RNA–Protein interactions for RNA: ENST00000570231.1

THUMPD1-205, Transcript of THUMP domain containing 1, humanhuman

TSL 2

Gene THUMPD1, Length 1,040 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1-205ENST00000570231 SSH3Q8TE77 659 aa8.57□□□□□ -1.04
THUMPD1-205ENST00000570231 PLA2G12BQ9BX93 195 aa8.57□□□□□ -1.04
THUMPD1-205ENST00000570231 SEC31BQ9NQW1 1179 aa8.57□□□□□ -1.04
THUMPD1-205ENST00000570231 CUEDC1Q9NWM3 386 aaPredicted RBP8.57□□□□□ -1.04
THUMPD1-205ENST00000570231 CEP126Q9P2H0 1117 aa8.57□□□□□ -1.04
THUMPD1-205ENST00000570231 AFDNP55196 1824 aaKnown RBP8.57□□□□□ -1.04
THUMPD1-205ENST00000570231 TUBGCP6Q96RT7 1819 aa8.57□□□□□ -1.04
THUMPD1-205ENST00000570231 ANKRD36CQ5JPF3 1778 aa8.56□□□□□ -1.04
THUMPD1-205ENST00000570231 ANKRD18BA2A2Z9 1011 aa8.56□□□□□ -1.04
THUMPD1-205ENST00000570231 HSP90B1P14625 803 aaKnown RBP8.56□□□□□ -1.04
THUMPD1-205ENST00000570231 RFX5P48382 616 aaPredicted RBP8.56□□□□□ -1.04
THUMPD1-205ENST00000570231 CCDC152Q4G0S7 254 aa8.56□□□□□ -1.04
THUMPD1-205ENST00000570231 SCARF2Q96GP6 870 aaPredicted RBP8.56□□□□□ -1.04
THUMPD1-205ENST00000570231 LNPKQ9C0E8 428 aa8.56□□□□□ -1.04
THUMPD1-205ENST00000570231 DCTPP1Q9H773 170 aa8.56□□□□□ -1.04
THUMPD1-205ENST00000570231 TIMMDC1Q9NPL8 285 aa8.56□□□□□ -1.04
THUMPD1-205ENST00000570231 NSFL1CQ9UNZ2 370 aaKnown RBP8.56□□□□□ -1.04
THUMPD1-205ENST00000570231 CACNA1FO60840 1977 aa8.55□□□□□ -1.04
THUMPD1-205ENST00000570231 GPR37L1O60883 481 aa8.55□□□□□ -1.04
THUMPD1-205ENST00000570231 GDF11O95390 407 aa8.55□□□□□ -1.04
THUMPD1-205ENST00000570231 CSF1RP07333 972 aa8.55□□□□□ -1.04
THUMPD1-205ENST00000570231 RGS3P49796 1198 aa8.55□□□□□ -1.04
THUMPD1-205ENST00000570231 RASSF7Q02833 373 aa8.55□□□□□ -1.04
THUMPD1-205ENST00000570231 PTPN12Q05209 780 aaKnown RBP8.55□□□□□ -1.04
THUMPD1-205ENST00000570231 G3BP1Q13283 466 aaKnown RBP eCLIP8.55□□□□□ -1.04
THUMPD1-205ENST00000570231 SMC5Q8IY18 1101 aa8.55□□□□□ -1.04
THUMPD1-205ENST00000570231 WHAMMQ8TF30 809 aa8.55□□□□□ -1.04
THUMPD1-205ENST00000570231 GCC1Q96CN9 775 aa8.55□□□□□ -1.04
THUMPD1-205ENST00000570231 ESYT1Q9BSJ8 1104 aa8.55□□□□□ -1.04
THUMPD1-205ENST00000570231 PUS3Q9BZE2 481 aaKnown RBP8.55□□□□□ -1.04
THUMPD1-205ENST00000570231 IL1RAPL2Q9NP60 686 aa8.55□□□□□ -1.04
THUMPD1-205ENST00000570231 COL24A1Q17RW2 1714 aa8.54□□□□□ -1.04
THUMPD1-205ENST00000570231 NUP98P52948 1817 aa8.54□□□□□ -1.04
THUMPD1-205ENST00000570231 ARHGEF15O94989 841 aa8.54□□□□□ -1.04
THUMPD1-205ENST00000570231 SLFNL1Q499Z3 407 aa8.54□□□□□ -1.04
THUMPD1-205ENST00000570231 LRRC24Q50LG9 513 aa8.54□□□□□ -1.04
THUMPD1-205ENST00000570231 SLC10A5Q5PT55 438 aa8.54□□□□□ -1.04
THUMPD1-205ENST00000570231 CHD1LQ86WJ1 897 aa8.54□□□□□ -1.04
THUMPD1-205ENST00000570231 RPGRQ92834 1020 aaKnown RBP8.54□□□□□ -1.04
THUMPD1-205ENST00000570231 CNKSR1Q969H4 720 aa8.54□□□□□ -1.04
THUMPD1-205ENST00000570231 LRRCC1Q9C099 1032 aa8.54□□□□□ -1.04
THUMPD1-205ENST00000570231 CNNM1Q9NRU3 951 aa8.54□□□□□ -1.04
THUMPD1-205ENST00000570231 PPP1R1BQ9UD71 204 aaPredicted RBP8.54□□□□□ -1.04
THUMPD1-205ENST00000570231 TNRC6CQ9HCJ0 1690 aaKnown RBP8.53□□□□□ -1.04
THUMPD1-205ENST00000570231 RAB11FIP3O75154 756 aa8.53□□□□□ -1.04
THUMPD1-205ENST00000570231 F11P03951 625 aa8.53□□□□□ -1.04
THUMPD1-205ENST00000570231 POLD1P28340 1107 aa8.53□□□□□ -1.04
THUMPD1-205ENST00000570231 IGHMBP2P38935 993 aaKnown RBP8.53□□□□□ -1.04
THUMPD1-205ENST00000570231 NUCB1Q02818 461 aa8.53□□□□□ -1.04
THUMPD1-205ENST00000570231 TFCP2Q12800 502 aa8.53□□□□□ -1.04
THUMPD1-205ENST00000570231 USP4Q13107 963 aa8.53□□□□□ -1.04
THUMPD1-205ENST00000570231 GAS6Q14393 721 aa8.53□□□□□ -1.04
THUMPD1-205ENST00000570231 SF3B3Q15393 1217 aaKnown RBP8.53□□□□□ -1.04
THUMPD1-205ENST00000570231 DBN1Q16643 649 aa8.53□□□□□ -1.04
THUMPD1-205ENST00000570231 HSP90AB4PQ58FF6 505 aa8.53□□□□□ -1.04
THUMPD1-205ENST00000570231 GNASQ5JWF2 1037 aa8.53□□□□□ -1.04
THUMPD1-205ENST00000570231 KANK3Q6NY19 840 aa8.53□□□□□ -1.04
THUMPD1-205ENST00000570231 LDHAL6AQ6ZMR3 332 aa8.53□□□□□ -1.04
THUMPD1-205ENST00000570231 DDX46Q7L014 1031 aaKnown RBP8.53□□□□□ -1.04
THUMPD1-205ENST00000570231 SLC51AQ86UW1 340 aa8.53□□□□□ -1.04
THUMPD1-205ENST00000570231 ANKRD18AQ8IVF6 992 aa8.53□□□□□ -1.04
THUMPD1-205ENST00000570231 C16orf71Q8IYS4 520 aaPredicted RBP8.53□□□□□ -1.04
THUMPD1-205ENST00000570231 RHPN1Q8TCX5 695 aa8.53□□□□□ -1.04
THUMPD1-205ENST00000570231 CELF1Q92879 486 aaKnown RBP8.53□□□□□ -1.04
THUMPD1-205ENST00000570231 GTPBP3Q969Y2 492 aaKnown RBP8.53□□□□□ -1.04
THUMPD1-205ENST00000570231 ZSCAN10Q96SZ4 725 aaPredicted RBP8.53□□□□□ -1.04
THUMPD1-205ENST00000570231 CDC5LQ99459 802 aaKnown RBP8.53□□□□□ -1.04
THUMPD1-205ENST00000570231 MTFR1LQ9H019 292 aa8.53□□□□□ -1.04
THUMPD1-205ENST00000570231 COPRSQ9NQ92 184 aa8.53□□□□□ -1.04
THUMPD1-205ENST00000570231 RAB6BQ9NRW1 208 aa8.53□□□□□ -1.04
THUMPD1-205ENST00000570231 DOLKQ9UPQ8 538 aa8.53□□□□□ -1.04
THUMPD1-205ENST00000570231 NOP58Q9Y2X3 529 aaKnown RBP8.53□□□□□ -1.04
THUMPD1-205ENST00000570231 GPR25O00155 361 aa8.52□□□□□ -1.05
THUMPD1-205ENST00000570231 EYA2O00167 538 aa8.52□□□□□ -1.05
THUMPD1-205ENST00000570231 SASH1O94885 1247 aa8.52□□□□□ -1.05
THUMPD1-205ENST00000570231 CELA2BP08218 269 aaPredicted RBP8.52□□□□□ -1.05
THUMPD1-205ENST00000570231 CHRNA5P30532 468 aa8.52□□□□□ -1.05
THUMPD1-205ENST00000570231 PDE6BP35913 854 aa8.52□□□□□ -1.05
THUMPD1-205ENST00000570231 METTL24Q5JXM2 366 aa8.52□□□□□ -1.05
THUMPD1-205ENST00000570231 LYPD4Q6UWN0 246 aa8.52□□□□□ -1.05
THUMPD1-205ENST00000570231 ATG9AQ7Z3C6 839 aa8.52□□□□□ -1.05
THUMPD1-205ENST00000570231 C2CD5Q86YS7 1000 aa8.52□□□□□ -1.05
THUMPD1-205ENST00000570231 ERC1Q8IUD2 1116 aa8.52□□□□□ -1.05
THUMPD1-205ENST00000570231 KCTD17Q8N5Z5 321 aa8.52□□□□□ -1.05
THUMPD1-205ENST00000570231 OTUD7AQ8TE49 926 aaPredicted RBP8.52□□□□□ -1.05
THUMPD1-205ENST00000570231 ZNF622Q969S3 477 aaKnown RBP eCLIP8.52□□□□□ -1.05
THUMPD1-205ENST00000570231 KIF1BPQ96EK5 621 aa8.52□□□□□ -1.05
THUMPD1-205ENST00000570231 MPHOSPH8Q99549 860 aa8.52□□□□□ -1.05
THUMPD1-205ENST00000570231 BRIP1Q9BX63 1249 aa8.52□□□□□ -1.05
THUMPD1-205ENST00000570231 NUCKS1Q9H1E3 243 aaKnown RBP8.52□□□□□ -1.05
THUMPD1-205ENST00000570231 WWC3Q9ULE0 1092 aa8.52□□□□□ -1.05
THUMPD1-205ENST00000570231 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.52□□□□□ -1.05
THUMPD1-205ENST00000570231 RTL9Q8NET4 1388 aa8.51□□□□□ -1.05
THUMPD1-205ENST00000570231 COL4A1P02462 1669 aa8.51□□□□□ -1.05
THUMPD1-205ENST00000570231 IL15P40933 162 aaPredicted RBP8.51□□□□□ -1.05
THUMPD1-205ENST00000570231 CENPCQ03188 943 aa8.51□□□□□ -1.05
THUMPD1-205ENST00000570231 TSHZ3Q63HK5 1081 aa8.51□□□□□ -1.05
THUMPD1-205ENST00000570231 TMEM214Q6NUQ4 689 aaKnown RBP8.51□□□□□ -1.05
THUMPD1-205ENST00000570231 AACSQ86V21 672 aa8.51□□□□□ -1.05
THUMPD1-205ENST00000570231 RNF135Q8IUD6 432 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms