RNA–Protein interactions for RNA: ENST00000574668.1

TMEM88-202, Transcript of transmembrane protein 88, humanhuman

TSL 2 BASIC

Gene TMEM88, Length 510 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88-202ENST00000574668 SNAPC2Q13487 334 aa20.1■□□□□ 0.81
TMEM88-202ENST00000574668 LRRFIP1Q32MZ4 808 aaKnown RBP20.1■□□□□ 0.81
TMEM88-202ENST00000574668 HABP4Q5JVS0 413 aaKnown RBP20.1■□□□□ 0.81
TMEM88-202ENST00000574668 ZSCAN25Q6NSZ9 544 aa20.1■□□□□ 0.81
TMEM88-202ENST00000574668 FAM163AQ96GL9 167 aaPredicted RBP20.1■□□□□ 0.81
TMEM88-202ENST00000574668 INPP5BP32019 993 aa20.09■□□□□ 0.81
TMEM88-202ENST00000574668 PPIL2Q13356 520 aa20.09■□□□□ 0.81
TMEM88-202ENST00000574668 ARHGEF6Q15052 776 aa20.09■□□□□ 0.81
TMEM88-202ENST00000574668 SLC9C2Q5TAH2 1124 aa20.09■□□□□ 0.81
TMEM88-202ENST00000574668 FKBP1CQ5VVH2 108 aa20.09■□□□□ 0.81
TMEM88-202ENST00000574668 TMED8Q6PL24 325 aaPredicted RBP20.09■□□□□ 0.81
TMEM88-202ENST00000574668 KBTBD3Q8NAB2 608 aa20.09■□□□□ 0.81
TMEM88-202ENST00000574668 SH3TC2Q8TF17 1288 aa20.09■□□□□ 0.81
TMEM88-202ENST00000574668 FSD1Q9BTV5 496 aa20.09■□□□□ 0.81
TMEM88-202ENST00000574668 GAKO14976 1311 aa20.08■□□□□ 0.81
TMEM88-202ENST00000574668 BAG3O95817 575 aa20.08■□□□□ 0.81
TMEM88-202ENST00000574668 PDE6AP16499 860 aa20.08■□□□□ 0.81
TMEM88-202ENST00000574668 BTDP43251 543 aa20.08■□□□□ 0.81
TMEM88-202ENST00000574668 LACTBP83111 547 aaPredicted RBP20.08■□□□□ 0.81
TMEM88-202ENST00000574668 TCP10Q12799 353 aa20.08■□□□□ 0.81
TMEM88-202ENST00000574668 SLC4A8Q2Y0W8 1093 aa20.08■□□□□ 0.81
TMEM88-202ENST00000574668 DCAF15Q66K64 600 aa20.08■□□□□ 0.81
TMEM88-202ENST00000574668 NBPF11Q86T75 865 aa20.08■□□□□ 0.81
TMEM88-202ENST00000574668 RILPL2Q969X0 211 aa20.08■□□□□ 0.81
TMEM88-202ENST00000574668 EVI5LQ96CN4 794 aa20.08■□□□□ 0.81
TMEM88-202ENST00000574668 ZNF341Q9BYN7 854 aa20.08■□□□□ 0.81
TMEM88-202ENST00000574668 RPAP1Q9BWH6 1393 aaPredicted RBP20.08■□□□□ 0.8
TMEM88-202ENST00000574668 RGS3P49796 1198 aa20.07■□□□□ 0.8
TMEM88-202ENST00000574668 NFIAQ12857 509 aa20.07■□□□□ 0.8
TMEM88-202ENST00000574668 CDC42EP5Q6NZY7 148 aa20.07■□□□□ 0.8
TMEM88-202ENST00000574668 ZNF384Q8TF68 577 aa20.07■□□□□ 0.8
TMEM88-202ENST00000574668 HOOK2Q96ED9 719 aa20.07■□□□□ 0.8
TMEM88-202ENST00000574668 USP40Q9NVE5 1235 aa20.07■□□□□ 0.8
TMEM88-202ENST00000574668 CPA4Q9UI42 421 aa20.07■□□□□ 0.8
TMEM88-202ENST00000574668 ZNF532Q9HCE3 1301 aa20.06■□□□□ 0.8
TMEM88-202ENST00000574668 GPR75-ASB3A0A0A6YYF3 556 aa20.06■□□□□ 0.8
TMEM88-202ENST00000574668 WDHD1O75717 1129 aaPredicted RBP20.06■□□□□ 0.8
TMEM88-202ENST00000574668 CTGFP29279 349 aa20.06■□□□□ 0.8
TMEM88-202ENST00000574668 PPATQ06203 517 aa20.06■□□□□ 0.8
TMEM88-202ENST00000574668 FAM151AQ8WW52 585 aa20.06■□□□□ 0.8
TMEM88-202ENST00000574668 ZCCHC17Q9NP64 241 aaKnown RBP20.06■□□□□ 0.8
TMEM88-202ENST00000574668 KIAA0100Q14667 2235 aaKnown RBP20.06■□□□□ 0.8
TMEM88-202ENST00000574668 ZFYP08048 801 aaPredicted RBP20.05■□□□□ 0.8
TMEM88-202ENST00000574668 ADD2P35612 726 aa20.05■□□□□ 0.8
TMEM88-202ENST00000574668 KIF22Q14807 665 aa20.05■□□□□ 0.8
TMEM88-202ENST00000574668 TTC22Q5TAA0 569 aa20.05■□□□□ 0.8
TMEM88-202ENST00000574668 AATFQ9NY61 560 aaKnown RBP eCLIP20.05■□□□□ 0.8
TMEM88-202ENST00000574668 MYH2Q9UKX2 1941 aa20.05■□□□□ 0.8
TMEM88-202ENST00000574668 RNF113AO15541 343 aaKnown RBP20.04■□□□□ 0.8
TMEM88-202ENST00000574668 PLCG2P16885 1265 aa20.04■□□□□ 0.8
TMEM88-202ENST00000574668 UBE3CQ15386 1083 aa20.04■□□□□ 0.8
TMEM88-202ENST00000574668 C17orf99Q6UX52 265 aa20.04■□□□□ 0.8
TMEM88-202ENST00000574668 ZFPM1Q8IX07 1006 aa20.04■□□□□ 0.8
TMEM88-202ENST00000574668 FAM198AQ9UFP1 575 aa20.04■□□□□ 0.8
TMEM88-202ENST00000574668 PDHXO00330 501 aa20.03■□□□□ 0.8
TMEM88-202ENST00000574668 ADGRA1Q86SQ6 560 aa20.03■□□□□ 0.8
TMEM88-202ENST00000574668 SKAP1Q86WV1 359 aa20.03■□□□□ 0.8
TMEM88-202ENST00000574668 CERS3Q8IU89 383 aa20.03■□□□□ 0.8
TMEM88-202ENST00000574668 MIGA1Q8NAN2 632 aa20.03■□□□□ 0.8
TMEM88-202ENST00000574668 ZNF112Q9UJU3 913 aa20.03■□□□□ 0.8
TMEM88-202ENST00000574668 MAST2Q6P0Q8 1798 aa20.03■□□□□ 0.8
TMEM88-202ENST00000574668 MYO5AQ9Y4I1 1855 aaKnown RBP20.03■□□□□ 0.8
TMEM88-202ENST00000574668 DOCK2Q92608 1830 aa20.02■□□□□ 0.8
TMEM88-202ENST00000574668 MAGEB6P1A0A0J9YX57 407 aa20.02■□□□□ 0.8
TMEM88-202ENST00000574668 PPP4CP60510 307 aa20.02■□□□□ 0.8
TMEM88-202ENST00000574668 DYNLL1P63167 89 aaKnown RBP20.02■□□□□ 0.8
TMEM88-202ENST00000574668 MOGSQ13724 837 aa20.02■□□□□ 0.8
TMEM88-202ENST00000574668 ANKRD23Q86SG2 305 aa20.02■□□□□ 0.8
TMEM88-202ENST00000574668 TEX11Q8IYF3 940 aa20.02■□□□□ 0.8
TMEM88-202ENST00000574668 TRIM47Q96LD4 638 aa20.02■□□□□ 0.8
TMEM88-202ENST00000574668 KCNH4Q9UQ05 1017 aa20.02■□□□□ 0.8
TMEM88-202ENST00000574668 ADGRA2Q96PE1 1338 aa20.02■□□□□ 0.79
TMEM88-202ENST00000574668 TCRBV5S4A2TA0A5A2 114 aa20.01■□□□□ 0.79
TMEM88-202ENST00000574668 PSMC4P43686 418 aa20.01■□□□□ 0.79
TMEM88-202ENST00000574668 MTFR1Q15390 333 aa20.01■□□□□ 0.79
TMEM88-202ENST00000574668 GNRH1P01148 92 aa20■□□□□ 0.79
TMEM88-202ENST00000574668 GSPT1P15170 499 aaKnown RBP20■□□□□ 0.79
TMEM88-202ENST00000574668 RHBDL3P58872 404 aa20■□□□□ 0.79
TMEM88-202ENST00000574668 SLFNL1Q499Z3 407 aa20■□□□□ 0.79
TMEM88-202ENST00000574668 TICAM2Q86XR7 235 aa20■□□□□ 0.79
TMEM88-202ENST00000574668 SH3RF3Q8TEJ3 882 aaPredicted RBP20■□□□□ 0.79
TMEM88-202ENST00000574668 APPBP2Q92624 585 aa20■□□□□ 0.79
TMEM88-202ENST00000574668 SRRDQ9UH36 339 aa20■□□□□ 0.79
TMEM88-202ENST00000574668 COLQQ9Y215 455 aaPredicted RBP20■□□□□ 0.79
TMEM88-202ENST00000574668 GTF3C3Q9Y5Q9 886 aa20■□□□□ 0.79
TMEM88-202ENST00000574668 SLURP2P0DP57 97 aa19.99■□□□□ 0.79
TMEM88-202ENST00000574668 OSBPP22059 807 aa19.99■□□□□ 0.79
TMEM88-202ENST00000574668 PICALMQ13492 652 aa19.99■□□□□ 0.79
TMEM88-202ENST00000574668 NOL9Q5SY16 702 aaKnown RBP19.99■□□□□ 0.79
TMEM88-202ENST00000574668 HIP1O00291 1037 aa19.98■□□□□ 0.79
TMEM88-202ENST00000574668 MBD4O95243 580 aa19.98■□□□□ 0.79
TMEM88-202ENST00000574668 FMNL1O95466 1100 aaPredicted RBP19.98■□□□□ 0.79
TMEM88-202ENST00000574668 CHGBP05060 677 aa19.98■□□□□ 0.79
TMEM88-202ENST00000574668 CYP2C8P10632 490 aa19.98■□□□□ 0.79
TMEM88-202ENST00000574668 SDSP20132 328 aa19.98■□□□□ 0.79
TMEM88-202ENST00000574668 USP5P45974 858 aa19.98■□□□□ 0.79
TMEM88-202ENST00000574668 FXR1P51114 621 aaKnown RBP eCLIP19.98■□□□□ 0.79
TMEM88-202ENST00000574668 PRMT2P55345 433 aa19.98■□□□□ 0.79
TMEM88-202ENST00000574668 SHISA4Q96DD7 197 aa19.98■□□□□ 0.79
TMEM88-202ENST00000574668 IDI2Q9BXS1 227 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms