
KRT18P55-201ENST00000577198 ANO8Q9HCE9 1232 aaPredicted RBP24.77■■□□□ 1.56
KRT18P55-201ENST00000577198 MCM9Q9NXL9 1143 aa24.77■■□□□ 1.56
KRT18P55-201ENST00000577198 PARP3Q9Y6F1 533 aa24.77■■□□□ 1.56
KRT18P55-201ENST00000577198 CMTR1Q8N1G2 835 aaKnown RBP24.76■■□□□ 1.55
KRT18P55-201ENST00000577198 SLC26A6Q9BXS9 759 aa24.76■■□□□ 1.55
KRT18P55-201ENST00000577198 DACT1Q9NYF0 836 aa24.76■■□□□ 1.55
KRT18P55-201ENST00000577198 GOLGA6L4A6NEF3 574 aa24.76■■□□□ 1.55
KRT18P55-201ENST00000577198 NR1I2O75469 434 aa24.76■■□□□ 1.55
KRT18P55-201ENST00000577198 C12orf60Q5U649 245 aa24.76■■□□□ 1.55
KRT18P55-201ENST00000577198 MYSM1Q5VVJ2 828 aa24.76■■□□□ 1.55
KRT18P55-201ENST00000577198 RNF214Q8ND24 703 aa24.76■■□□□ 1.55
KRT18P55-201ENST00000577198 RTEL1Q9NZ71 1219 aa24.76■■□□□ 1.55
KRT18P55-201ENST00000577198 FAM205AQ6ZU69 1335 aa24.76■■□□□ 1.55
KRT18P55-201ENST00000577198 PDE6BP35913 854 aa24.75■■□□□ 1.55
KRT18P55-201ENST00000577198 SSRP1Q08945 709 aaKnown RBP24.75■■□□□ 1.55
KRT18P55-201ENST00000577198 SLC4A8Q2Y0W8 1093 aa24.75■■□□□ 1.55
KRT18P55-201ENST00000577198 MFSD14BQ5SR56 506 aa24.75■■□□□ 1.55
KRT18P55-201ENST00000577198 BRAPQ7Z569 592 aa24.75■■□□□ 1.55
KRT18P55-201ENST00000577198 DDX60LQ5H9U9 1706 aaKnown RBP24.75■■□□□ 1.55
KRT18P55-201ENST00000577198 NMT2O60551 498 aa24.74■■□□□ 1.55
KRT18P55-201ENST00000577198 FAM47AQ5JRC9 791 aa24.74■■□□□ 1.55
KRT18P55-201ENST00000577198 CRACR2BQ8N4Y2 399 aaPredicted RBP24.74■■□□□ 1.55
KRT18P55-201ENST00000577198 NUP133Q8WUM0 1156 aa24.74■■□□□ 1.55
KRT18P55-201ENST00000577198 PPP1R9BQ96SB3 815 aa24.74■■□□□ 1.55
KRT18P55-201ENST00000577198 CLIC4Q9Y696 253 aa24.74■■□□□ 1.55
KRT18P55-201ENST00000577198 MYH6P13533 1939 aa24.74■■□□□ 1.55
KRT18P55-201ENST00000577198 GPR75-ASB3A0A0A6YYF3 556 aa24.74■■□□□ 1.55
KRT18P55-201ENST00000577198 RIMBP2O15034 1052 aa24.74■■□□□ 1.55
KRT18P55-201ENST00000577198 BAG3O95817 575 aa24.73■■□□□ 1.55
KRT18P55-201ENST00000577198 LDHCP07864 332 aa24.73■■□□□ 1.55
KRT18P55-201ENST00000577198 USP5P45974 858 aa24.73■■□□□ 1.55
KRT18P55-201ENST00000577198 TROAPQ12815 778 aa24.73■■□□□ 1.55
KRT18P55-201ENST00000577198 IFIT1BQ5T764 474 aaKnown RBP24.73■■□□□ 1.55
KRT18P55-201ENST00000577198 IQCA1Q86XH1 822 aa24.73■■□□□ 1.55
KRT18P55-201ENST00000577198 LINC00301Q8NCQ3 95 aa24.73■■□□□ 1.55
KRT18P55-201ENST00000577198 TGFBRAP1Q8WUH2 860 aa24.73■■□□□ 1.55
KRT18P55-201ENST00000577198 MASTLQ96GX5 879 aa24.73■■□□□ 1.55
KRT18P55-201ENST00000577198 ALDH1B1P30837 517 aa24.73■■□□□ 1.55
KRT18P55-201ENST00000577198 BTDP43251 543 aa24.73■■□□□ 1.55
KRT18P55-201ENST00000577198 EZH2Q15910 746 aaKnown RBP24.73■■□□□ 1.55
KRT18P55-201ENST00000577198 KLHL34Q8N239 644 aa24.73■■□□□ 1.55
KRT18P55-201ENST00000577198 CCDC82Q8N4S0 544 aa24.73■■□□□ 1.55
KRT18P55-201ENST00000577198 BICD2Q8TD16 824 aa24.73■■□□□ 1.55
KRT18P55-201ENST00000577198 FAM163AQ96GL9 167 aaPredicted RBP24.73■■□□□ 1.55
KRT18P55-201ENST00000577198 CAMKK2Q96RR4 588 aa24.73■■□□□ 1.55
KRT18P55-201ENST00000577198 GOLPH3LQ9H4A5 285 aa24.73■■□□□ 1.55
KRT18P55-201ENST00000577198 ROBO3Q96MS0 1386 aa24.72■■□□□ 1.55
KRT18P55-201ENST00000577198 FUT2Q10981 343 aa24.72■■□□□ 1.55
KRT18P55-201ENST00000577198 CAMK4Q16566 473 aa24.72■■□□□ 1.55
KRT18P55-201ENST00000577198 DYNLL2Q96FJ2 89 aa24.72■■□□□ 1.55
KRT18P55-201ENST00000577198 NUP62CLQ9H1M0 184 aa24.72■■□□□ 1.55
KRT18P55-201ENST00000577198 POLR3EQ9NVU0 708 aa24.72■■□□□ 1.55
KRT18P55-201ENST00000577198 GOLGB1Q14789 3259 aaKnown RBP24.72■■□□□ 1.55
KRT18P55-201ENST00000577198 GTF2IP78347 998 aa24.71■■□□□ 1.55
KRT18P55-201ENST00000577198 MPNDQ8N594 471 aa24.71■■□□□ 1.55
KRT18P55-201ENST00000577198 TBC1D22AQ8WUA7 517 aa24.71■■□□□ 1.55
KRT18P55-201ENST00000577198 COA1Q9GZY4 146 aa24.71■■□□□ 1.55
KRT18P55-201ENST00000577198 DDX19AQ9NUU7 478 aaKnown RBP24.71■■□□□ 1.55
KRT18P55-201ENST00000577198 GAKO14976 1311 aa24.71■■□□□ 1.55
KRT18P55-201ENST00000577198 CCDC196A0A1B0GTZ2 297 aa24.71■■□□□ 1.55
KRT18P55-201ENST00000577198 SLC3A2P08195 630 aaKnown RBP24.71■■□□□ 1.55
KRT18P55-201ENST00000577198 U2AF2P26368 475 aaKnown RBP eCLIP24.71■■□□□ 1.55
KRT18P55-201ENST00000577198 RHBDL3P58872 404 aa24.71■■□□□ 1.55
KRT18P55-201ENST00000577198 PDE4BQ07343 736 aa24.71■■□□□ 1.55
KRT18P55-201ENST00000577198 RBM43Q6ZSC3 357 aaKnown RBP24.71■■□□□ 1.55
KRT18P55-201ENST00000577198 CLSTN2Q9H4D0 955 aa24.71■■□□□ 1.55
KRT18P55-201ENST00000577198 PCDHA7Q9UN72 937 aa24.71■■□□□ 1.55
KRT18P55-201ENST00000577198 PLCD1P51178 756 aa24.7■■□□□ 1.54
KRT18P55-201ENST00000577198 EN1Q05925 392 aaPredicted RBP24.7■■□□□ 1.54
KRT18P55-201ENST00000577198 CCDC173Q0VFZ6 552 aa24.7■■□□□ 1.54
KRT18P55-201ENST00000577198 RCSD1Q6JBY9 416 aa24.7■■□□□ 1.54
KRT18P55-201ENST00000577198 MAPKAPK5Q8IW41 473 aa24.7■■□□□ 1.54
KRT18P55-201ENST00000577198 TAOK2Q9UL54 1235 aa24.7■■□□□ 1.54
KRT18P55-201ENST00000577198 FOCADQ5VW36 1801 aa24.7■■□□□ 1.54
KRT18P55-201ENST00000577198 SLC15A2Q16348 729 aa24.69■■□□□ 1.54
KRT18P55-201ENST00000577198 CCAR1Q8IX12 1150 aaKnown RBP24.69■■□□□ 1.54
KRT18P55-201ENST00000577198 CERS5Q8N5B7 392 aa24.69■■□□□ 1.54
KRT18P55-201ENST00000577198 SHISA4Q96DD7 197 aa24.69■■□□□ 1.54
KRT18P55-201ENST00000577198 SLX4Q8IY92 1834 aa24.69■■□□□ 1.54
KRT18P55-201ENST00000577198 QSER1Q2KHR3 1735 aa24.69■■□□□ 1.54
KRT18P55-201ENST00000577198 SNW1Q13573 536 aaKnown RBP24.69■■□□□ 1.54
KRT18P55-201ENST00000577198 PPP2R5BQ15173 497 aa24.69■■□□□ 1.54
KRT18P55-201ENST00000577198 CATIPQ7Z7H3 387 aa24.69■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms