RNA–Protein interactions for RNA: ENST00000573126.1

RPAIN-212, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 2,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-212ENST00000573126 CUTAO60888 179 aa12.92□□□□□ -0.34
RPAIN-212ENST00000573126 NTSR2O95665 410 aa12.92□□□□□ -0.34
RPAIN-212ENST00000573126 SERPINC1P01008 464 aa12.92□□□□□ -0.34
RPAIN-212ENST00000573126 CYP7A1P22680 504 aa12.92□□□□□ -0.34
RPAIN-212ENST00000573126 MYL5Q02045 173 aa12.92□□□□□ -0.34
RPAIN-212ENST00000573126 ITPK1Q13572 414 aa12.92□□□□□ -0.34
RPAIN-212ENST00000573126 KRBA2Q6ZNG9 492 aa12.92□□□□□ -0.34
RPAIN-212ENST00000573126 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.92□□□□□ -0.34
RPAIN-212ENST00000573126 V9GYY5 206 aaPredicted RBP12.92□□□□□ -0.34
RPAIN-212ENST00000573126 GNAT2P19087 354 aa12.91□□□□□ -0.34
RPAIN-212ENST00000573126 GYG1P46976 350 aa12.91□□□□□ -0.34
RPAIN-212ENST00000573126 PPARAQ07869 468 aa12.91□□□□□ -0.34
RPAIN-212ENST00000573126 CFAP100Q494V2 611 aa12.91□□□□□ -0.34
RPAIN-212ENST00000573126 CCDC150Q8NCX0 1101 aa12.91□□□□□ -0.34
RPAIN-212ENST00000573126 WASF1Q92558 559 aa12.91□□□□□ -0.34
RPAIN-212ENST00000573126 UBAC1Q9BSL1 405 aa12.91□□□□□ -0.34
RPAIN-212ENST00000573126 PNPLA7Q6ZV29 1317 aa12.91□□□□□ -0.34
RPAIN-212ENST00000573126 ADAMTS2O95450 1211 aa12.91□□□□□ -0.34
RPAIN-212ENST00000573126 BMP6P22004 513 aa12.91□□□□□ -0.34
RPAIN-212ENST00000573126 UBASH3AP57075 661 aa12.91□□□□□ -0.34
RPAIN-212ENST00000573126 DDB1Q16531 1140 aa12.91□□□□□ -0.34
RPAIN-212ENST00000573126 ZNF654Q8IZM8 581 aa12.91□□□□□ -0.34
RPAIN-212ENST00000573126 PDILTQ8N807 584 aa12.91□□□□□ -0.34
RPAIN-212ENST00000573126 OXER1Q8TDS5 423 aa12.91□□□□□ -0.34
RPAIN-212ENST00000573126 RAI14Q9P0K7 980 aa12.91□□□□□ -0.34
RPAIN-212ENST00000573126 ZNF215Q9UL58 517 aaPredicted RBP12.91□□□□□ -0.34
RPAIN-212ENST00000573126 PCDHB6Q9Y5E3 794 aa12.91□□□□□ -0.34
RPAIN-212ENST00000573126 FAM237AA0A1B0GTK4 181 aa12.9□□□□□ -0.34
RPAIN-212ENST00000573126 PARP10Q53GL7 1025 aa12.9□□□□□ -0.34
RPAIN-212ENST00000573126 CRACR2BQ8N4Y2 399 aaPredicted RBP12.9□□□□□ -0.34
RPAIN-212ENST00000573126 FANCBQ8NB91 859 aa12.9□□□□□ -0.34
RPAIN-212ENST00000573126 FANCLQ9NW38 375 aa12.9□□□□□ -0.34
RPAIN-212ENST00000573126 NHSL1Q5SYE7 1610 aa12.9□□□□□ -0.34
RPAIN-212ENST00000573126 hCG_1642624A0A1W2PR95 340 aa12.9□□□□□ -0.34
RPAIN-212ENST00000573126 POLR2DO15514 142 aaKnown RBP12.9□□□□□ -0.34
RPAIN-212ENST00000573126 PDE4BQ07343 736 aa12.9□□□□□ -0.34
RPAIN-212ENST00000573126 GOLGA8FQ08AF8 430 aa12.9□□□□□ -0.34
RPAIN-212ENST00000573126 GOLGA8DPQ0D2H9 430 aa12.9□□□□□ -0.34
RPAIN-212ENST00000573126 CYP2D7A0A087X1C5 515 aa12.9□□□□□ -0.35
RPAIN-212ENST00000573126 PRDM1O75626 825 aa12.9□□□□□ -0.35
RPAIN-212ENST00000573126 DEXIO95424 95 aa12.9□□□□□ -0.35
RPAIN-212ENST00000573126 ZNF827Q17R98 1081 aa12.9□□□□□ -0.35
RPAIN-212ENST00000573126 OLFM4Q6UX06 510 aa12.9□□□□□ -0.35
RPAIN-212ENST00000573126 GRAMD1CQ8IYS0 662 aa12.9□□□□□ -0.35
RPAIN-212ENST00000573126 KIF18AQ8NI77 898 aa12.9□□□□□ -0.35
RPAIN-212ENST00000573126 PPP1R13BQ96KQ4 1090 aa12.9□□□□□ -0.35
RPAIN-212ENST00000573126 TNKSO95271 1327 aa12.89□□□□□ -0.35
RPAIN-212ENST00000573126 TMEM232C9JQI7 657 aa12.89□□□□□ -0.35
RPAIN-212ENST00000573126 C3orf67Q6ZVT6 689 aa12.89□□□□□ -0.35
RPAIN-212ENST00000573126 RNF41Q9H4P4 317 aaPredicted RBP12.89□□□□□ -0.35
RPAIN-212ENST00000573126 CABP5Q9NP86 173 aa12.89□□□□□ -0.35
RPAIN-212ENST00000573126 FBXO2Q9UK22 296 aaPredicted RBP12.89□□□□□ -0.35
RPAIN-212ENST00000573126 CCDC196A0A1B0GTZ2 297 aa12.89□□□□□ -0.35
RPAIN-212ENST00000573126 PRR29P0C7W0 189 aa12.89□□□□□ -0.35
RPAIN-212ENST00000573126 RILPL1Q5EBL4 403 aa12.89□□□□□ -0.35
RPAIN-212ENST00000573126 USP49Q70CQ1 688 aa12.89□□□□□ -0.35
RPAIN-212ENST00000573126 FOXP1Q9H334 677 aaPredicted RBP12.89□□□□□ -0.35
RPAIN-212ENST00000573126 MAGEB6P1A0A0J9YX57 407 aa12.88□□□□□ -0.35
RPAIN-212ENST00000573126 FAM205CA6NFA0 338 aa12.88□□□□□ -0.35
RPAIN-212ENST00000573126 PTPREP23469 700 aa12.88□□□□□ -0.35
RPAIN-212ENST00000573126 POSTNQ15063 836 aa12.88□□□□□ -0.35
RPAIN-212ENST00000573126 SYT10Q6XYQ8 523 aa12.88□□□□□ -0.35
RPAIN-212ENST00000573126 MARCH10Q8NA82 808 aaPredicted RBP12.88□□□□□ -0.35
RPAIN-212ENST00000573126 VPS54Q9P1Q0 977 aa12.88□□□□□ -0.35
RPAIN-212ENST00000573126 SERTAD1Q9UHV2 236 aa12.88□□□□□ -0.35
RPAIN-212ENST00000573126 COL4A1P02462 1669 aa12.88□□□□□ -0.35
RPAIN-212ENST00000573126 NID2Q14112 1375 aa12.88□□□□□ -0.35
RPAIN-212ENST00000573126 KCNQ4P56696 695 aa12.88□□□□□ -0.35
RPAIN-212ENST00000573126 DYNLL1P63167 89 aaKnown RBP12.88□□□□□ -0.35
RPAIN-212ENST00000573126 MDM2Q00987 491 aaPredicted RBP12.88□□□□□ -0.35
RPAIN-212ENST00000573126 TMTC2Q8N394 836 aa12.88□□□□□ -0.35
RPAIN-212ENST00000573126 ESR2Q92731 530 aa12.88□□□□□ -0.35
RPAIN-212ENST00000573126 SHISA4Q96DD7 197 aa12.88□□□□□ -0.35
RPAIN-212ENST00000573126 KCND1Q9NSA2 647 aa12.88□□□□□ -0.35
RPAIN-212ENST00000573126 ECM29Q5VYK3 1845 aa12.88□□□□□ -0.35
RPAIN-212ENST00000573126 DOT1LQ8TEK3 1739 aa12.87□□□□□ -0.35
RPAIN-212ENST00000573126 NPHP1O15259 732 aa12.87□□□□□ -0.35
RPAIN-212ENST00000573126 NRDCO43847 1150 aa12.87□□□□□ -0.35
RPAIN-212ENST00000573126 SYCP1Q15431 976 aa12.87□□□□□ -0.35
RPAIN-212ENST00000573126 SMIM5Q71RC9 77 aa12.87□□□□□ -0.35
RPAIN-212ENST00000573126 TRMT44Q8IYL2 757 aaKnown RBP12.87□□□□□ -0.35
RPAIN-212ENST00000573126 ENAHQ8N8S7 591 aaPredicted RBP12.87□□□□□ -0.35
RPAIN-212ENST00000573126 CDC5LQ99459 802 aaKnown RBP12.87□□□□□ -0.35
RPAIN-212ENST00000573126 MAN1B1Q9UKM7 699 aa12.87□□□□□ -0.35
RPAIN-212ENST00000573126 ARAP2Q8WZ64 1704 aa12.87□□□□□ -0.35
RPAIN-212ENST00000573126 KCNQ2O43526 872 aa12.87□□□□□ -0.35
RPAIN-212ENST00000573126 FMR1Q06787 632 aaKnown RBP eCLIP12.87□□□□□ -0.35
RPAIN-212ENST00000573126 SEC23AQ15436 765 aa12.87□□□□□ -0.35
RPAIN-212ENST00000573126 ERFEQ4G0M1 354 aa12.87□□□□□ -0.35
RPAIN-212ENST00000573126 BICDL1Q6ZP65 573 aa12.87□□□□□ -0.35
RPAIN-212ENST00000573126 DOCK2Q92608 1830 aa12.86□□□□□ -0.35
RPAIN-212ENST00000573126 TOP1P11387 765 aaKnown RBP12.86□□□□□ -0.35
RPAIN-212ENST00000573126 AKAP17AQ02040 695 aaKnown RBP12.86□□□□□ -0.35
RPAIN-212ENST00000573126 EVX2Q03828 476 aa12.86□□□□□ -0.35
RPAIN-212ENST00000573126 EARS2Q5JPH6 523 aaKnown RBP12.86□□□□□ -0.35
RPAIN-212ENST00000573126 ANKRD18AQ8IVF6 992 aa12.86□□□□□ -0.35
RPAIN-212ENST00000573126 RIOK1Q9BRS2 568 aaKnown RBP12.86□□□□□ -0.35
RPAIN-212ENST00000573126 CSRNP2Q9H175 543 aa12.86□□□□□ -0.35
RPAIN-212ENST00000573126 INTS13Q9NVM9 706 aa12.86□□□□□ -0.35
RPAIN-212ENST00000573126 COL1A1P02452 1464 aaPredicted RBP12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms