RNA–Protein interactions for RNA: ENST00000573577.5

RPAIN-213, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,282 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-213ENST00000573577 ERO1BQ86YB8 467 aa16.33■□□□□ 0.2
RPAIN-213ENST00000573577 TGFBRAP1Q8WUH2 860 aa16.33■□□□□ 0.2
RPAIN-213ENST00000573577 EVI5LQ96CN4 794 aa16.33■□□□□ 0.2
RPAIN-213ENST00000573577 OTUD5Q96G74 571 aa16.33■□□□□ 0.2
RPAIN-213ENST00000573577 PPP4R2Q9NY27 417 aa16.33■□□□□ 0.2
RPAIN-213ENST00000573577 ZNF532Q9HCE3 1301 aa16.33■□□□□ 0.2
RPAIN-213ENST00000573577 AK9Q5TCS8 1911 aa16.33■□□□□ 0.2
RPAIN-213ENST00000573577 FLT1P17948 1338 aa16.32■□□□□ 0.2
RPAIN-213ENST00000573577 ADD2P35612 726 aa16.32■□□□□ 0.2
RPAIN-213ENST00000573577 NOL9Q5SY16 702 aaKnown RBP16.32■□□□□ 0.2
RPAIN-213ENST00000573577 MAPKAPK5Q8IW41 473 aa16.32■□□□□ 0.2
RPAIN-213ENST00000573577 FSD1Q9BTV5 496 aa16.32■□□□□ 0.2
RPAIN-213ENST00000573577 MAGEB6P1A0A0J9YX57 407 aa16.31■□□□□ 0.2
RPAIN-213ENST00000573577 TCRBV5S4A2TA0A5A2 114 aa16.31■□□□□ 0.2
RPAIN-213ENST00000573577 TESPA1A2RU30 521 aaPredicted RBP16.31■□□□□ 0.2
RPAIN-213ENST00000573577 PHF20L1A8MW92 1017 aa16.31■□□□□ 0.2
RPAIN-213ENST00000573577 TBC1D12O60347 775 aa16.31■□□□□ 0.2
RPAIN-213ENST00000573577 ALDH1A1P00352 501 aa16.31■□□□□ 0.2
RPAIN-213ENST00000573577 TICAM2Q86XR7 235 aa16.31■□□□□ 0.2
RPAIN-213ENST00000573577 IFNL1Q8IU54 200 aa16.31■□□□□ 0.2
RPAIN-213ENST00000573577 TNS4Q8IZW8 715 aa16.31■□□□□ 0.2
RPAIN-213ENST00000573577 MS4A4AQ96JQ5 239 aa16.31■□□□□ 0.2
RPAIN-213ENST00000573577 DHX36Q9H2U1 1008 aaKnown RBP16.31■□□□□ 0.2
RPAIN-213ENST00000573577 TRIM6-TRIM34B2RNG4 842 aa16.3■□□□□ 0.2
RPAIN-213ENST00000573577 IGF2BP3O00425 579 aaKnown RBP eCLIP16.3■□□□□ 0.2
RPAIN-213ENST00000573577 RNF113AO15541 343 aaKnown RBP16.3■□□□□ 0.2
RPAIN-213ENST00000573577 SLURP2P0DP57 97 aa16.3■□□□□ 0.2
RPAIN-213ENST00000573577 GTF2A2P52657 109 aa16.3■□□□□ 0.2
RPAIN-213ENST00000573577 PPATQ06203 517 aa16.3■□□□□ 0.2
RPAIN-213ENST00000573577 PPIL2Q13356 520 aa16.3■□□□□ 0.2
RPAIN-213ENST00000573577 RIOK1Q9BRS2 568 aaKnown RBP16.3■□□□□ 0.2
RPAIN-213ENST00000573577 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.3■□□□□ 0.22e-7■■□□□ 11.6
RPAIN-213ENST00000573577 FOCADQ5VW36 1801 aa16.29■□□□□ 0.2
RPAIN-213ENST00000573577 FAM196BA6NMK8 535 aa16.29■□□□□ 0.2
RPAIN-213ENST00000573577 IRF6O14896 467 aa16.29■□□□□ 0.2
RPAIN-213ENST00000573577 TBC1D8O95759 1140 aa16.29■□□□□ 0.2
RPAIN-213ENST00000573577 PDE4AP27815 886 aa16.29■□□□□ 0.2
RPAIN-213ENST00000573577 SCYL3Q8IZE3 742 aa16.29■□□□□ 0.2
RPAIN-213ENST00000573577 BRI3BPQ8WY22 251 aa16.29■□□□□ 0.2
RPAIN-213ENST00000573577 CFHR5Q9BXR6 569 aa16.29■□□□□ 0.2
RPAIN-213ENST00000573577 PI4KBQ9UBF8 816 aa16.29■□□□□ 0.2
RPAIN-213ENST00000573577 HERC5Q9UII4 1024 aaKnown RBP16.29■□□□□ 0.2
RPAIN-213ENST00000573577 CDK5RAP2Q96SN8 1893 aa16.29■□□□□ 0.2
RPAIN-213ENST00000573577 CCL15-CCL14A0A0B4J2E2 113 aa16.28■□□□□ 0.2
RPAIN-213ENST00000573577 CTNND1O60716 968 aaKnown RBP16.28■□□□□ 0.2
RPAIN-213ENST00000573577 USP5P45974 858 aa16.28■□□□□ 0.2
RPAIN-213ENST00000573577 SNAPC2Q13487 334 aa16.28■□□□□ 0.2
RPAIN-213ENST00000573577 CCL15Q16663 113 aa16.28■□□□□ 0.2
RPAIN-213ENST00000573577 OTUD7BQ6GQQ9 843 aa16.28■□□□□ 0.2
RPAIN-213ENST00000573577 APPBP2Q92624 585 aa16.28■□□□□ 0.2
RPAIN-213ENST00000573577 RILPL2Q969X0 211 aa16.28■□□□□ 0.2
RPAIN-213ENST00000573577 PTPN18Q99952 460 aa16.28■□□□□ 0.2
RPAIN-213ENST00000573577 CRNKL1Q9BZJ0 848 aaKnown RBP16.28■□□□□ 0.2
RPAIN-213ENST00000573577 PICK1Q9NRD5 415 aa16.28■□□□□ 0.2
RPAIN-213ENST00000573577 SAP30BPQ9UHR5 308 aaKnown RBP16.28■□□□□ 0.2
RPAIN-213ENST00000573577 PALD1Q9ULE6 856 aa16.28■□□□□ 0.2
RPAIN-213ENST00000573577 CETPP11597 493 aa16.27■□□□□ 0.2
RPAIN-213ENST00000573577 MKRN4PQ13434 485 aaPredicted RBP16.27■□□□□ 0.2
RPAIN-213ENST00000573577 MBD4O95243 580 aa16.26■□□□□ 0.19
RPAIN-213ENST00000573577 HLA-DOAP06340 250 aa16.26■□□□□ 0.19
RPAIN-213ENST00000573577 PTPRAP18433 802 aa16.26■□□□□ 0.19
RPAIN-213ENST00000573577 SLFNL1Q499Z3 407 aa16.26■□□□□ 0.19
RPAIN-213ENST00000573577 NOM1Q5C9Z4 860 aaKnown RBP16.26■□□□□ 0.19
RPAIN-213ENST00000573577 TTC22Q5TAA0 569 aa16.26■□□□□ 0.19
RPAIN-213ENST00000573577 METTL16Q86W50 562 aaKnown RBP16.26■□□□□ 0.19
RPAIN-213ENST00000573577 FOXP4Q8IVH2 680 aaPredicted RBP16.26■□□□□ 0.19
RPAIN-213ENST00000573577 LCORLQ8N3X6 602 aa16.26■□□□□ 0.19
RPAIN-213ENST00000573577 KCNH4Q9UQ05 1017 aa16.26■□□□□ 0.19
RPAIN-213ENST00000573577 SIPA1L1O43166 1804 aa16.26■□□□□ 0.19
RPAIN-213ENST00000573577 MYH7P12883 1935 aa16.25■□□□□ 0.19
RPAIN-213ENST00000573577 DOCK1Q14185 1865 aa16.25■□□□□ 0.19
RPAIN-213ENST00000573577 HIP1O00291 1037 aa16.25■□□□□ 0.19
RPAIN-213ENST00000573577 SLC4A8Q2Y0W8 1093 aa16.25■□□□□ 0.19
RPAIN-213ENST00000573577 CRACR2BQ8N4Y2 399 aaPredicted RBP16.25■□□□□ 0.19
RPAIN-213ENST00000573577 DDRGK1Q96HY6 314 aa16.25■□□□□ 0.19
RPAIN-213ENST00000573577 TRIM34Q9BYJ4 488 aa16.25■□□□□ 0.19
RPAIN-213ENST00000573577 PUS7LQ9H0K6 701 aaKnown RBP16.25■□□□□ 0.19
RPAIN-213ENST00000573577 R3HDMLQ9H3Y0 253 aa16.25■□□□□ 0.19
RPAIN-213ENST00000573577 DNAJC18Q9H819 358 aa16.25■□□□□ 0.19
RPAIN-213ENST00000573577 ARMT1Q9H993 441 aa16.25■□□□□ 0.19
RPAIN-213ENST00000573577 ZHX2Q9Y6X8 837 aa16.25■□□□□ 0.19
RPAIN-213ENST00000573577 GPR25O00155 361 aa16.24■□□□□ 0.19
RPAIN-213ENST00000573577 CHGBP05060 677 aa16.24■□□□□ 0.19
RPAIN-213ENST00000573577 CAP2P40123 477 aa16.24■□□□□ 0.19
RPAIN-213ENST00000573577 CRHR2Q13324 411 aa16.24■□□□□ 0.19
RPAIN-213ENST00000573577 ZMYM1Q5SVZ6 1142 aa16.24■□□□□ 0.19
RPAIN-213ENST00000573577 FAM43AQ8N2R8 423 aa16.24■□□□□ 0.19
RPAIN-213ENST00000573577 ZNF296Q8WUU4 475 aaPredicted RBP16.24■□□□□ 0.19
RPAIN-213ENST00000573577 OSBP2Q969R2 916 aa16.24■□□□□ 0.19
RPAIN-213ENST00000573577 DDX60LQ5H9U9 1706 aaKnown RBP16.24■□□□□ 0.19
RPAIN-213ENST00000573577 BTBD19C9JJ37 291 aa16.23■□□□□ 0.19
RPAIN-213ENST00000573577 CXCL11O14625 94 aa16.23■□□□□ 0.19
RPAIN-213ENST00000573577 GNAT2P19087 354 aa16.23■□□□□ 0.19
RPAIN-213ENST00000573577 RRP1BQ14684 758 aaKnown RBP16.23■□□□□ 0.19
RPAIN-213ENST00000573577 TTC6Q86TZ1 520 aa16.23■□□□□ 0.19
RPAIN-213ENST00000573577 EHD4Q9H223 541 aa16.23■□□□□ 0.19
RPAIN-213ENST00000573577 ZCCHC17Q9NP64 241 aaKnown RBP16.23■□□□□ 0.19
RPAIN-213ENST00000573577 HELLSQ9NRZ9 838 aa16.23■□□□□ 0.19
RPAIN-213ENST00000573577 ATP8A2Q9NTI2 1148 aa16.23■□□□□ 0.19
RPAIN-213ENST00000573577 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms