RNA–Protein interactions for RNA: ENST00000574095.1

NPLOC4-215, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 3

Gene NPLOC4, Length 277 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-215ENST00000574095 PHIPQ8WWQ0 1821 aa31.73■■■□□ 2.67
NPLOC4-215ENST00000574095 MAP3K12Q12852 859 aa31.73■■■□□ 2.67
NPLOC4-215ENST00000574095 PTPN22Q9Y2R2 807 aa31.73■■■□□ 2.67
NPLOC4-215ENST00000574095 FLT1P17948 1338 aa31.73■■■□□ 2.67
NPLOC4-215ENST00000574095 GPAT2Q6NUI2 795 aa31.72■■■□□ 2.67
NPLOC4-215ENST00000574095 DHX36Q9H2U1 1008 aaKnown RBP31.72■■■□□ 2.67
NPLOC4-215ENST00000574095 PI4KBQ9UBF8 816 aa31.72■■■□□ 2.67
NPLOC4-215ENST00000574095 SIPA1L1O43166 1804 aa31.71■■■□□ 2.67
NPLOC4-215ENST00000574095 RRP1BQ14684 758 aaKnown RBP31.71■■■□□ 2.67
NPLOC4-215ENST00000574095 ATAD5Q96QE3 1844 aa31.7■■■□□ 2.67
NPLOC4-215ENST00000574095 A0A0G2JLL6 359 aaPredicted RBP31.7■■■□□ 2.67
NPLOC4-215ENST00000574095 PRRT2Q7Z6L0 340 aaPredicted RBP31.7■■■□□ 2.67
NPLOC4-215ENST00000574095 CPA4Q9UI42 421 aa31.7■■■□□ 2.67
NPLOC4-215ENST00000574095 HERC5Q9UII4 1024 aaKnown RBP31.7■■■□□ 2.67
NPLOC4-215ENST00000574095 PALD1Q9ULE6 856 aa31.7■■■□□ 2.67
NPLOC4-215ENST00000574095 PTPRFP10586 1907 aa31.69■■■□□ 2.66
NPLOC4-215ENST00000574095 TRIM75PA6NK02 468 aa31.69■■■□□ 2.66
NPLOC4-215ENST00000574095 C17orf99Q6UX52 265 aa31.69■■■□□ 2.66
NPLOC4-215ENST00000574095 GADL1Q6ZQY3 521 aa31.69■■■□□ 2.66
NPLOC4-215ENST00000574095 DNAJC2Q99543 621 aaKnown RBP31.69■■■□□ 2.66
NPLOC4-215ENST00000574095 SAP30BPQ9UHR5 308 aaKnown RBP31.69■■■□□ 2.66
NPLOC4-215ENST00000574095 ZSWIM8A7E2V4 1837 aa31.68■■■□□ 2.66
NPLOC4-215ENST00000574095 CAP2P40123 477 aa31.68■■■□□ 2.66
NPLOC4-215ENST00000574095 TTF1Q15361 905 aaPredicted RBP31.68■■■□□ 2.66
NPLOC4-215ENST00000574095 FASTKD5Q7L8L6 764 aaKnown RBP31.68■■■□□ 2.66
NPLOC4-215ENST00000574095 PPIL4Q8WUA2 492 aaKnown RBP eCLIP31.68■■■□□ 2.66
NPLOC4-215ENST00000574095 ARHGAP39Q9C0H5 1083 aa31.68■■■□□ 2.66
NPLOC4-215ENST00000574095 ECM2O94769 699 aaPredicted RBP31.67■■■□□ 2.66
NPLOC4-215ENST00000574095 ARHGEF6Q15052 776 aa31.67■■■□□ 2.66
NPLOC4-215ENST00000574095 SLC4A8Q2Y0W8 1093 aa31.67■■■□□ 2.66
NPLOC4-215ENST00000574095 GOLIM4O00461 696 aa31.66■■■□□ 2.66
NPLOC4-215ENST00000574095 LACTBP83111 547 aaPredicted RBP31.66■■■□□ 2.66
NPLOC4-215ENST00000574095 MYH1P12882 1939 aa31.65■■■□□ 2.66
NPLOC4-215ENST00000574095 SMARCA5O60264 1052 aaPredicted RBP31.65■■■□□ 2.66
NPLOC4-215ENST00000574095 CYP2C8P10632 490 aa31.65■■■□□ 2.66
NPLOC4-215ENST00000574095 USP5P45974 858 aa31.65■■■□□ 2.66
NPLOC4-215ENST00000574095 KIF22Q14807 665 aa31.65■■■□□ 2.66
NPLOC4-215ENST00000574095 FOXP4Q8IVH2 680 aaPredicted RBP31.65■■■□□ 2.66
NPLOC4-215ENST00000574095 CRACR2BQ8N4Y2 399 aaPredicted RBP31.65■■■□□ 2.66
NPLOC4-215ENST00000574095 EDC3Q96F86 508 aaKnown RBP31.65■■■□□ 2.66
NPLOC4-215ENST00000574095 BOLA2Q9H3K6 86 aa31.65■■■□□ 2.66
NPLOC4-215ENST00000574095 ADGRA2Q96PE1 1338 aa31.65■■■□□ 2.66
NPLOC4-215ENST00000574095 HTTP42858 3142 aa31.65■■■□□ 2.66
NPLOC4-215ENST00000574095 SLC9C2Q5TAH2 1124 aa31.64■■■□□ 2.66
NPLOC4-215ENST00000574095 TMED8Q6PL24 325 aaPredicted RBP31.64■■■□□ 2.66
NPLOC4-215ENST00000574095 CERS3Q8IU89 383 aa31.64■■■□□ 2.66
NPLOC4-215ENST00000574095 PARK7Q99497 189 aaKnown RBP31.64■■■□□ 2.66
NPLOC4-215ENST00000574095 LRRCC1Q9C099 1032 aa31.64■■■□□ 2.66
NPLOC4-215ENST00000574095 DNAJC18Q9H819 358 aa31.64■■■□□ 2.66
NPLOC4-215ENST00000574095 PDE6AP16499 860 aa31.63■■■□□ 2.65
NPLOC4-215ENST00000574095 SPP2Q13103 211 aa31.63■■■□□ 2.65
NPLOC4-215ENST00000574095 METTL16Q86W50 562 aaKnown RBP31.63■■■□□ 2.65
NPLOC4-215ENST00000574095 TRIM34Q9BYJ4 488 aa31.63■■■□□ 2.65
NPLOC4-215ENST00000574095 HLA-DOAP06340 250 aa31.62■■■□□ 2.65
NPLOC4-215ENST00000574095 ZNF280CQ8ND82 737 aa31.62■■■□□ 2.65
NPLOC4-215ENST00000574095 YTHDC1Q96MU7 727 aaKnown RBP31.62■■■□□ 2.65
NPLOC4-215ENST00000574095 RIOK1Q9BRS2 568 aaKnown RBP31.62■■■□□ 2.65
NPLOC4-215ENST00000574095 MAGEB6P1A0A0J9YX57 407 aa31.61■■■□□ 2.65
NPLOC4-215ENST00000574095 USP17L5A8MUK1 530 aa31.61■■■□□ 2.65
NPLOC4-215ENST00000574095 ATP5JP18859 108 aa31.61■■■□□ 2.65
NPLOC4-215ENST00000574095 JAG1P78504 1218 aa31.61■■■□□ 2.65
NPLOC4-215ENST00000574095 PTCH2Q9Y6C5 1203 aa31.61■■■□□ 2.65
NPLOC4-215ENST00000574095 ZNF532Q9HCE3 1301 aa31.6■■■□□ 2.65
NPLOC4-215ENST00000574095 CTGFP29279 349 aa31.6■■■□□ 2.65
NPLOC4-215ENST00000574095 PAG1Q9NWQ8 432 aa31.6■■■□□ 2.65
NPLOC4-215ENST00000574095 TBC1D2Q9BYX2 928 aa31.59■■■□□ 2.65
NPLOC4-215ENST00000574095 SLC45A1Q9Y2W3 748 aa31.59■■■□□ 2.65
NPLOC4-215ENST00000574095 CENPFP49454 3210 aa31.58■■■□□ 2.65
NPLOC4-215ENST00000574095 GDF11O95390 407 aa31.58■■■□□ 2.65
NPLOC4-215ENST00000574095 BCRP11274 1271 aa31.58■■■□□ 2.65
NPLOC4-215ENST00000574095 PSMC4P43686 418 aa31.58■■■□□ 2.65
NPLOC4-215ENST00000574095 SHROOM1Q2M3G4 852 aaPredicted RBP31.58■■■□□ 2.65
NPLOC4-215ENST00000574095 TREML2Q5T2D2 321 aa31.58■■■□□ 2.65
NPLOC4-215ENST00000574095 DCTPP1Q9H773 170 aa31.58■■■□□ 2.65
NPLOC4-215ENST00000574095 AS3MTQ9HBK9 375 aa31.58■■■□□ 2.65
NPLOC4-215ENST00000574095 AGTPBP1Q9UPW5 1226 aa31.58■■■□□ 2.65
NPLOC4-215ENST00000574095 TCRBV5S4A2TA0A5A2 114 aa31.57■■■□□ 2.64
NPLOC4-215ENST00000574095 RRP1P56182 461 aaKnown RBP31.57■■■□□ 2.64
NPLOC4-215ENST00000574095 HAUS7Q99871 368 aa31.57■■■□□ 2.64
NPLOC4-215ENST00000574095 ASNSP08243 561 aa31.56■■■□□ 2.64
NPLOC4-215ENST00000574095 HMGCS2P54868 508 aa31.56■■■□□ 2.64
NPLOC4-215ENST00000574095 SLFNL1Q499Z3 407 aa31.56■■■□□ 2.64
NPLOC4-215ENST00000574095 ARMC5Q96C12 935 aa31.56■■■□□ 2.64
NPLOC4-215ENST00000574095 TNRC18O15417 2968 aaPredicted RBP31.55■■■□□ 2.64
NPLOC4-215ENST00000574095 GNRH1P01148 92 aa31.55■■■□□ 2.64
NPLOC4-215ENST00000574095 PROCA1Q8NCQ7 364 aaPredicted RBP31.55■■■□□ 2.64
NPLOC4-215ENST00000574095 TRIM47Q96LD4 638 aa31.55■■■□□ 2.64
NPLOC4-215ENST00000574095 PCDHB15Q9Y5E8 787 aa31.55■■■□□ 2.64
NPLOC4-215ENST00000574095 FMNL1O95466 1100 aaPredicted RBP31.54■■■□□ 2.64
NPLOC4-215ENST00000574095 SMCR8Q8TEV9 937 aaPredicted RBP31.54■■■□□ 2.64
NPLOC4-215ENST00000574095 WDR18Q9BV38 432 aa31.54■■■□□ 2.64
NPLOC4-215ENST00000574095 LOC285556D6RIA3 1793 aa31.53■■■□□ 2.64
NPLOC4-215ENST00000574095 SLC9C1Q4G0N8 1177 aa31.53■■■□□ 2.64
NPLOC4-215ENST00000574095 TTC6Q86TZ1 520 aa31.53■■■□□ 2.64
NPLOC4-215ENST00000574095 LCORLQ8N3X6 602 aa31.53■■■□□ 2.64
NPLOC4-215ENST00000574095 CRNKL1Q9BZJ0 848 aaKnown RBP31.53■■■□□ 2.64
NPLOC4-215ENST00000574095 SERPINB13Q9UIV8 391 aa31.53■■■□□ 2.64
NPLOC4-215ENST00000574095 ZBTB21Q9ULJ3 1066 aa31.53■■■□□ 2.64
NPLOC4-215ENST00000574095 NAV1Q8NEY1 1877 aa31.52■■■□□ 2.64
NPLOC4-215ENST00000574095 ADD2P35612 726 aa31.52■■■□□ 2.64
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms