RNA–Protein interactions for RNA: ENST00000573989.1

TRAPPC1-206, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-206ENST00000573989 APPP05067 770 aa15.3■□□□□ 0.04
TRAPPC1-206ENST00000573989 ZBTB48P10074 688 aaPredicted RBP15.3■□□□□ 0.04
TRAPPC1-206ENST00000573989 SDSP20132 328 aa15.3■□□□□ 0.04
TRAPPC1-206ENST00000573989 GIMAP6Q6P9H5 292 aa15.3■□□□□ 0.04
TRAPPC1-206ENST00000573989 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.3■□□□□ 0.04
TRAPPC1-206ENST00000573989 RASAL3Q86YV0 1011 aa15.3■□□□□ 0.04
TRAPPC1-206ENST00000573989 EHD4Q9H223 541 aa15.3■□□□□ 0.04
TRAPPC1-206ENST00000573989 ZNF112Q9UJU3 913 aa15.3■□□□□ 0.04
TRAPPC1-206ENST00000573989 MYH8P13535 1937 aa15.29■□□□□ 0.04
TRAPPC1-206ENST00000573989 DDX60LQ5H9U9 1706 aaKnown RBP15.29■□□□□ 0.04
TRAPPC1-206ENST00000573989 M0R2C6 588 aa15.29■□□□□ 0.04
TRAPPC1-206ENST00000573989 PRKAB2O43741 272 aa15.29■□□□□ 0.04
TRAPPC1-206ENST00000573989 CTNND1O60716 968 aaKnown RBP15.29■□□□□ 0.04
TRAPPC1-206ENST00000573989 MAP2K1Q02750 393 aaPredicted RBP15.29■□□□□ 0.04
TRAPPC1-206ENST00000573989 VGLL4Q14135 290 aa15.29■□□□□ 0.04
TRAPPC1-206ENST00000573989 MCMDC2Q4G0Z9 681 aa15.29■□□□□ 0.04
TRAPPC1-206ENST00000573989 ERO1BQ86YB8 467 aa15.29■□□□□ 0.04
TRAPPC1-206ENST00000573989 CLMNQ96JQ2 1002 aa15.29■□□□□ 0.04
TRAPPC1-206ENST00000573989 ELP3Q9H9T3 547 aa15.29■□□□□ 0.04
TRAPPC1-206ENST00000573989 PICK1Q9NRD5 415 aa15.29■□□□□ 0.04
TRAPPC1-206ENST00000573989 ARPP21Q9UBL0 812 aaPredicted RBP15.29■□□□□ 0.04
TRAPPC1-206ENST00000573989 SERPINB13Q9UIV8 391 aa15.29■□□□□ 0.04
TRAPPC1-206ENST00000573989 DOCK1Q14185 1865 aa15.29■□□□□ 0.04
TRAPPC1-206ENST00000573989 SIPA1L1O43166 1804 aa15.29■□□□□ 0.04
TRAPPC1-206ENST00000573989 CEP350Q5VT06 3117 aa15.28■□□□□ 0.04
TRAPPC1-206ENST00000573989 FAM155AB1AL88 458 aaPredicted RBP15.28■□□□□ 0.04
TRAPPC1-206ENST00000573989 PATL2C9JE40 543 aaKnown RBP15.28■□□□□ 0.04
TRAPPC1-206ENST00000573989 GSPT1P15170 499 aaKnown RBP15.28■□□□□ 0.04
TRAPPC1-206ENST00000573989 INPP5BP32019 993 aa15.28■□□□□ 0.04
TRAPPC1-206ENST00000573989 SLC4A8Q2Y0W8 1093 aa15.28■□□□□ 0.04
TRAPPC1-206ENST00000573989 NOL9Q5SY16 702 aaKnown RBP15.28■□□□□ 0.04
TRAPPC1-206ENST00000573989 JMYQ8N9B5 988 aa15.28■□□□□ 0.04
TRAPPC1-206ENST00000573989 ZKSCAN4Q969J2 545 aaPredicted RBP15.28■□□□□ 0.04
TRAPPC1-206ENST00000573989 SEC62Q99442 399 aaKnown RBP15.28■□□□□ 0.04
TRAPPC1-206ENST00000573989 BEGAINQ9BUH8 593 aa15.28■□□□□ 0.04
TRAPPC1-206ENST00000573989 ATAD5Q96QE3 1844 aa15.28■□□□□ 0.04
TRAPPC1-206ENST00000573989 THSD7BQ9C0I4 1608 aa15.28■□□□□ 0.04
TRAPPC1-206ENST00000573989 LAMB1P07942 1786 aa15.27■□□□□ 0.04
TRAPPC1-206ENST00000573989 GSG1L2A8MUP6 293 aa15.27■□□□□ 0.04
TRAPPC1-206ENST00000573989 PHF20L1A8MW92 1017 aa15.27■□□□□ 0.04
TRAPPC1-206ENST00000573989 AOC2O75106 756 aa15.27■□□□□ 0.04
TRAPPC1-206ENST00000573989 TDO2P48775 406 aa15.27■□□□□ 0.04
TRAPPC1-206ENST00000573989 SREBF2Q12772 1141 aa15.27■□□□□ 0.04
TRAPPC1-206ENST00000573989 NMIQ13287 307 aaPredicted RBP15.27■□□□□ 0.04
TRAPPC1-206ENST00000573989 SPRYD7Q5W111 196 aa15.27■□□□□ 0.04
TRAPPC1-206ENST00000573989 METTL16Q86W50 562 aaKnown RBP15.27■□□□□ 0.04
TRAPPC1-206ENST00000573989 SCYL3Q8IZE3 742 aa15.27■□□□□ 0.04
TRAPPC1-206ENST00000573989 RUFY2Q8WXA3 655 aa15.27■□□□□ 0.04
TRAPPC1-206ENST00000573989 OPTNQ96CV9 577 aa15.27■□□□□ 0.04
TRAPPC1-206ENST00000573989 WNK4Q96J92 1243 aa15.27■□□□□ 0.04
TRAPPC1-206ENST00000573989 GINM1Q9NU53 330 aa15.27■□□□□ 0.04
TRAPPC1-206ENST00000573989 SWAP70Q9UH65 585 aa15.27■□□□□ 0.04
TRAPPC1-206ENST00000573989 A0A0D9SFI3 127 aa15.26■□□□□ 0.03
TRAPPC1-206ENST00000573989 MANSC4A6NHS7 340 aaPredicted RBP15.26■□□□□ 0.03
TRAPPC1-206ENST00000573989 SPDYE5A6NIY4 337 aa15.26■□□□□ 0.03
TRAPPC1-206ENST00000573989 USP17L12C9JPN9 530 aa15.26■□□□□ 0.03
TRAPPC1-206ENST00000573989 USP17L21D6R901 530 aa15.26■□□□□ 0.03
TRAPPC1-206ENST00000573989 INHBEP58166 350 aa15.26■□□□□ 0.03
TRAPPC1-206ENST00000573989 PPATQ06203 517 aa15.26■□□□□ 0.03
TRAPPC1-206ENST00000573989 CWC27Q6UX04 472 aaKnown RBP15.26■□□□□ 0.03
TRAPPC1-206ENST00000573989 FAM227BQ96M60 508 aa15.26■□□□□ 0.03
TRAPPC1-206ENST00000573989 TBC1D2Q9BYX2 928 aa15.26■□□□□ 0.03
TRAPPC1-206ENST00000573989 NAPBQ9H115 298 aa15.26■□□□□ 0.03
TRAPPC1-206ENST00000573989 SNCAIPQ9Y6H5 919 aa15.26■□□□□ 0.03
TRAPPC1-206ENST00000573989 CCDC171Q6TFL3 1326 aa15.25■□□□□ 0.03
TRAPPC1-206ENST00000573989 FAM196BA6NMK8 535 aa15.25■□□□□ 0.03
TRAPPC1-206ENST00000573989 CAP2P40123 477 aa15.25■□□□□ 0.03
TRAPPC1-206ENST00000573989 PLCD1P51178 756 aa15.25■□□□□ 0.03
TRAPPC1-206ENST00000573989 KIF23Q02241 960 aaPredicted RBP15.25■□□□□ 0.03
TRAPPC1-206ENST00000573989 MKRN3Q13064 507 aaKnown RBP15.25■□□□□ 0.03
TRAPPC1-206ENST00000573989 PPIL2Q13356 520 aa15.25■□□□□ 0.03
TRAPPC1-206ENST00000573989 SBK1Q52WX2 424 aa15.25■□□□□ 0.03
TRAPPC1-206ENST00000573989 BMP2KLQ5H9B9 411 aa15.25■□□□□ 0.03
TRAPPC1-206ENST00000573989 C12orf60Q5U649 245 aa15.25■□□□□ 0.03
TRAPPC1-206ENST00000573989 IFNL3Q8IZI9 196 aa15.25■□□□□ 0.03
TRAPPC1-206ENST00000573989 OTUD5Q96G74 571 aa15.25■□□□□ 0.03
TRAPPC1-206ENST00000573989 ZNF287Q9HBT7 754 aa15.25■□□□□ 0.03
TRAPPC1-206ENST00000573989 SLC3A2P08195 630 aaKnown RBP15.24■□□□□ 0.03
TRAPPC1-206ENST00000573989 ASNSP08243 561 aa15.24■□□□□ 0.03
TRAPPC1-206ENST00000573989 GTF2A2P52657 109 aa15.24■□□□□ 0.03
TRAPPC1-206ENST00000573989 CERKLQ49MI3 558 aaPredicted RBP15.24■□□□□ 0.03
TRAPPC1-206ENST00000573989 CTR9Q6PD62 1173 aa15.24■□□□□ 0.03
TRAPPC1-206ENST00000573989 CCDC129Q6ZRS4 1044 aa15.24■□□□□ 0.03
TRAPPC1-206ENST00000573989 AS3MTQ9HBK9 375 aa15.24■□□□□ 0.03
TRAPPC1-206ENST00000573989 CABP5Q9NP86 173 aa15.24■□□□□ 0.03
TRAPPC1-206ENST00000573989 RAD50Q92878 1312 aa15.23■□□□□ 0.03
TRAPPC1-206ENST00000573989 MINDY4BA8MYZ0 360 aa15.23■□□□□ 0.03
TRAPPC1-206ENST00000573989 PTPRAP18433 802 aa15.23■□□□□ 0.03
TRAPPC1-206ENST00000573989 GABPAQ06546 454 aa15.23■□□□□ 0.03
TRAPPC1-206ENST00000573989 SNAPC2Q13487 334 aa15.23■□□□□ 0.03
TRAPPC1-206ENST00000573989 OTUD7BQ6GQQ9 843 aa15.23■□□□□ 0.03
TRAPPC1-206ENST00000573989 TATDN1Q6P1N9 297 aa15.23■□□□□ 0.03
TRAPPC1-206ENST00000573989 DNAJC18Q9H819 358 aa15.23■□□□□ 0.03
TRAPPC1-206ENST00000573989 USP17L5A8MUK1 530 aa15.22■□□□□ 0.03
TRAPPC1-206ENST00000573989 CA12O43570 354 aa15.22■□□□□ 0.03
TRAPPC1-206ENST00000573989 SLURP2P0DP57 97 aa15.22■□□□□ 0.03
TRAPPC1-206ENST00000573989 CYP2D6P10635 497 aa15.22■□□□□ 0.03
TRAPPC1-206ENST00000573989 CETPP11597 493 aa15.22■□□□□ 0.03
TRAPPC1-206ENST00000573989 TM4SF4P48230 202 aa15.22■□□□□ 0.03
TRAPPC1-206ENST00000573989 CASC1Q6TDU7 716 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms