RNA–Protein interactions for RNA: ENST00000574412.5

CXCL16-203, Transcript of C-X-C motif chemokine ligand 16, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CXCL16, Length 1,668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL16-203ENST00000574412 BLOC1S2Q6QNY1 142 aa25.08■■□□□ 1.61
CXCL16-203ENST00000574412 STAG1Q8WVM7 1258 aa25.08■■□□□ 1.61
CXCL16-203ENST00000574412 TMEM39BQ9GZU3 492 aa25.08■■□□□ 1.61
CXCL16-203ENST00000574412 GGA3Q9NZ52 723 aa25.08■■□□□ 1.61
CXCL16-203ENST00000574412 K7ELQ4 463 aaPredicted RBP25.07■■□□□ 1.6
CXCL16-203ENST00000574412 ENTPD3O75355 529 aa25.07■■□□□ 1.6
CXCL16-203ENST00000574412 PSMA5P28066 241 aa25.07■■□□□ 1.6
CXCL16-203ENST00000574412 CHST3Q7LGC8 479 aa25.07■■□□□ 1.6
CXCL16-203ENST00000574412 CDAN1Q8IWY9 1227 aa25.07■■□□□ 1.6
CXCL16-203ENST00000574412 WDR90Q96KV7 1748 aa25.07■■□□□ 1.6
CXCL16-203ENST00000574412 EPHX2P34913 555 aa25.07■■□□□ 1.6
CXCL16-203ENST00000574412 TRDNQ13061 729 aa25.07■■□□□ 1.6
CXCL16-203ENST00000574412 RALYLQ86SE5 291 aaKnown RBP25.07■■□□□ 1.6
CXCL16-203ENST00000574412 TTC6Q86TZ1 520 aa25.07■■□□□ 1.6
CXCL16-203ENST00000574412 NCOA7Q8NI08 942 aa25.07■■□□□ 1.6
CXCL16-203ENST00000574412 TM6SF1Q9BZW5 370 aa25.07■■□□□ 1.6
CXCL16-203ENST00000574412 ZSWIM6Q9HCJ5 1215 aa25.07■■□□□ 1.6
CXCL16-203ENST00000574412 CYP46A1Q9Y6A2 500 aa25.07■■□□□ 1.6
CXCL16-203ENST00000574412 NPM3O75607 178 aaKnown RBP25.06■■□□□ 1.6
CXCL16-203ENST00000574412 HLA-DOAP06340 250 aa25.06■■□□□ 1.6
CXCL16-203ENST00000574412 SLC3A2P08195 630 aaKnown RBP25.06■■□□□ 1.6
CXCL16-203ENST00000574412 RUFY3Q7L099 469 aa25.06■■□□□ 1.6
CXCL16-203ENST00000574412 FAM151AQ8WW52 585 aa25.06■■□□□ 1.6
CXCL16-203ENST00000574412 ROBO3Q96MS0 1386 aa25.06■■□□□ 1.6
CXCL16-203ENST00000574412 FAM196BA6NMK8 535 aa25.05■■□□□ 1.6
CXCL16-203ENST00000574412 POTECB2RU33 542 aa25.05■■□□□ 1.6
CXCL16-203ENST00000574412 RASA3Q14644 834 aa25.05■■□□□ 1.6
CXCL16-203ENST00000574412 FKBP1CQ5VVH2 108 aa25.05■■□□□ 1.6
CXCL16-203ENST00000574412 IL27Q8NEV9 243 aa25.05■■□□□ 1.6
CXCL16-203ENST00000574412 ZNF526Q8TF50 670 aaPredicted RBP25.05■■□□□ 1.6
CXCL16-203ENST00000574412 LRRC2Q9BYS8 371 aa25.05■■□□□ 1.6
CXCL16-203ENST00000574412 RNF41Q9H4P4 317 aaPredicted RBP25.05■■□□□ 1.6
CXCL16-203ENST00000574412 RPS6KB1P23443 525 aa25.04■■□□□ 1.6
CXCL16-203ENST00000574412 NOL8Q76FK4 1167 aaKnown RBP25.04■■□□□ 1.6
CXCL16-203ENST00000574412 CSRNP1Q96S65 589 aa25.04■■□□□ 1.6
CXCL16-203ENST00000574412 KDM4AO75164 1064 aa25.04■■□□□ 1.6
CXCL16-203ENST00000574412 TNNI2P48788 182 aa25.04■■□□□ 1.6
CXCL16-203ENST00000574412 PDE4BQ07343 736 aa25.04■■□□□ 1.6
CXCL16-203ENST00000574412 EAPPQ56P03 285 aaPredicted RBP25.04■■□□□ 1.6
CXCL16-203ENST00000574412 FAM83AQ86UY5 434 aa25.04■■□□□ 1.6
CXCL16-203ENST00000574412 MB21D2Q8IYB1 491 aaPredicted RBP25.04■■□□□ 1.6
CXCL16-203ENST00000574412 DHX36Q9H2U1 1008 aaKnown RBP25.04■■□□□ 1.6
CXCL16-203ENST00000574412 TAF1DQ9H5J8 278 aaPredicted RBP25.04■■□□□ 1.6
CXCL16-203ENST00000574412 DDX52Q9Y2R4 599 aaKnown RBP eCLIP25.04■■□□□ 1.6
CXCL16-203ENST00000574412 ATRNL1Q5VV63 1379 aa25.03■■□□□ 1.6
CXCL16-203ENST00000574412 RANBP6O60518 1105 aaKnown RBP25.03■■□□□ 1.6
CXCL16-203ENST00000574412 TNFAIP1Q13829 316 aa25.03■■□□□ 1.6
CXCL16-203ENST00000574412 C16orf86Q6ZW13 317 aa25.03■■□□□ 1.6
CXCL16-203ENST00000574412 CYB5R4Q7L1T6 521 aa25.03■■□□□ 1.6
CXCL16-203ENST00000574412 CNNM2Q9H8M5 875 aa25.03■■□□□ 1.6
CXCL16-203ENST00000574412 MKNK2Q9HBH9 465 aa25.03■■□□□ 1.6
CXCL16-203ENST00000574412 PDRG1Q9NUG6 133 aa25.03■■□□□ 1.6
CXCL16-203ENST00000574412 SERPINB13Q9UIV8 391 aa25.03■■□□□ 1.6
CXCL16-203ENST00000574412 IQCA1LA6NCM1 817 aa25.02■■□□□ 1.6
CXCL16-203ENST00000574412 CDK8P49336 464 aa25.02■■□□□ 1.6
CXCL16-203ENST00000574412 CRACR2BQ8N4Y2 399 aaPredicted RBP25.02■■□□□ 1.6
CXCL16-203ENST00000574412 LARP6Q9BRS8 491 aaKnown RBP25.02■■□□□ 1.6
CXCL16-203ENST00000574412 KRT23Q9C075 422 aa25.02■■□□□ 1.6
CXCL16-203ENST00000574412 DEFB129Q9H1M3 183 aa25.02■■□□□ 1.6
CXCL16-203ENST00000574412 PI4KBQ9UBF8 816 aa25.02■■□□□ 1.6
CXCL16-203ENST00000574412 COL2A1P02458 1487 aaPredicted RBP25.02■■□□□ 1.6
CXCL16-203ENST00000574412 MCM2P49736 904 aa25.01■■□□□ 1.59
CXCL16-203ENST00000574412 ANTXR2P58335 489 aa25.01■■□□□ 1.59
CXCL16-203ENST00000574412 FAM47AQ5JRC9 791 aa25.01■■□□□ 1.59
CXCL16-203ENST00000574412 DHX32Q7L7V1 743 aaKnown RBP25.01■■□□□ 1.59
CXCL16-203ENST00000574412 TTC14Q96N46 770 aa25.01■■□□□ 1.59
CXCL16-203ENST00000574412 PRC1O43663 620 aa25.01■■□□□ 1.59
CXCL16-203ENST00000574412 HMGB1P09429 215 aaKnown RBP25.01■■□□□ 1.59
CXCL16-203ENST00000574412 GABPAQ06546 454 aa25.01■■□□□ 1.59
CXCL16-203ENST00000574412 PRAMEF18Q5VWM3 479 aa25.01■■□□□ 1.59
CXCL16-203ENST00000574412 USP50Q70EL3 339 aaPredicted RBP25.01■■□□□ 1.59
CXCL16-203ENST00000574412 APOBEC3FQ8IUX4 373 aaKnown RBP25.01■■□□□ 1.59
CXCL16-203ENST00000574412 SPRYD3Q8NCJ5 442 aa25.01■■□□□ 1.59
CXCL16-203ENST00000574412 ZKSCAN3Q9BRR0 538 aa25.01■■□□□ 1.59
CXCL16-203ENST00000574412 DNAJC18Q9H819 358 aa25.01■■□□□ 1.59
CXCL16-203ENST00000574412 RRAGCQ9HB90 399 aa25.01■■□□□ 1.59
CXCL16-203ENST00000574412 ZSWIM5Q9P217 1185 aa25.01■■□□□ 1.59
CXCL16-203ENST00000574412 FGRP09769 529 aa25■■□□□ 1.59
CXCL16-203ENST00000574412 MCM5P33992 734 aa25■■□□□ 1.59
CXCL16-203ENST00000574412 TRIM34Q9BYJ4 488 aa25■■□□□ 1.59
CXCL16-203ENST00000574412 GPHNQ9NQX3 736 aaPredicted RBP25■■□□□ 1.59
CXCL16-203ENST00000574412 ORC4O43929 436 aa24.99■■□□□ 1.59
CXCL16-203ENST00000574412 ESR2Q92731 530 aa24.99■■□□□ 1.59
CXCL16-203ENST00000574412 RASA1P20936 1047 aa24.98■■□□□ 1.59
CXCL16-203ENST00000574412 AK2P54819 239 aa24.98■■□□□ 1.59
CXCL16-203ENST00000574412 FGD1P98174 961 aa24.98■■□□□ 1.59
CXCL16-203ENST00000574412 EXOSC10Q01780 885 aaKnown RBP24.98■■□□□ 1.59
CXCL16-203ENST00000574412 DLK2Q6UY11 383 aa24.98■■□□□ 1.59
CXCL16-203ENST00000574412 Q6ZUG5 572 aa24.98■■□□□ 1.59
CXCL16-203ENST00000574412 TEPSINQ96N21 525 aa24.98■■□□□ 1.59
CXCL16-203ENST00000574412 EHD4Q9H223 541 aa24.98■■□□□ 1.59
CXCL16-203ENST00000574412 PGAP2Q9UHJ9 254 aa24.98■■□□□ 1.59
CXCL16-203ENST00000574412 PCP11498 1178 aaKnown RBP24.97■■□□□ 1.59
CXCL16-203ENST00000574412 SHMT1P34896 483 aa24.97■■□□□ 1.59
CXCL16-203ENST00000574412 MIGA2Q7L4E1 593 aa24.97■■□□□ 1.59
CXCL16-203ENST00000574412 DCPSQ96C86 337 aaKnown RBP24.97■■□□□ 1.59
CXCL16-203ENST00000574412 TSPY2A6NKD2 308 aa24.97■■□□□ 1.59
CXCL16-203ENST00000574412 POTEIP0CG38 1075 aa24.97■■□□□ 1.59
CXCL16-203ENST00000574412 POTEJP0CG39 1038 aa24.97■■□□□ 1.59
CXCL16-203ENST00000574412 TFAP4Q01664 338 aa24.97■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms