RNA–Protein interactions for RNA: ENST00000570475.5

USP43-202, Transcript of ubiquitin specific peptidase 43, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP43, Length 3,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-202ENST00000570475 TRIM75PA6NK02 468 aa17.47■□□□□ 0.39
USP43-202ENST00000570475 ARHGAP6O43182 974 aa17.47■□□□□ 0.39
USP43-202ENST00000570475 PCCAP05165 728 aaPredicted RBP17.47■□□□□ 0.39
USP43-202ENST00000570475 IGHMBP2P38935 993 aaKnown RBP17.47■□□□□ 0.39
USP43-202ENST00000570475 AKNAD1Q5T1N1 836 aa17.47■□□□□ 0.39
USP43-202ENST00000570475 RRAGBQ5VZM2 374 aa17.47■□□□□ 0.39
USP43-202ENST00000570475 LCORLQ8N3X6 602 aa17.47■□□□□ 0.39
USP43-202ENST00000570475 MORC2Q9Y6X9 1032 aaPredicted RBP17.47■□□□□ 0.39
USP43-202ENST00000570475 TNNT3P45378 269 aaPredicted RBP17.47■□□□□ 0.39
USP43-202ENST00000570475 FAM193AP78312 1265 aa17.47■□□□□ 0.39
USP43-202ENST00000570475 VSTM4Q8IW00 320 aa17.47■□□□□ 0.39
USP43-202ENST00000570475 BRMS1Q9HCU9 246 aa17.47■□□□□ 0.39
USP43-202ENST00000570475 PNMA6AP0CW24 399 aaPredicted RBP17.46■□□□□ 0.39
USP43-202ENST00000570475 MCM7P33993 719 aa17.46■□□□□ 0.39
USP43-202ENST00000570475 TSR1Q2NL82 804 aaKnown RBP17.46■□□□□ 0.39
USP43-202ENST00000570475 SMIM22K7EJ46 135 aa17.46■□□□□ 0.39
USP43-202ENST00000570475 FOXP2O15409 715 aa17.46■□□□□ 0.39
USP43-202ENST00000570475 TEX33O43247 280 aa17.46■□□□□ 0.39
USP43-202ENST00000570475 UQCRFS1P1P0C7P4 283 aa17.46■□□□□ 0.39
USP43-202ENST00000570475 PIGBQ92521 554 aa17.46■□□□□ 0.39
USP43-202ENST00000570475 STRBPQ96SI9 672 aaKnown RBP17.46■□□□□ 0.39
USP43-202ENST00000570475 CCDC196A0A1B0GTZ2 297 aa17.46■□□□□ 0.38
USP43-202ENST00000570475 ERCC3P19447 782 aa17.46■□□□□ 0.38
USP43-202ENST00000570475 NLRP5P59047 1200 aa17.46■□□□□ 0.38
USP43-202ENST00000570475 NUTM2AQ8IVF1 878 aaPredicted RBP17.46■□□□□ 0.38
USP43-202ENST00000570475 ANKRD20A12PQ8NF67 263 aa17.46■□□□□ 0.38
USP43-202ENST00000570475 KRT23Q9C075 422 aa17.46■□□□□ 0.38
USP43-202ENST00000570475 NALCNQ8IZF0 1738 aa17.46■□□□□ 0.38
USP43-202ENST00000570475 PATL2C9JE40 543 aaKnown RBP17.45■□□□□ 0.38
USP43-202ENST00000570475 IKBKBO14920 756 aa17.45■□□□□ 0.38
USP43-202ENST00000570475 GPS2Q13227 327 aa17.45■□□□□ 0.38
USP43-202ENST00000570475 RASGRF1Q13972 1273 aa17.45■□□□□ 0.38
USP43-202ENST00000570475 SYCP1Q15431 976 aa17.45■□□□□ 0.38
USP43-202ENST00000570475 NLRP10Q86W26 655 aa17.45■□□□□ 0.38
USP43-202ENST00000570475 CTNND2Q9UQB3 1225 aa17.45■□□□□ 0.38
USP43-202ENST00000570475 RGPD2P0DJD1 1756 aa17.45■□□□□ 0.38
USP43-202ENST00000570475 CCDC175P0C221 793 aa17.45■□□□□ 0.38
USP43-202ENST00000570475 GDAP1L1Q96MZ0 367 aa17.45■□□□□ 0.38
USP43-202ENST00000570475 LY9Q9HBG7 655 aa17.45■□□□□ 0.38
USP43-202ENST00000570475 CEP131Q9UPN4 1083 aa17.45■□□□□ 0.38
USP43-202ENST00000570475 ERVV-2B6SEH9 535 aa17.44■□□□□ 0.38
USP43-202ENST00000570475 AKR1B15C9JRZ8 316 aaPredicted RBP17.44■□□□□ 0.38
USP43-202ENST00000570475 SLFN14P0C7P3 912 aa17.44■□□□□ 0.38
USP43-202ENST00000570475 PUM3Q15397 648 aaKnown RBP17.44■□□□□ 0.38
USP43-202ENST00000570475 ZNF654Q8IZM8 581 aa17.44■□□□□ 0.38
USP43-202ENST00000570475 ZNF446Q9NWS9 450 aa17.44■□□□□ 0.38
USP43-202ENST00000570475 IFIT1BQ5T764 474 aaKnown RBP17.44■□□□□ 0.38
USP43-202ENST00000570475 JAKMIP3Q5VZ66 844 aa17.44■□□□□ 0.38
USP43-202ENST00000570475 RESP18Q5W5W9 173 aa17.44■□□□□ 0.38
USP43-202ENST00000570475 OAS2P29728 719 aaKnown RBP17.44■□□□□ 0.38
USP43-202ENST00000570475 RILPL1Q5EBL4 403 aa17.44■□□□□ 0.38
USP43-202ENST00000570475 TOPAZ1Q8N9V7 1692 aa17.44■□□□□ 0.38
USP43-202ENST00000570475 PPP6R2O75170 966 aa17.43■□□□□ 0.38
USP43-202ENST00000570475 GYG1P46976 350 aa17.43■□□□□ 0.38
USP43-202ENST00000570475 GIGYF2Q6Y7W6 1299 aaKnown RBP17.43■□□□□ 0.38
USP43-202ENST00000570475 FANCBQ8NB91 859 aa17.43■□□□□ 0.38
USP43-202ENST00000570475 ISCA1Q9BUE6 129 aa17.43■□□□□ 0.38
USP43-202ENST00000570475 TAB2Q9NYJ8 693 aa17.43■□□□□ 0.38
USP43-202ENST00000570475 GUCA1BQ9UMX6 200 aa17.43■□□□□ 0.38
USP43-202ENST00000570475 LTN1O94822 1766 aa17.43■□□□□ 0.38
USP43-202ENST00000570475 VGLL3A8MV65 326 aa17.43■□□□□ 0.38
USP43-202ENST00000570475 TFRCP02786 760 aaKnown RBP17.43■□□□□ 0.38
USP43-202ENST00000570475 FAM47AQ5JRC9 791 aa17.43■□□□□ 0.38
USP43-202ENST00000570475 WWC2Q6AWC2 1192 aa17.43■□□□□ 0.38
USP43-202ENST00000570475 CATIPQ7Z7H3 387 aa17.43■□□□□ 0.38
USP43-202ENST00000570475 KLHL34Q8N239 644 aa17.43■□□□□ 0.38
USP43-202ENST00000570475 RIPOR2Q9Y4F9 1068 aa17.43■□□□□ 0.38
USP43-202ENST00000570475 PIK3AP1Q6ZUJ8 805 aa17.43■□□□□ 0.38
USP43-202ENST00000570475 LPIN2Q92539 896 aa17.43■□□□□ 0.38
USP43-202ENST00000570475 CNNM2Q9H8M5 875 aa17.43■□□□□ 0.38
USP43-202ENST00000570475 BTG4Q9NY30 223 aa17.43■□□□□ 0.38
USP43-202ENST00000570475 SLIT1O75093 1534 aa17.42■□□□□ 0.38
USP43-202ENST00000570475 IGDCC4Q8TDY8 1250 aa17.42■□□□□ 0.38
USP43-202ENST00000570475 TIGD1Q96MW7 591 aa17.42■□□□□ 0.38
USP43-202ENST00000570475 NBPF3Q9H094 633 aa17.42■□□□□ 0.38
USP43-202ENST00000570475 RFX7Q2KHR2 1363 aa17.42■□□□□ 0.38
USP43-202ENST00000570475 PDE8AO60658 829 aa17.42■□□□□ 0.38
USP43-202ENST00000570475 RBL2Q08999 1139 aa17.42■□□□□ 0.38
USP43-202ENST00000570475 IQCA1Q86XH1 822 aa17.42■□□□□ 0.38
USP43-202ENST00000570475 CAGE1Q8TC20 777 aa17.42■□□□□ 0.38
USP43-202ENST00000570475 CAPZA3Q96KX2 299 aa17.42■□□□□ 0.38
USP43-202ENST00000570475 SLF1Q9BQI6 1058 aa17.42■□□□□ 0.38
USP43-202ENST00000570475 NIP7Q9Y221 180 aaKnown RBP eCLIP17.42■□□□□ 0.38
USP43-202ENST00000570475 TNKSO95271 1327 aa17.42■□□□□ 0.38
USP43-202ENST00000570475 DEXIO95424 95 aa17.42■□□□□ 0.38
USP43-202ENST00000570475 MMP1P03956 469 aa17.42■□□□□ 0.38
USP43-202ENST00000570475 CASP14P31944 242 aa17.42■□□□□ 0.38
USP43-202ENST00000570475 PTPAQ15257 358 aa17.42■□□□□ 0.38
USP43-202ENST00000570475 UBE3CQ15386 1083 aa17.42■□□□□ 0.38
USP43-202ENST00000570475 HSP90B2PQ58FF3 399 aa17.42■□□□□ 0.38
USP43-202ENST00000570475 MLKLQ8NB16 471 aa17.42■□□□□ 0.38
USP43-202ENST00000570475 ESR2Q92731 530 aa17.42■□□□□ 0.38
USP43-202ENST00000570475 DNA2P51530 1060 aa17.41■□□□□ 0.38
USP43-202ENST00000570475 KCNQ4P56696 695 aa17.41■□□□□ 0.38
USP43-202ENST00000570475 ACRBPQ8NEB7 543 aa17.41■□□□□ 0.38
USP43-202ENST00000570475 GOLGA1Q92805 767 aa17.41■□□□□ 0.38
USP43-202ENST00000570475 EPB41L4AQ9HCS5 686 aaPredicted RBP17.41■□□□□ 0.38
USP43-202ENST00000570475 ARHGAP23Q9P227 1491 aa17.41■□□□□ 0.38
USP43-202ENST00000570475 A0A0U1RQJ8 604 aa17.41■□□□□ 0.38
USP43-202ENST00000570475 BMP6P22004 513 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms