RNA–Protein interactions for RNA: ENST00000575185.1

SPNS3-203, Transcript of sphingolipid transporter 3 (putative), humanhuman

TSL 5

Gene SPNS3, Length 496 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS3-203ENST00000575185 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP25.71■■□□□ 1.71
SPNS3-203ENST00000575185 DLL1O00548 723 aa25.7■■□□□ 1.7
SPNS3-203ENST00000575185 SPP2Q13103 211 aa25.7■■□□□ 1.7
SPNS3-203ENST00000575185 NECAB2Q7Z6G3 386 aa25.7■■□□□ 1.7
SPNS3-203ENST00000575185 SLF2Q8IX21 1173 aa25.7■■□□□ 1.7
SPNS3-203ENST00000575185 C7orf61Q8IZ16 206 aa25.7■■□□□ 1.7
SPNS3-203ENST00000575185 PROCA1Q8NCQ7 364 aaPredicted RBP25.7■■□□□ 1.7
SPNS3-203ENST00000575185 XPO5Q9HAV4 1204 aaKnown RBP eCLIP25.7■■□□□ 1.7
SPNS3-203ENST00000575185 GPR75-ASB3A0A0A6YYF3 556 aa25.69■■□□□ 1.7
SPNS3-203ENST00000575185 A0A1B0GUL7 405 aa25.69■■□□□ 1.7
SPNS3-203ENST00000575185 HMGCS2P54868 508 aa25.69■■□□□ 1.7
SPNS3-203ENST00000575185 RRP1BQ14684 758 aaKnown RBP25.69■■□□□ 1.7
SPNS3-203ENST00000575185 PI16Q6UXB8 463 aa25.69■■□□□ 1.7
SPNS3-203ENST00000575185 CDCA7LQ96GN5 454 aa25.69■■□□□ 1.7
SPNS3-203ENST00000575185 XAGE2Q96GT9 111 aa25.69■■□□□ 1.7
SPNS3-203ENST00000575185 MEIS3Q99687 375 aa25.69■■□□□ 1.7
SPNS3-203ENST00000575185 ZMYND8Q9ULU4 1186 aaPredicted RBP25.69■■□□□ 1.7
SPNS3-203ENST00000575185 TBC1D12O60347 775 aa25.68■■□□□ 1.7
SPNS3-203ENST00000575185 HMGCRP04035 888 aa25.68■■□□□ 1.7
SPNS3-203ENST00000575185 SPTY2D1Q68D10 685 aaPredicted RBP25.68■■□□□ 1.7
SPNS3-203ENST00000575185 CDK5RAP2Q96SN8 1893 aa25.68■■□□□ 1.7
SPNS3-203ENST00000575185 TFCP2Q12800 502 aa25.67■■□□□ 1.7
SPNS3-203ENST00000575185 ERICH6Q7L0X2 663 aa25.67■■□□□ 1.7
SPNS3-203ENST00000575185 ZNF280CQ8ND82 737 aa25.67■■□□□ 1.7
SPNS3-203ENST00000575185 GDF15Q99988 308 aa25.67■■□□□ 1.7
SPNS3-203ENST00000575185 OSBPL5Q9H0X9 879 aaPredicted RBP25.67■■□□□ 1.7
SPNS3-203ENST00000575185 NOB1Q9ULX3 412 aaKnown RBP25.67■■□□□ 1.7
SPNS3-203ENST00000575185 COL2A1P02458 1487 aaPredicted RBP25.66■■□□□ 1.7
SPNS3-203ENST00000575185 CAPN2P17655 700 aa25.66■■□□□ 1.7
SPNS3-203ENST00000575185 MNX1P50219 401 aaPredicted RBP25.66■■□□□ 1.7
SPNS3-203ENST00000575185 ASCC2Q9H1I8 757 aaPredicted RBP25.66■■□□□ 1.7
SPNS3-203ENST00000575185 GJD2Q9UKL4 321 aa25.66■■□□□ 1.7
SPNS3-203ENST00000575185 PEX10O60683 326 aa25.65■■□□□ 1.7
SPNS3-203ENST00000575185 TBC1D9Q6ZT07 1266 aa25.65■■□□□ 1.7
SPNS3-203ENST00000575185 HMG20BQ9P0W2 317 aa25.65■■□□□ 1.7
SPNS3-203ENST00000575185 UNC80Q8N2C7 3258 aa25.65■■□□□ 1.7
SPNS3-203ENST00000575185 MAST2Q6P0Q8 1798 aa25.64■■□□□ 1.7
SPNS3-203ENST00000575185 SYN1P17600 705 aa25.64■■□□□ 1.7
SPNS3-203ENST00000575185 GCLCP48506 637 aaPredicted RBP25.64■■□□□ 1.7
SPNS3-203ENST00000575185 MVPQ14764 893 aaKnown RBP25.64■■□□□ 1.7
SPNS3-203ENST00000575185 ANKLE1Q8NAG6 615 aa25.64■■□□□ 1.7
SPNS3-203ENST00000575185 TRIB2Q92519 343 aa25.64■■□□□ 1.7
SPNS3-203ENST00000575185 NSUN4Q96CB9 384 aaKnown RBP25.64■■□□□ 1.7
SPNS3-203ENST00000575185 RPTORQ8N122 1335 aa25.63■■□□□ 1.69
SPNS3-203ENST00000575185 FOCADQ5VW36 1801 aa25.63■■□□□ 1.69
SPNS3-203ENST00000575185 NPM3O75607 178 aaKnown RBP25.63■■□□□ 1.69
SPNS3-203ENST00000575185 CAP2P40123 477 aa25.63■■□□□ 1.69
SPNS3-203ENST00000575185 HMX1Q9NP08 348 aaPredicted RBP25.63■■□□□ 1.69
SPNS3-203ENST00000575185 NBPF3Q9H094 633 aa25.62■■□□□ 1.69
SPNS3-203ENST00000575185 CUL9Q8IWT3 2517 aa25.62■■□□□ 1.69
SPNS3-203ENST00000575185 DNAH12Q6ZR08 3092 aa25.62■■□□□ 1.69
SPNS3-203ENST00000575185 MYO5AQ9Y4I1 1855 aaKnown RBP25.62■■□□□ 1.69
SPNS3-203ENST00000575185 FRMPD3Q5JV73 1810 aa25.61■■□□□ 1.69
SPNS3-203ENST00000575185 USP17L5A8MUK1 530 aa25.61■■□□□ 1.69
SPNS3-203ENST00000575185 SRGAP3O43295 1099 aa25.61■■□□□ 1.69
SPNS3-203ENST00000575185 BMP8BP34820 402 aa25.61■■□□□ 1.69
SPNS3-203ENST00000575185 PABPC4Q13310 644 aaKnown RBP eCLIP25.61■■□□□ 1.69
SPNS3-203ENST00000575185 SH3D19Q5HYK7 790 aa25.61■■□□□ 1.69
SPNS3-203ENST00000575185 Q7L0L9 218 aa25.61■■□□□ 1.69
SPNS3-203ENST00000575185 SPATA5Q8NB90 893 aa25.61■■□□□ 1.69
SPNS3-203ENST00000575185 NEUROD6Q96NK8 337 aa25.61■■□□□ 1.69
SPNS3-203ENST00000575185 AKAP2Q9Y2D5 859 aa25.61■■□□□ 1.69
SPNS3-203ENST00000575185 LAMA2P24043 3122 aaKnown RBP25.61■■□□□ 1.69
SPNS3-203ENST00000575185 MTMR2Q13614 643 aa25.6■■□□□ 1.69
SPNS3-203ENST00000575185 SHROOM1Q2M3G4 852 aaPredicted RBP25.6■■□□□ 1.69
SPNS3-203ENST00000575185 TEX11Q8IYF3 940 aa25.6■■□□□ 1.69
SPNS3-203ENST00000575185 API5Q9BZZ5 524 aaKnown RBP25.6■■□□□ 1.69
SPNS3-203ENST00000575185 C11orf49Q9H6J7 331 aa25.6■■□□□ 1.69
SPNS3-203ENST00000575185 RAI14Q9P0K7 980 aa25.6■■□□□ 1.69
SPNS3-203ENST00000575185 MORF4L1Q9UBU8 362 aa25.6■■□□□ 1.69
SPNS3-203ENST00000575185 CYP2B6P20813 491 aa25.59■■□□□ 1.69
SPNS3-203ENST00000575185 MAGEA10P43363 369 aaPredicted RBP25.59■■□□□ 1.69
SPNS3-203ENST00000575185 GSTO1P78417 241 aa25.59■■□□□ 1.69
SPNS3-203ENST00000575185 JAG1P78504 1218 aa25.59■■□□□ 1.69
SPNS3-203ENST00000575185 SH3RF3Q8TEJ3 882 aaPredicted RBP25.59■■□□□ 1.69
SPNS3-203ENST00000575185 TBC1D2Q9BYX2 928 aa25.59■■□□□ 1.69
SPNS3-203ENST00000575185 PFASO15067 1338 aa25.59■■□□□ 1.69
SPNS3-203ENST00000575185 DEFB123Q8N688 67 aa25.58■■□□□ 1.69
SPNS3-203ENST00000575185 TXNRD2Q9NNW7 524 aa25.58■■□□□ 1.69
SPNS3-203ENST00000575185 OGDHLQ9ULD0 1010 aa25.58■■□□□ 1.69
SPNS3-203ENST00000575185 HDAC5Q9UQL6 1122 aa25.58■■□□□ 1.69
SPNS3-203ENST00000575185 LDHCP07864 332 aa25.57■■□□□ 1.68
SPNS3-203ENST00000575185 PRKAR2AP13861 404 aaKnown RBP25.57■■□□□ 1.68
SPNS3-203ENST00000575185 ARID4AP29374 1257 aaPredicted RBP25.57■■□□□ 1.68
SPNS3-203ENST00000575185 MCAMP43121 646 aa25.57■■□□□ 1.68
SPNS3-203ENST00000575185 IRX3P78415 501 aaPredicted RBP25.57■■□□□ 1.68
SPNS3-203ENST00000575185 MAP3K21Q5TCX8 1036 aa25.57■■□□□ 1.68
SPNS3-203ENST00000575185 TRMT2AQ8IZ69 625 aaKnown RBP25.57■■□□□ 1.68
SPNS3-203ENST00000575185 AS3MTQ9HBK9 375 aa25.57■■□□□ 1.68
SPNS3-203ENST00000575185 HERC5Q9UII4 1024 aaKnown RBP25.57■■□□□ 1.68
SPNS3-203ENST00000575185 MAP4K4O95819 1239 aaPredicted RBP25.56■■□□□ 1.68
SPNS3-203ENST00000575185 GORABQ5T7V8 394 aa25.56■■□□□ 1.68
SPNS3-203ENST00000575185 P2RX7Q99572 595 aaKnown RBP25.56■■□□□ 1.68
SPNS3-203ENST00000575185 DNAJC18Q9H819 358 aa25.56■■□□□ 1.68
SPNS3-203ENST00000575185 MTX1Q13505 466 aa25.55■■□□□ 1.68
SPNS3-203ENST00000575185 WDR18Q9BV38 432 aa25.55■■□□□ 1.68
SPNS3-203ENST00000575185 BACE1P56817 501 aa25.54■■□□□ 1.68
SPNS3-203ENST00000575185 HERVK_113P62684 666 aa25.54■■□□□ 1.68
SPNS3-203ENST00000575185 TDHQ8IZJ6 230 aa25.54■■□□□ 1.68
SPNS3-203ENST00000575185 AATFQ9NY61 560 aaKnown RBP eCLIP25.54■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms