RNA–Protein interactions for RNA: ENST00000576218.5

SMG6-220, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 902 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-220ENST00000576218 DDRGK1Q96HY6 314 aa18.42■□□□□ 0.54
SMG6-220ENST00000576218 ZHX2Q9Y6X8 837 aa18.42■□□□□ 0.54
SMG6-220ENST00000576218 TTC41PQ6P2S7 1318 aa18.42■□□□□ 0.54
SMG6-220ENST00000576218 CASP8AP2Q9UKL3 1982 aa18.41■□□□□ 0.54
SMG6-220ENST00000576218 PHF20L1A8MW92 1017 aa18.41■□□□□ 0.54
SMG6-220ENST00000576218 POLR3DP05423 398 aaPredicted RBP18.41■□□□□ 0.54
SMG6-220ENST00000576218 SLURP2P0DP57 97 aa18.41■□□□□ 0.54
SMG6-220ENST00000576218 ADD2P35612 726 aa18.41■□□□□ 0.54
SMG6-220ENST00000576218 DGKZQ13574 1117 aa18.41■□□□□ 0.54
SMG6-220ENST00000576218 MS4A4AQ96JQ5 239 aa18.41■□□□□ 0.54
SMG6-220ENST00000576218 GPR25O00155 361 aa18.4■□□□□ 0.54
SMG6-220ENST00000576218 GLRX3O76003 335 aaKnown RBP18.4■□□□□ 0.54
SMG6-220ENST00000576218 MBD4O95243 580 aa18.4■□□□□ 0.54
SMG6-220ENST00000576218 PTPRAP18433 802 aa18.4■□□□□ 0.54
SMG6-220ENST00000576218 B4GALNT3Q6L9W6 998 aa18.4■□□□□ 0.54
SMG6-220ENST00000576218 TTC6Q86TZ1 520 aa18.4■□□□□ 0.54
SMG6-220ENST00000576218 FOXP4Q8IVH2 680 aaPredicted RBP18.4■□□□□ 0.54
SMG6-220ENST00000576218 AMOTL1Q8IY63 956 aa18.4■□□□□ 0.54
SMG6-220ENST00000576218 ZNF296Q8WUU4 475 aaPredicted RBP18.4■□□□□ 0.54
SMG6-220ENST00000576218 RIOK1Q9BRS2 568 aaKnown RBP18.4■□□□□ 0.54
SMG6-220ENST00000576218 ARMT1Q9H993 441 aa18.4■□□□□ 0.54
SMG6-220ENST00000576218 ZFYVE28Q9HCC9 887 aa18.4■□□□□ 0.54
SMG6-220ENST00000576218 TESPA1A2RU30 521 aaPredicted RBP18.39■□□□□ 0.53
SMG6-220ENST00000576218 FKTNO75072 461 aa18.39■□□□□ 0.53
SMG6-220ENST00000576218 MAP3K10Q02779 954 aa18.39■□□□□ 0.53
SMG6-220ENST00000576218 CRHR2Q13324 411 aa18.39■□□□□ 0.53
SMG6-220ENST00000576218 UBE3CQ15386 1083 aa18.39■□□□□ 0.53
SMG6-220ENST00000576218 IFFO2Q5TF58 517 aa18.39■□□□□ 0.53
SMG6-220ENST00000576218 LCORLQ8N3X6 602 aa18.39■□□□□ 0.53
SMG6-220ENST00000576218 PTPN18Q99952 460 aa18.39■□□□□ 0.53
SMG6-220ENST00000576218 MCM9Q9NXL9 1143 aa18.39■□□□□ 0.53
SMG6-220ENST00000576218 DOCK1Q14185 1865 aa18.39■□□□□ 0.53
SMG6-220ENST00000576218 FOCADQ5VW36 1801 aa18.38■□□□□ 0.53
SMG6-220ENST00000576218 TCRBV5S4A2TA0A5A2 114 aa18.38■□□□□ 0.53
SMG6-220ENST00000576218 TRIM75PA6NK02 468 aa18.38■□□□□ 0.53
SMG6-220ENST00000576218 GADL1Q6ZQY3 521 aa18.38■□□□□ 0.53
SMG6-220ENST00000576218 FAM43AQ8N2R8 423 aa18.38■□□□□ 0.53
SMG6-220ENST00000576218 KBTBD3Q8NAB2 608 aa18.38■□□□□ 0.53
SMG6-220ENST00000576218 OTUD7AQ8TE49 926 aaPredicted RBP18.38■□□□□ 0.53
SMG6-220ENST00000576218 SDR42E1Q8WUS8 393 aa18.38■□□□□ 0.53
SMG6-220ENST00000576218 FSD1Q9BTV5 496 aa18.38■□□□□ 0.53
SMG6-220ENST00000576218 CFHR5Q9BXR6 569 aa18.38■□□□□ 0.53
SMG6-220ENST00000576218 AS3MTQ9HBK9 375 aa18.38■□□□□ 0.53
SMG6-220ENST00000576218 CDK5RAP2Q96SN8 1893 aa18.37■□□□□ 0.53
SMG6-220ENST00000576218 BTBD19C9JJ37 291 aa18.37■□□□□ 0.53
SMG6-220ENST00000576218 CXCL11O14625 94 aa18.37■□□□□ 0.53
SMG6-220ENST00000576218 CAP2P40123 477 aa18.37■□□□□ 0.53
SMG6-220ENST00000576218 SLFNL1Q499Z3 407 aa18.37■□□□□ 0.53
SMG6-220ENST00000576218 CTU1Q7Z7A3 348 aaKnown RBP18.37■□□□□ 0.53
SMG6-220ENST00000576218 LNPKQ9C0E8 428 aa18.37■□□□□ 0.53
SMG6-220ENST00000576218 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.37■□□□□ 0.53
SMG6-220ENST00000576218 SERPINB13Q9UIV8 391 aa18.37■□□□□ 0.53
SMG6-220ENST00000576218 KCNH4Q9UQ05 1017 aa18.37■□□□□ 0.53
SMG6-220ENST00000576218 LAMB1P07942 1786 aa18.37■□□□□ 0.53
SMG6-220ENST00000576218 GDF11O95390 407 aa18.36■□□□□ 0.53
SMG6-220ENST00000576218 ZFYP08048 801 aaPredicted RBP18.36■□□□□ 0.53
SMG6-220ENST00000576218 MYH1P12882 1939 aa18.36■□□□□ 0.53
SMG6-220ENST00000576218 FASTKD5Q7L8L6 764 aaKnown RBP18.36■□□□□ 0.53
SMG6-220ENST00000576218 CCDC84Q86UT8 332 aaPredicted RBP18.36■□□□□ 0.53
SMG6-220ENST00000576218 NAV1Q8NEY1 1877 aa18.36■□□□□ 0.53
SMG6-220ENST00000576218 MCOLN1Q9GZU1 580 aa18.36■□□□□ 0.53
SMG6-220ENST00000576218 R3HDMLQ9H3Y0 253 aa18.36■□□□□ 0.53
SMG6-220ENST00000576218 SLC4A4Q9Y6R1 1079 aa18.36■□□□□ 0.53
SMG6-220ENST00000576218 USP17L5A8MUK1 530 aa18.35■□□□□ 0.53
SMG6-220ENST00000576218 PDHXO00330 501 aa18.35■□□□□ 0.53
SMG6-220ENST00000576218 RNF113AO15541 343 aaKnown RBP18.35■□□□□ 0.53
SMG6-220ENST00000576218 ASNSP08243 561 aa18.35■□□□□ 0.53
SMG6-220ENST00000576218 NOM1Q5C9Z4 860 aaKnown RBP18.35■□□□□ 0.53
SMG6-220ENST00000576218 ANKRD23Q86SG2 305 aa18.35■□□□□ 0.53
SMG6-220ENST00000576218 TBC1D2Q9BYX2 928 aa18.35■□□□□ 0.53
SMG6-220ENST00000576218 ZCCHC17Q9NP64 241 aaKnown RBP18.35■□□□□ 0.53
SMG6-220ENST00000576218 AFG3L2Q9Y4W6 797 aa18.35■□□□□ 0.53
SMG6-220ENST00000576218 MYH7P12883 1935 aa18.35■□□□□ 0.53
SMG6-220ENST00000576218 PI4K2BQ8TCG2 481 aa18.34■□□□□ 0.53
SMG6-220ENST00000576218 ERO1AQ96HE7 468 aa18.34■□□□□ 0.53
SMG6-220ENST00000576218 PARK7Q99497 189 aaKnown RBP18.34■□□□□ 0.53
SMG6-220ENST00000576218 EHD4Q9H223 541 aa18.34■□□□□ 0.53
SMG6-220ENST00000576218 DCP1AQ9NPI6 582 aaPredicted RBP18.34■□□□□ 0.53
SMG6-220ENST00000576218 ATP8A2Q9NTI2 1148 aa18.34■□□□□ 0.53
SMG6-220ENST00000576218 A0A0G2JLL6 359 aaPredicted RBP18.33■□□□□ 0.52
SMG6-220ENST00000576218 PRKAB2O43741 272 aa18.33■□□□□ 0.52
SMG6-220ENST00000576218 CHGBP05060 677 aa18.33■□□□□ 0.52
SMG6-220ENST00000576218 SP3Q02447 781 aa18.33■□□□□ 0.52
SMG6-220ENST00000576218 SPP2Q13103 211 aa18.33■□□□□ 0.52
SMG6-220ENST00000576218 KIF22Q14807 665 aa18.33■□□□□ 0.52
SMG6-220ENST00000576218 PRRT2Q7Z6L0 340 aaPredicted RBP18.33■□□□□ 0.52
SMG6-220ENST00000576218 ZNF280CQ8ND82 737 aa18.33■□□□□ 0.52
SMG6-220ENST00000576218 APPBP2Q92624 585 aa18.33■□□□□ 0.52
SMG6-220ENST00000576218 ABHD8Q96I13 439 aa18.33■□□□□ 0.52
SMG6-220ENST00000576218 PUS7LQ9H0K6 701 aaKnown RBP18.33■□□□□ 0.52
SMG6-220ENST00000576218 DNAJC18Q9H819 358 aa18.33■□□□□ 0.52
SMG6-220ENST00000576218 CABP5Q9NP86 173 aa18.33■□□□□ 0.52
SMG6-220ENST00000576218 MPHOSPH10O00566 681 aaKnown RBP18.32■□□□□ 0.52
SMG6-220ENST00000576218 IGHDP01880 384 aa18.32■□□□□ 0.52
SMG6-220ENST00000576218 APPP05067 770 aa18.32■□□□□ 0.52
SMG6-220ENST00000576218 ARHGEF6Q15052 776 aa18.32■□□□□ 0.52
SMG6-220ENST00000576218 CERKLQ49MI3 558 aaPredicted RBP18.32■□□□□ 0.52
SMG6-220ENST00000576218 CHD1LQ86WJ1 897 aa18.32■□□□□ 0.52
SMG6-220ENST00000576218 SMC5Q8IY18 1101 aa18.32■□□□□ 0.52
SMG6-220ENST00000576218 FEZ1Q99689 392 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms