RNA–Protein interactions for RNA: ENST00000573891.6

CACNA1A-203, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 896 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-203ENST00000573891 SNAPC2Q13487 334 aa7.57□□□□□ -1.2
CACNA1A-203ENST00000573891 DIXDC1Q155Q3 683 aa7.57□□□□□ -1.2
CACNA1A-203ENST00000573891 GLIPR1L2Q4G1C9 344 aa7.57□□□□□ -1.2
CACNA1A-203ENST00000573891 LRRC24Q50LG9 513 aa7.57□□□□□ -1.2
CACNA1A-203ENST00000573891 APOBEC3HQ6NTF7 200 aaKnown RBP7.57□□□□□ -1.2
CACNA1A-203ENST00000573891 SLC4A10Q6U841 1118 aa7.57□□□□□ -1.2
CACNA1A-203ENST00000573891 VPS37DQ86XT2 251 aa7.57□□□□□ -1.2
CACNA1A-203ENST00000573891 ANKRD44Q8N8A2 993 aa7.57□□□□□ -1.2
CACNA1A-203ENST00000573891 TTC13Q8NBP0 860 aa7.57□□□□□ -1.2
CACNA1A-203ENST00000573891 TEKT1Q969V4 418 aa7.57□□□□□ -1.2
CACNA1A-203ENST00000573891 HOOK2Q96ED9 719 aa7.57□□□□□ -1.2
CACNA1A-203ENST00000573891 WRNIP1Q96S55 665 aa7.57□□□□□ -1.2
CACNA1A-203ENST00000573891 ARHGAP39Q9C0H5 1083 aa7.57□□□□□ -1.2
CACNA1A-203ENST00000573891 BICC1Q9H694 974 aaKnown RBP7.57□□□□□ -1.2
CACNA1A-203ENST00000573891 MRS2Q9HD23 443 aa7.57□□□□□ -1.2
CACNA1A-203ENST00000573891 IQSEC3Q9UPP2 1182 aaPredicted RBP7.57□□□□□ -1.2
CACNA1A-203ENST00000573891 SUGT1Q9Y2Z0 365 aa7.57□□□□□ -1.2
CACNA1A-203ENST00000573891 CUL9Q8IWT3 2517 aa7.57□□□□□ -1.2
CACNA1A-203ENST00000573891 MAST3O60307 1309 aa7.56□□□□□ -1.2
CACNA1A-203ENST00000573891 IGSF3O75054 1194 aa7.56□□□□□ -1.2
CACNA1A-203ENST00000573891 WDHD1O75717 1129 aaPredicted RBP7.56□□□□□ -1.2
CACNA1A-203ENST00000573891 PDE8BO95263 885 aa7.56□□□□□ -1.2
CACNA1A-203ENST00000573891 GNRH1P01148 92 aa7.56□□□□□ -1.2
CACNA1A-203ENST00000573891 RBM10P98175 930 aaKnown RBP7.56□□□□□ -1.2
CACNA1A-203ENST00000573891 SLC4A8Q2Y0W8 1093 aa7.56□□□□□ -1.2
CACNA1A-203ENST00000573891 CAVIN4Q5BKX8 364 aa7.56□□□□□ -1.2
CACNA1A-203ENST00000573891 METTL24Q5JXM2 366 aa7.56□□□□□ -1.2
CACNA1A-203ENST00000573891 PADI6Q6TGC4 694 aa7.56□□□□□ -1.2
CACNA1A-203ENST00000573891 SH3TC2Q8TF17 1288 aa7.56□□□□□ -1.2
CACNA1A-203ENST00000573891 ZKSCAN4Q969J2 545 aaPredicted RBP7.56□□□□□ -1.2
CACNA1A-203ENST00000573891 TMOD2Q9NZR1 351 aa7.56□□□□□ -1.2
CACNA1A-203ENST00000573891 LIMD1Q9UGP4 676 aa7.56□□□□□ -1.2
CACNA1A-203ENST00000573891 ADGRA2Q96PE1 1338 aa7.55□□□□□ -1.2
CACNA1A-203ENST00000573891 H0YGN5 161 aa7.55□□□□□ -1.2
CACNA1A-203ENST00000573891 FRAT2O75474 233 aaPredicted RBP7.55□□□□□ -1.2
CACNA1A-203ENST00000573891 FGFR2P21802 821 aa7.55□□□□□ -1.2
CACNA1A-203ENST00000573891 CTGFP29279 349 aa7.55□□□□□ -1.2
CACNA1A-203ENST00000573891 INPP5BP32019 993 aa7.55□□□□□ -1.2
CACNA1A-203ENST00000573891 BCAMP50895 628 aa7.55□□□□□ -1.2
CACNA1A-203ENST00000573891 PRMT2P55345 433 aa7.55□□□□□ -1.2
CACNA1A-203ENST00000573891 PPATQ06203 517 aa7.55□□□□□ -1.2
CACNA1A-203ENST00000573891 KIF22Q14807 665 aa7.55□□□□□ -1.2
CACNA1A-203ENST00000573891 PUM3Q15397 648 aaKnown RBP7.55□□□□□ -1.2
CACNA1A-203ENST00000573891 TUSC1Q2TAM9 212 aa7.55□□□□□ -1.2
CACNA1A-203ENST00000573891 DCAF15Q66K64 600 aa7.55□□□□□ -1.2
CACNA1A-203ENST00000573891 HHIPL2Q6UWX4 724 aa7.55□□□□□ -1.2
CACNA1A-203ENST00000573891 C17orf99Q6UX52 265 aa7.55□□□□□ -1.2
CACNA1A-203ENST00000573891 SHISA4Q96DD7 197 aa7.55□□□□□ -1.2
CACNA1A-203ENST00000573891 ZNF112Q9UJU3 913 aa7.55□□□□□ -1.2
CACNA1A-203ENST00000573891 KCNH4Q9UQ05 1017 aa7.55□□□□□ -1.2
CACNA1A-203ENST00000573891 COLQQ9Y215 455 aaPredicted RBP7.55□□□□□ -1.2
CACNA1A-203ENST00000573891 SZT2Q5T011 3432 aa7.55□□□□□ -1.2
CACNA1A-203ENST00000573891 POTEB2H3BUK9 544 aa7.54□□□□□ -1.2
CACNA1A-203ENST00000573891 MYCP01106 439 aaPredicted RBP7.54□□□□□ -1.2
CACNA1A-203ENST00000573891 IFIT1P09914 478 aaKnown RBP7.54□□□□□ -1.2
CACNA1A-203ENST00000573891 IRF5Q13568 498 aa7.54□□□□□ -1.2
CACNA1A-203ENST00000573891 MOGSQ13724 837 aa7.54□□□□□ -1.2
CACNA1A-203ENST00000573891 ANKRD23Q86SG2 305 aa7.54□□□□□ -1.2
CACNA1A-203ENST00000573891 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.54□□□□□ -1.2
CACNA1A-203ENST00000573891 KLHDC4Q8TBB5 520 aa7.54□□□□□ -1.2
CACNA1A-203ENST00000573891 FAM151AQ8WW52 585 aa7.54□□□□□ -1.2
CACNA1A-203ENST00000573891 TRIM47Q96LD4 638 aa7.54□□□□□ -1.2
CACNA1A-203ENST00000573891 ZNF341Q9BYN7 854 aa7.54□□□□□ -1.2
CACNA1A-203ENST00000573891 RBM27Q9P2N5 1060 aaKnown RBP7.54□□□□□ -1.2
CACNA1A-203ENST00000573891 SRRDQ9UH36 339 aa7.54□□□□□ -1.2
CACNA1A-203ENST00000573891 CPA4Q9UI42 421 aa7.54□□□□□ -1.2
CACNA1A-203ENST00000573891 DAGLAQ9Y4D2 1042 aa7.54□□□□□ -1.2
CACNA1A-203ENST00000573891 ZSWIM8A7E2V4 1837 aa7.54□□□□□ -1.2
CACNA1A-203ENST00000573891 ZNF521Q96K83 1311 aa7.53□□□□□ -1.2
CACNA1A-203ENST00000573891 EYA2O00167 538 aa7.53□□□□□ -1.2
CACNA1A-203ENST00000573891 PDHXO00330 501 aa7.53□□□□□ -1.2
CACNA1A-203ENST00000573891 PSMC4P43686 418 aa7.53□□□□□ -1.2
CACNA1A-203ENST00000573891 RFX5P48382 616 aaPredicted RBP7.53□□□□□ -1.2
CACNA1A-203ENST00000573891 NFIAQ12857 509 aa7.53□□□□□ -1.2
CACNA1A-203ENST00000573891 MTFR1Q15390 333 aa7.53□□□□□ -1.2
CACNA1A-203ENST00000573891 NOL9Q5SY16 702 aaKnown RBP7.53□□□□□ -1.2
CACNA1A-203ENST00000573891 C6orf132Q5T0Z8 1188 aa7.53□□□□□ -1.2
CACNA1A-203ENST00000573891 MIGA2Q7L4E1 593 aa7.53□□□□□ -1.2
CACNA1A-203ENST00000573891 UBE2Q1Q7Z7E8 422 aa7.53□□□□□ -1.2
CACNA1A-203ENST00000573891 TICAM2Q86XR7 235 aa7.53□□□□□ -1.2
CACNA1A-203ENST00000573891 MRPL50Q8N5N7 158 aaKnown RBP7.53□□□□□ -1.2
CACNA1A-203ENST00000573891 WDR66Q8TBY9 1149 aa7.53□□□□□ -1.2
CACNA1A-203ENST00000573891 SPIRE2Q8WWL2 714 aa7.53□□□□□ -1.2
CACNA1A-203ENST00000573891 LPIN2Q92539 896 aa7.53□□□□□ -1.2
CACNA1A-203ENST00000573891 NAP1L5Q96NT1 182 aaPredicted RBP7.53□□□□□ -1.2
CACNA1A-203ENST00000573891 USP44Q9H0E7 712 aa7.53□□□□□ -1.2
CACNA1A-203ENST00000573891 GDPD2Q9HCC8 539 aa7.53□□□□□ -1.2
CACNA1A-203ENST00000573891 ATRNL1Q5VV63 1379 aa7.53□□□□□ -1.2
CACNA1A-203ENST00000573891 PTPRCP08575 1304 aa7.52□□□□□ -1.2
CACNA1A-203ENST00000573891 GJB1P08034 283 aa7.52□□□□□ -1.21
CACNA1A-203ENST00000573891 BCRP11274 1271 aa7.52□□□□□ -1.21
CACNA1A-203ENST00000573891 SLC5A1P13866 664 aa7.52□□□□□ -1.21
CACNA1A-203ENST00000573891 HOXD10P28358 340 aa7.52□□□□□ -1.21
CACNA1A-203ENST00000573891 PRDX5P30044 214 aa7.52□□□□□ -1.21
CACNA1A-203ENST00000573891 GRK4P32298 578 aa7.52□□□□□ -1.21
CACNA1A-203ENST00000573891 GJA8P48165 433 aa7.52□□□□□ -1.21
CACNA1A-203ENST00000573891 TCP10Q12799 353 aa7.52□□□□□ -1.21
CACNA1A-203ENST00000573891 CDC42EP5Q6NZY7 148 aa7.52□□□□□ -1.21
CACNA1A-203ENST00000573891 RGS22Q8NE09 1264 aa7.52□□□□□ -1.21
CACNA1A-203ENST00000573891 NKX2-3Q8TAU0 364 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms