RNA–Protein interactions for RNA: ENST00000569476.2

LINC00559-201, long intergenic non-protein coding RNA 559, humanhuman

TSL 1 (best) BASIC

Gene LINC00559, Length 3,867 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00559-201ENST00000569476 SETDB2Q96T68 719 aa9.08□□□□□ -0.96
LINC00559-201ENST00000569476 LZTS2Q9BRK4 669 aa9.08□□□□□ -0.96
LINC00559-201ENST00000569476 ARMT1Q9H993 441 aa9.08□□□□□ -0.96
LINC00559-201ENST00000569476 RGPD3A6NKT7 1758 aaPredicted RBP9.08□□□□□ -0.96
LINC00559-201ENST00000569476 RGPD4Q7Z3J3 1758 aa9.08□□□□□ -0.96
LINC00559-201ENST00000569476 LDHCP07864 332 aa9.08□□□□□ -0.96
LINC00559-201ENST00000569476 RPS8P62241 208 aaKnown RBP9.08□□□□□ -0.96
LINC00559-201ENST00000569476 CHAF1AQ13111 956 aaPredicted RBP9.08□□□□□ -0.96
LINC00559-201ENST00000569476 ERFEQ4G0M1 354 aa9.08□□□□□ -0.96
LINC00559-201ENST00000569476 PI16Q6UXB8 463 aa9.08□□□□□ -0.96
LINC00559-201ENST00000569476 KRI1Q8N9T8 703 aaKnown RBP9.08□□□□□ -0.96
LINC00559-201ENST00000569476 MYRIPQ8NFW9 859 aa9.08□□□□□ -0.96
LINC00559-201ENST00000569476 SEC31BQ9NQW1 1179 aa9.08□□□□□ -0.96
LINC00559-201ENST00000569476 ZSWIM5Q9P217 1185 aa9.08□□□□□ -0.96
LINC00559-201ENST00000569476 CCDC9Q9Y3X0 531 aaKnown RBP9.08□□□□□ -0.96
LINC00559-201ENST00000569476 NRXN2Q9P2S2 1712 aa9.08□□□□□ -0.96
LINC00559-201ENST00000569476 BECN2A8MW95 431 aa9.08□□□□□ -0.96
LINC00559-201ENST00000569476 SMARCA1P28370 1054 aa9.08□□□□□ -0.96
LINC00559-201ENST00000569476 GNAQP50148 359 aa9.08□□□□□ -0.96
LINC00559-201ENST00000569476 PPP4CP60510 307 aa9.08□□□□□ -0.96
LINC00559-201ENST00000569476 CATIPQ7Z7H3 387 aa9.08□□□□□ -0.96
LINC00559-201ENST00000569476 IQCA1Q86XH1 822 aa9.08□□□□□ -0.96
LINC00559-201ENST00000569476 FERMT2Q96AC1 680 aa9.08□□□□□ -0.96
LINC00559-201ENST00000569476 ZSCAN10Q96SZ4 725 aaPredicted RBP9.08□□□□□ -0.96
LINC00559-201ENST00000569476 UBR3Q6ZT12 1888 aa9.07□□□□□ -0.96
LINC00559-201ENST00000569476 A0A0G2JLW4 131 aa9.07□□□□□ -0.96
LINC00559-201ENST00000569476 ZPR1O75312 459 aa9.07□□□□□ -0.96
LINC00559-201ENST00000569476 PRKCSHP14314 528 aaPredicted RBP9.07□□□□□ -0.96
LINC00559-201ENST00000569476 GNL2Q13823 731 aaKnown RBP9.07□□□□□ -0.96
LINC00559-201ENST00000569476 DHX40Q8IX18 779 aaKnown RBP9.07□□□□□ -0.96
LINC00559-201ENST00000569476 ZNF654Q8IZM8 581 aa9.07□□□□□ -0.96
LINC00559-201ENST00000569476 FANCBQ8NB91 859 aa9.07□□□□□ -0.96
LINC00559-201ENST00000569476 ZNF287Q9HBT7 754 aa9.07□□□□□ -0.96
LINC00559-201ENST00000569476 NAP1L2Q9ULW6 460 aaPredicted RBP9.07□□□□□ -0.96
LINC00559-201ENST00000569476 FOCADQ5VW36 1801 aa9.07□□□□□ -0.96
LINC00559-201ENST00000569476 BCAMP50895 628 aa9.07□□□□□ -0.96
LINC00559-201ENST00000569476 FAM173BQ6P4H8 233 aa9.07□□□□□ -0.96
LINC00559-201ENST00000569476 FCHSD1Q86WN1 690 aa9.07□□□□□ -0.96
LINC00559-201ENST00000569476 SLF2Q8IX21 1173 aa9.07□□□□□ -0.96
LINC00559-201ENST00000569476 FAM84BQ96KN1 310 aaPredicted RBP9.07□□□□□ -0.96
LINC00559-201ENST00000569476 BCL2L12Q9HB09 334 aa9.07□□□□□ -0.96
LINC00559-201ENST00000569476 RTCBQ9Y3I0 505 aaKnown RBP9.07□□□□□ -0.96
LINC00559-201ENST00000569476 CLIC4Q9Y696 253 aa9.07□□□□□ -0.96
LINC00559-201ENST00000569476 ZNF202O95125 648 aa9.07□□□□□ -0.96
LINC00559-201ENST00000569476 PTPREP23469 700 aa9.07□□□□□ -0.96
LINC00559-201ENST00000569476 CDC27P30260 824 aa9.07□□□□□ -0.96
LINC00559-201ENST00000569476 HIBADHP31937 336 aaKnown RBP9.07□□□□□ -0.96
LINC00559-201ENST00000569476 AKAP17AQ02040 695 aaKnown RBP9.07□□□□□ -0.96
LINC00559-201ENST00000569476 SLFNL1Q499Z3 407 aa9.07□□□□□ -0.96
LINC00559-201ENST00000569476 SLC27A3Q5K4L6 730 aa9.07□□□□□ -0.96
LINC00559-201ENST00000569476 CCDC85AQ96PX6 553 aaPredicted RBP9.07□□□□□ -0.96
LINC00559-201ENST00000569476 TRIM5Q9C035 493 aa9.07□□□□□ -0.96
LINC00559-201ENST00000569476 SUGT1Q9Y2Z0 365 aa9.07□□□□□ -0.96
LINC00559-201ENST00000569476 SRPRBQ9Y5M8 271 aaKnown RBP9.07□□□□□ -0.96
LINC00559-201ENST00000569476 MYH6P13533 1939 aa9.07□□□□□ -0.96
LINC00559-201ENST00000569476 LTBP1Q14766 1721 aa9.07□□□□□ -0.96
LINC00559-201ENST00000569476 KIF28PB7ZC32 967 aa9.06□□□□□ -0.96
LINC00559-201ENST00000569476 RANBP6O60518 1105 aaKnown RBP9.06□□□□□ -0.96
LINC00559-201ENST00000569476 PFKFB1P16118 471 aa9.06□□□□□ -0.96
LINC00559-201ENST00000569476 PLCG2P16885 1265 aa9.06□□□□□ -0.96
LINC00559-201ENST00000569476 SYKP43405 635 aa9.06□□□□□ -0.96
LINC00559-201ENST00000569476 AMOTL1Q8IY63 956 aa9.06□□□□□ -0.96
LINC00559-201ENST00000569476 CCDC112Q8NEF3 446 aa9.06□□□□□ -0.96
LINC00559-201ENST00000569476 SDF4Q9BRK5 362 aa9.06□□□□□ -0.96
LINC00559-201ENST00000569476 DNAJC25Q9H1X3 360 aa9.06□□□□□ -0.96
LINC00559-201ENST00000569476 AATFQ9NY61 560 aaKnown RBP eCLIP9.06□□□□□ -0.96
LINC00559-201ENST00000569476 PAXBP1Q9Y5B6 917 aa9.06□□□□□ -0.96
LINC00559-201ENST00000569476 hCG_1984214I3L0E3 225 aa9.06□□□□□ -0.96
LINC00559-201ENST00000569476 KIF5BP33176 963 aa9.06□□□□□ -0.96
LINC00559-201ENST00000569476 PDE4BQ07343 736 aa9.06□□□□□ -0.96
LINC00559-201ENST00000569476 GRAPQ13588 217 aa9.06□□□□□ -0.96
LINC00559-201ENST00000569476 CAMK4Q16566 473 aa9.06□□□□□ -0.96
LINC00559-201ENST00000569476 CKAP2LQ8IYA6 745 aa9.06□□□□□ -0.96
LINC00559-201ENST00000569476 ZNF713Q8N859 430 aaPredicted RBP9.06□□□□□ -0.96
LINC00559-201ENST00000569476 GRAPLQ8TC17 118 aaPredicted RBP9.06□□□□□ -0.96
LINC00559-201ENST00000569476 NSUN4Q96CB9 384 aaKnown RBP9.06□□□□□ -0.96
LINC00559-201ENST00000569476 RAI14Q9P0K7 980 aa9.06□□□□□ -0.96
LINC00559-201ENST00000569476 PPP4R3BQ5MIZ7 849 aa9.06□□□□□ -0.96
LINC00559-201ENST00000569476 DAGLBQ8NCG7 672 aa9.06□□□□□ -0.96
LINC00559-201ENST00000569476 CLIP2Q9UDT6 1046 aa9.06□□□□□ -0.96
LINC00559-201ENST00000569476 XDHP47989 1333 aa9.06□□□□□ -0.96
LINC00559-201ENST00000569476 ADAMTS2O95450 1211 aa9.05□□□□□ -0.96
LINC00559-201ENST00000569476 CALML3P27482 149 aa9.05□□□□□ -0.96
LINC00559-201ENST00000569476 NDUFA8P51970 172 aa9.05□□□□□ -0.96
LINC00559-201ENST00000569476 OLFM4Q6UX06 510 aa9.05□□□□□ -0.96
LINC00559-201ENST00000569476 ZNF804AQ7Z570 1209 aa9.05□□□□□ -0.96
LINC00559-201ENST00000569476 LUZP1Q86V48 1076 aa9.05□□□□□ -0.96
LINC00559-201ENST00000569476 DGKHQ86XP1 1220 aa9.05□□□□□ -0.96
LINC00559-201ENST00000569476 MLKLQ8NB16 471 aa9.05□□□□□ -0.96
LINC00559-201ENST00000569476 PHF20Q9BVI0 1012 aa9.05□□□□□ -0.96
LINC00559-201ENST00000569476 AP5Z1O43299 807 aa9.05□□□□□ -0.96
LINC00559-201ENST00000569476 ATP2B4P23634 1241 aa9.05□□□□□ -0.96
LINC00559-201ENST00000569476 KRT2P35908 639 aa9.05□□□□□ -0.96
LINC00559-201ENST00000569476 KRBA2Q6ZNG9 492 aa9.05□□□□□ -0.96
LINC00559-201ENST00000569476 COL4A1P02462 1669 aa9.05□□□□□ -0.96
LINC00559-201ENST00000569476 MYO3BQ8WXR4 1341 aa9.05□□□□□ -0.96
LINC00559-201ENST00000569476 CHST3Q7LGC8 479 aa9.05□□□□□ -0.96
LINC00559-201ENST00000569476 NBPF5PQ86XG9 351 aaPredicted RBP9.05□□□□□ -0.96
LINC00559-201ENST00000569476 ACSBG1Q96GR2 724 aa9.05□□□□□ -0.96
LINC00559-201ENST00000569476 SLC26A6Q9BXS9 759 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms