RNA–Protein interactions for RNA: ENST00000575483.5

CDC27-217, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-217ENST00000575483 ZHX2Q9Y6X8 837 aa17.21■□□□□ 0.35
CDC27-217ENST00000575483 TBC1D12O60347 775 aa17.2■□□□□ 0.34
CDC27-217ENST00000575483 ECM2O94769 699 aaPredicted RBP17.2■□□□□ 0.34
CDC27-217ENST00000575483 MYCP01106 439 aaPredicted RBP17.2■□□□□ 0.34
CDC27-217ENST00000575483 HABP4Q5JVS0 413 aaKnown RBP17.2■□□□□ 0.34
CDC27-217ENST00000575483 TBC1D9Q6ZT07 1266 aa17.2■□□□□ 0.34
CDC27-217ENST00000575483 SLF2Q8IX21 1173 aa17.2■□□□□ 0.34
CDC27-217ENST00000575483 SPATA5Q8NB90 893 aa17.2■□□□□ 0.34
CDC27-217ENST00000575483 SLC45A1Q9Y2W3 748 aa17.2■□□□□ 0.34
CDC27-217ENST00000575483 CTNND1O60716 968 aaKnown RBP17.19■□□□□ 0.34
CDC27-217ENST00000575483 GNAI2P04899 355 aa17.19■□□□□ 0.34
CDC27-217ENST00000575483 MCAMP43121 646 aa17.19■□□□□ 0.34
CDC27-217ENST00000575483 CLCN6P51797 869 aa17.19■□□□□ 0.34
CDC27-217ENST00000575483 PICALMQ13492 652 aa17.19■□□□□ 0.34
CDC27-217ENST00000575483 SLC4A8Q2Y0W8 1093 aa17.19■□□□□ 0.34
CDC27-217ENST00000575483 ERICH6Q7L0X2 663 aa17.19■□□□□ 0.34
CDC27-217ENST00000575483 UBE2Q1Q7Z7E8 422 aa17.19■□□□□ 0.34
CDC27-217ENST00000575483 CCDC84Q86UT8 332 aaPredicted RBP17.19■□□□□ 0.34
CDC27-217ENST00000575483 PHF12Q96QT6 1004 aa17.19■□□□□ 0.34
CDC27-217ENST00000575483 PICK1Q9NRD5 415 aa17.19■□□□□ 0.34
CDC27-217ENST00000575483 LAMA3Q16787 3333 aa17.19■□□□□ 0.34
CDC27-217ENST00000575483 MYPNQ86TC9 1320 aa17.19■□□□□ 0.34
CDC27-217ENST00000575483 PRKCZQ05513 592 aa17.18■□□□□ 0.34
CDC27-217ENST00000575483 FASTKD5Q7L8L6 764 aaKnown RBP17.18■□□□□ 0.34
CDC27-217ENST00000575483 ZSCAN29Q8IWY8 852 aaPredicted RBP17.18■□□□□ 0.34
CDC27-217ENST00000575483 NEUROD6Q96NK8 337 aa17.18■□□□□ 0.34
CDC27-217ENST00000575483 FAM196BA6NMK8 535 aa17.17■□□□□ 0.34
CDC27-217ENST00000575483 IPO8O15397 1037 aaKnown RBP17.17■□□□□ 0.34
CDC27-217ENST00000575483 FMNL1O95466 1100 aaPredicted RBP17.17■□□□□ 0.34
CDC27-217ENST00000575483 MAP4K4O95819 1239 aaPredicted RBP17.17■□□□□ 0.34
CDC27-217ENST00000575483 GRK4P32298 578 aa17.17■□□□□ 0.34
CDC27-217ENST00000575483 RRP1BQ14684 758 aaKnown RBP17.17■□□□□ 0.34
CDC27-217ENST00000575483 SP7Q8TDD2 431 aaPredicted RBP17.17■□□□□ 0.34
CDC27-217ENST00000575483 CLUAP1Q96AJ1 413 aa17.17■□□□□ 0.34
CDC27-217ENST00000575483 GABRQQ9UN88 632 aa17.17■□□□□ 0.34
CDC27-217ENST00000575483 CHRM1P11229 460 aaPredicted RBP17.16■□□□□ 0.34
CDC27-217ENST00000575483 HOXD10P28358 340 aa17.16■□□□□ 0.34
CDC27-217ENST00000575483 TMEM57Q8N5G2 664 aa17.16■□□□□ 0.34
CDC27-217ENST00000575483 OSBPL5Q9H0X9 879 aaPredicted RBP17.16■□□□□ 0.34
CDC27-217ENST00000575483 PLXNB2O15031 1838 aa17.15■□□□□ 0.34
CDC27-217ENST00000575483 TRIM75PA6NK02 468 aa17.15■□□□□ 0.34
CDC27-217ENST00000575483 FCGRTP55899 365 aa17.15■□□□□ 0.34
CDC27-217ENST00000575483 TREML2Q5T2D2 321 aa17.15■□□□□ 0.34
CDC27-217ENST00000575483 GADL1Q6ZQY3 521 aa17.15■□□□□ 0.34
CDC27-217ENST00000575483 RAET1EQ8TD07 263 aa17.15■□□□□ 0.34
CDC27-217ENST00000575483 SSH3Q8TE77 659 aa17.15■□□□□ 0.34
CDC27-217ENST00000575483 FRAT1Q92837 279 aaPredicted RBP17.15■□□□□ 0.34
CDC27-217ENST00000575483 GPR108Q9NPR9 543 aa17.15■□□□□ 0.34
CDC27-217ENST00000575483 AGTPBP1Q9UPW5 1226 aa17.15■□□□□ 0.34
CDC27-217ENST00000575483 GJB1P08034 283 aa17.14■□□□□ 0.33
CDC27-217ENST00000575483 PYGBP11216 843 aa17.14■□□□□ 0.33
CDC27-217ENST00000575483 CCL5P13501 91 aa17.14■□□□□ 0.33
CDC27-217ENST00000575483 GJA8P48165 433 aa17.14■□□□□ 0.33
CDC27-217ENST00000575483 GSTO1P78417 241 aa17.14■□□□□ 0.33
CDC27-217ENST00000575483 KIF12Q96FN5 646 aa17.14■□□□□ 0.33
CDC27-217ENST00000575483 LDHCP07864 332 aa17.13■□□□□ 0.33
CDC27-217ENST00000575483 UQCRFS1P1P0C7P4 283 aa17.13■□□□□ 0.33
CDC27-217ENST00000575483 FXR1P51114 621 aaKnown RBP eCLIP17.13■□□□□ 0.33
CDC27-217ENST00000575483 G3BP1Q13283 466 aaKnown RBP eCLIP17.13■□□□□ 0.33
CDC27-217ENST00000575483 TNNI3KQ59H18 835 aa17.13■□□□□ 0.33
CDC27-217ENST00000575483 ADGRA1Q86SQ6 560 aa17.13■□□□□ 0.33
CDC27-217ENST00000575483 SLAIN1Q8ND83 568 aa17.13■□□□□ 0.33
CDC27-217ENST00000575483 SH3RF3Q8TEJ3 882 aaPredicted RBP17.13■□□□□ 0.33
CDC27-217ENST00000575483 DBNDD2Q9BQY9 259 aa17.13■□□□□ 0.33
CDC27-217ENST00000575483 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.13■□□□□ 0.331e-6■■□□□ 14.4
CDC27-217ENST00000575483 RAI14Q9P0K7 980 aa17.13■□□□□ 0.33
CDC27-217ENST00000575483 FPGT-TNNI3KV9GXZ4 949 aa17.13■□□□□ 0.33
CDC27-217ENST00000575483 ALPK3Q96L96 1907 aa17.13■□□□□ 0.33
CDC27-217ENST00000575483 H0YGN5 161 aa17.12■□□□□ 0.33
CDC27-217ENST00000575483 CAP2P40123 477 aa17.12■□□□□ 0.33
CDC27-217ENST00000575483 FLT3LGP49771 235 aa17.12■□□□□ 0.33
CDC27-217ENST00000575483 JAG1P78504 1218 aa17.12■□□□□ 0.33
CDC27-217ENST00000575483 IRF5Q13568 498 aa17.12■□□□□ 0.33
CDC27-217ENST00000575483 GORABQ5T7V8 394 aa17.12■□□□□ 0.33
CDC27-217ENST00000575483 ZKSCAN2Q63HK3 967 aa17.12■□□□□ 0.33
CDC27-217ENST00000575483 METTL16Q86W50 562 aaKnown RBP17.12■□□□□ 0.33
CDC27-217ENST00000575483 PROCA1Q8NCQ7 364 aaPredicted RBP17.12■□□□□ 0.33
CDC27-217ENST00000575483 DNAJC18Q9H819 358 aa17.12■□□□□ 0.33
CDC27-217ENST00000575483 COLQQ9Y215 455 aaPredicted RBP17.12■□□□□ 0.33
CDC27-217ENST00000575483 CYP2E1P05181 493 aaPredicted RBP17.11■□□□□ 0.33
CDC27-217ENST00000575483 RLBP1P12271 317 aa17.11■□□□□ 0.33
CDC27-217ENST00000575483 PPP4CP60510 307 aa17.11■□□□□ 0.33
CDC27-217ENST00000575483 ATP8B2P98198 1209 aa17.11■□□□□ 0.33
CDC27-217ENST00000575483 SPP2Q13103 211 aa17.11■□□□□ 0.33
CDC27-217ENST00000575483 TEX11Q8IYF3 940 aa17.11■□□□□ 0.33
CDC27-217ENST00000575483 ZNF280CQ8ND82 737 aa17.11■□□□□ 0.33
CDC27-217ENST00000575483 ZNF512BQ96KM6 892 aaPredicted RBP17.11■□□□□ 0.33
CDC27-217ENST00000575483 UNC93B1Q9H1C4 597 aa17.11■□□□□ 0.33
CDC27-217ENST00000575483 SNRKQ9NRH2 765 aa17.11■□□□□ 0.33
CDC27-217ENST00000575483 HERC5Q9UII4 1024 aaKnown RBP17.11■□□□□ 0.33
CDC27-217ENST00000575483 NOP58Q9Y2X3 529 aaKnown RBP17.11■□□□□ 0.33
CDC27-217ENST00000575483 MYH1P12882 1939 aa17.1■□□□□ 0.33
CDC27-217ENST00000575483 ELNP15502 786 aa17.1■□□□□ 0.33
CDC27-217ENST00000575483 FAM110CQ1W6H9 321 aa17.1■□□□□ 0.33
CDC27-217ENST00000575483 SH3D19Q5HYK7 790 aa17.1■□□□□ 0.33
CDC27-217ENST00000575483 ANKRD13CQ8N6S4 541 aa17.1■□□□□ 0.33
CDC27-217ENST00000575483 NKX2-3Q8TAU0 364 aa17.1■□□□□ 0.33
CDC27-217ENST00000575483 PXYLP1Q8TE99 480 aa17.1■□□□□ 0.33
CDC27-217ENST00000575483 SMCR8Q8TEV9 937 aaPredicted RBP17.1■□□□□ 0.33
CDC27-217ENST00000575483 RNF208Q9H0X6 261 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms