RNA–Protein interactions for RNA: ENST00000572949.5

USP6-204, Transcript of ubiquitin specific peptidase 6, humanhuman

TSL 2

Gene USP6, Length 7,862 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6-204ENST00000572949 ATP2A3Q93084 1043 aa10.52□□□□□ -0.72
USP6-204ENST00000572949 NKTRP30414 1462 aaKnown RBP10.52□□□□□ -0.72
USP6-204ENST00000572949 SORBS3O60504 671 aa10.52□□□□□ -0.73
USP6-204ENST00000572949 OSBPP22059 807 aa10.52□□□□□ -0.73
USP6-204ENST00000572949 KRT81Q14533 505 aa10.52□□□□□ -0.73
USP6-204ENST00000572949 Q3C1V9 767 aa10.52□□□□□ -0.73
USP6-204ENST00000572949 FYB2Q5VWT5 728 aa10.52□□□□□ -0.73
USP6-204ENST00000572949 CNNM4Q6P4Q7 775 aa10.52□□□□□ -0.73
USP6-204ENST00000572949 MRPS27Q92552 414 aaKnown RBP10.52□□□□□ -0.73
USP6-204ENST00000572949 TRIM56Q9BRZ2 755 aaKnown RBP10.52□□□□□ -0.73
USP6-204ENST00000572949 SYNJ1O43426 1573 aa10.52□□□□□ -0.73
USP6-204ENST00000572949 HCLS1P14317 486 aaPredicted RBP10.52□□□□□ -0.73
USP6-204ENST00000572949 PLCD1P51178 756 aa10.52□□□□□ -0.73
USP6-204ENST00000572949 MRPL44Q9H9J2 332 aaKnown RBP10.52□□□□□ -0.73
USP6-204ENST00000572949 SEPT10Q9P0V9 454 aa10.52□□□□□ -0.73
USP6-204ENST00000572949 ANAPC5Q9UJX4 755 aa10.52□□□□□ -0.73
USP6-204ENST00000572949 RBM8AQ9Y5S9 174 aaKnown RBP10.52□□□□□ -0.73
USP6-204ENST00000572949 TNNC1P63316 161 aa10.52□□□□□ -0.73
USP6-204ENST00000572949 SRRTQ9BXP5 876 aaKnown RBP10.52□□□□□ -0.73
USP6-204ENST00000572949 SETD1BQ9UPS6 1966 aaKnown RBP10.52□□□□□ -0.73
USP6-204ENST00000572949 KIF3CO14782 793 aa10.52□□□□□ -0.73
USP6-204ENST00000572949 PUM3Q15397 648 aaKnown RBP10.52□□□□□ -0.73
USP6-204ENST00000572949 TTLL7Q6ZT98 887 aa10.52□□□□□ -0.73
USP6-204ENST00000572949 ARMC9Q7Z3E5 817 aa10.52□□□□□ -0.73
USP6-204ENST00000572949 MBD4O95243 580 aa10.52□□□□□ -0.73
USP6-204ENST00000572949 RXRAP19793 462 aa10.52□□□□□ -0.73
USP6-204ENST00000572949 POLR2BP30876 1174 aaKnown RBP10.52□□□□□ -0.73
USP6-204ENST00000572949 LGSNQ5TDP6 509 aa10.52□□□□□ -0.73
USP6-204ENST00000572949 CHURC1Q8WUH1 139 aa10.52□□□□□ -0.73
USP6-204ENST00000572949 EFCAB5A4FU69 1503 aa10.52□□□□□ -0.73
USP6-204ENST00000572949 ERCC3P19447 782 aa10.51□□□□□ -0.73
USP6-204ENST00000572949 STX17P56962 302 aa10.51□□□□□ -0.73
USP6-204ENST00000572949 IGBP1P78318 339 aa10.51□□□□□ -0.73
USP6-204ENST00000572949 CDR2Q01850 454 aa10.51□□□□□ -0.73
USP6-204ENST00000572949 DACT3Q96B18 629 aaPredicted RBP10.51□□□□□ -0.73
USP6-204ENST00000572949 GUCA1BQ9UMX6 200 aa10.51□□□□□ -0.73
USP6-204ENST00000572949 MAP3K7O43318 606 aa10.51□□□□□ -0.73
USP6-204ENST00000572949 ADCY5O95622 1261 aa10.51□□□□□ -0.73
USP6-204ENST00000572949 TMCO4Q5TGY1 634 aa10.51□□□□□ -0.73
USP6-204ENST00000572949 ABCC5O15440 1437 aa10.51□□□□□ -0.73
USP6-204ENST00000572949 RARSP54136 660 aaKnown RBP10.51□□□□□ -0.73
USP6-204ENST00000572949 RBBP5Q15291 538 aaKnown RBP10.51□□□□□ -0.73
USP6-204ENST00000572949 INTS8Q75QN2 995 aaKnown RBP10.51□□□□□ -0.73
USP6-204ENST00000572949 IPO11Q9UI26 975 aaKnown RBP10.51□□□□□ -0.73
USP6-204ENST00000572949 BCRP11274 1271 aa10.51□□□□□ -0.73
USP6-204ENST00000572949 SLITRK6Q9H5Y7 841 aa10.51□□□□□ -0.73
USP6-204ENST00000572949 MBIPQ9NS73 344 aa10.51□□□□□ -0.73
USP6-204ENST00000572949 SAMD15Q9P1V8 674 aa10.51□□□□□ -0.73
USP6-204ENST00000572949 FAM8A1Q9UBU6 413 aa10.51□□□□□ -0.73
USP6-204ENST00000572949 RTL1A6NKG5 1358 aa10.51□□□□□ -0.73
USP6-204ENST00000572949 C2CD5Q86YS7 1000 aa10.51□□□□□ -0.73
USP6-204ENST00000572949 NUB1Q9Y5A7 615 aa10.51□□□□□ -0.73
USP6-204ENST00000572949 ALDH1L1O75891 902 aa10.51□□□□□ -0.73
USP6-204ENST00000572949 TBC1D22AQ8WUA7 517 aa10.51□□□□□ -0.73
USP6-204ENST00000572949 CCDC171Q6TFL3 1326 aa10.51□□□□□ -0.73
USP6-204ENST00000572949 SPTLC2O15270 562 aa10.5□□□□□ -0.73
USP6-204ENST00000572949 HEXIM1O94992 359 aaKnown RBP10.5□□□□□ -0.73
USP6-204ENST00000572949 TNNC2P02585 160 aa10.5□□□□□ -0.73
USP6-204ENST00000572949 GSTA1P08263 222 aa10.5□□□□□ -0.73
USP6-204ENST00000572949 GSTA2P09210 222 aa10.5□□□□□ -0.73
USP6-204ENST00000572949 KRT10P13645 584 aa10.5□□□□□ -0.73
USP6-204ENST00000572949 ELF1P32519 619 aa10.5□□□□□ -0.73
USP6-204ENST00000572949 PPP1R2P41236 205 aa10.5□□□□□ -0.73
USP6-204ENST00000572949 NAA25Q14CX7 972 aa10.5□□□□□ -0.73
USP6-204ENST00000572949 ZNF174Q15697 407 aa10.5□□□□□ -0.73
USP6-204ENST00000572949 CCDC24Q8N4L8 307 aa10.5□□□□□ -0.73
USP6-204ENST00000572949 PKNOX2Q96KN3 472 aa10.5□□□□□ -0.73
USP6-204ENST00000572949 PTPREP23469 700 aa10.5□□□□□ -0.73
USP6-204ENST00000572949 GKAP1Q5VSY0 366 aaPredicted RBP10.5□□□□□ -0.73
USP6-204ENST00000572949 NESP48681 1621 aa10.5□□□□□ -0.73
USP6-204ENST00000572949 ZSCAN20P17040 1043 aaPredicted RBP10.5□□□□□ -0.73
USP6-204ENST00000572949 TXKP42681 527 aa10.5□□□□□ -0.73
USP6-204ENST00000572949 TCEANC2Q96MN5 208 aa10.5□□□□□ -0.73
USP6-204ENST00000572949 APOL6Q9BWW8 343 aa10.5□□□□□ -0.73
USP6-204ENST00000572949 UTP11Q9Y3A2 253 aaKnown RBP10.5□□□□□ -0.73
USP6-204ENST00000572949 ITGA6P23229 1130 aa10.5□□□□□ -0.73
USP6-204ENST00000572949 VAV2P52735 878 aa10.5□□□□□ -0.73
USP6-204ENST00000572949 ACBD5Q5T8D3 534 aaPredicted RBP10.5□□□□□ -0.73
USP6-204ENST00000572949 N4BP2L2Q92802 583 aaPredicted RBP10.5□□□□□ -0.73
USP6-204ENST00000572949 UIMC1Q96RL1 719 aa10.5□□□□□ -0.73
USP6-204ENST00000572949 NOC4LQ9BVI4 516 aaKnown RBP10.5□□□□□ -0.73
USP6-204ENST00000572949 LUC7L2Q9Y383 392 aaKnown RBP10.5□□□□□ -0.73
USP6-204ENST00000572949 SH3TC1Q8TE82 1336 aa10.5□□□□□ -0.73
USP6-204ENST00000572949 IVLP07476 585 aa10.5□□□□□ -0.73
USP6-204ENST00000572949 SH2D4BQ5SQS7 431 aa10.5□□□□□ -0.73
USP6-204ENST00000572949 CEP85LQ5SZL2 805 aa10.5□□□□□ -0.73
USP6-204ENST00000572949 FAM102BQ5T8I3 360 aa10.5□□□□□ -0.73
USP6-204ENST00000572949 CCPG1Q9ULG6 757 aa10.5□□□□□ -0.73
USP6-204ENST00000572949 TTF2Q9UNY4 1162 aaKnown RBP10.5□□□□□ -0.73
USP6-204ENST00000572949 S100BP04271 92 aaPredicted RBP10.5□□□□□ -0.73
USP6-204ENST00000572949 MCM6Q14566 821 aa10.5□□□□□ -0.73
USP6-204ENST00000572949 ASIC2Q16515 512 aa10.5□□□□□ -0.73
USP6-204ENST00000572949 SCYL2Q6P3W7 929 aa10.5□□□□□ -0.73
USP6-204ENST00000572949 CCDC121Q6ZUS5 278 aa10.5□□□□□ -0.73
USP6-204ENST00000572949 PDZD4Q76G19 769 aaPredicted RBP10.5□□□□□ -0.73
USP6-204ENST00000572949 METTL23Q86XA0 190 aa10.5□□□□□ -0.73
USP6-204ENST00000572949 SUGCTQ9HAC7 445 aa10.5□□□□□ -0.73
USP6-204ENST00000572949 ARFGAP3Q9NP61 516 aa10.5□□□□□ -0.73
USP6-204ENST00000572949 EXOC3O60645 756 aa10.49□□□□□ -0.73
USP6-204ENST00000572949 RXRBP28702 533 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms