RNA–Protein interactions for RNA: ENST00000569136.5

CAPN3-219, Transcript of calpain 3, humanhuman

TSL 2 BASIC

Gene CAPN3, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-219ENST00000569136 APBB1O00213 710 aa11.34□□□□□ -0.59
CAPN3-219ENST00000569136 MVPQ14764 893 aaKnown RBP11.34□□□□□ -0.59
CAPN3-219ENST00000569136 ATP2B3Q16720 1220 aa11.34□□□□□ -0.59
CAPN3-219ENST00000569136 PTCRAQ6ISU1 281 aaPredicted RBP11.34□□□□□ -0.59
CAPN3-219ENST00000569136 KRT26Q7Z3Y9 468 aa11.34□□□□□ -0.59
CAPN3-219ENST00000569136 USP48Q86UV5 1035 aa11.34□□□□□ -0.59
CAPN3-219ENST00000569136 RPAP2Q8IXW5 612 aaPredicted RBP11.34□□□□□ -0.59
CAPN3-219ENST00000569136 MTMR14Q8NCE2 650 aa11.34□□□□□ -0.59
CAPN3-219ENST00000569136 UNC93B1Q9H1C4 597 aa11.34□□□□□ -0.59
CAPN3-219ENST00000569136 PA2G4Q9UQ80 394 aaKnown RBP11.34□□□□□ -0.59
CAPN3-219ENST00000569136 F12P00748 615 aaPredicted RBP11.33□□□□□ -0.6
CAPN3-219ENST00000569136 DLGAP5Q15398 846 aa11.33□□□□□ -0.6
CAPN3-219ENST00000569136 MFSD14BQ5SR56 506 aa11.33□□□□□ -0.6
CAPN3-219ENST00000569136 KIAA0825Q8IV33 1275 aa11.33□□□□□ -0.6
CAPN3-219ENST00000569136 WDR66Q8TBY9 1149 aa11.33□□□□□ -0.6
CAPN3-219ENST00000569136 KLRG1Q96E93 195 aa11.33□□□□□ -0.6
CAPN3-219ENST00000569136 MXD3Q9BW11 206 aa11.33□□□□□ -0.6
CAPN3-219ENST00000569136 NOP58Q9Y2X3 529 aaKnown RBP11.33□□□□□ -0.6
CAPN3-219ENST00000569136 PITPNM2Q9BZ72 1349 aa11.33□□□□□ -0.6
CAPN3-219ENST00000569136 LAMB2P55268 1798 aa11.32□□□□□ -0.6
CAPN3-219ENST00000569136 PNMA6EA0A0J9YXQ4 647 aa11.32□□□□□ -0.6
CAPN3-219ENST00000569136 MYO1BO43795 1136 aa11.32□□□□□ -0.6
CAPN3-219ENST00000569136 HMMRO75330 724 aa11.32□□□□□ -0.6
CAPN3-219ENST00000569136 SURF6O75683 361 aaKnown RBP11.32□□□□□ -0.6
CAPN3-219ENST00000569136 SLC19A1P41440 591 aa11.32□□□□□ -0.6
CAPN3-219ENST00000569136 HDLBPQ00341 1268 aaKnown RBP11.32□□□□□ -0.6
CAPN3-219ENST00000569136 MCM6Q14566 821 aa11.32□□□□□ -0.6
CAPN3-219ENST00000569136 HSP90AB4PQ58FF6 505 aa11.32□□□□□ -0.6
CAPN3-219ENST00000569136 EPS8L1Q8TE68 723 aa11.32□□□□□ -0.6
CAPN3-219ENST00000569136 GLIS2Q9BZE0 524 aaPredicted RBP11.32□□□□□ -0.6
CAPN3-219ENST00000569136 GPR108Q9NPR9 543 aa11.32□□□□□ -0.6
CAPN3-219ENST00000569136 ZBTB40Q9NUA8 1239 aa11.32□□□□□ -0.6
CAPN3-219ENST00000569136 SERPINA10Q9UK55 444 aa11.32□□□□□ -0.6
CAPN3-219ENST00000569136 DENND2AQ9ULE3 1009 aa11.32□□□□□ -0.6
CAPN3-219ENST00000569136 COL4A1P02462 1669 aa11.32□□□□□ -0.6
CAPN3-219ENST00000569136 CEP350Q5VT06 3117 aa11.32□□□□□ -0.6
CAPN3-219ENST00000569136 CCDC88AQ3V6T2 1871 aa11.32□□□□□ -0.6
CAPN3-219ENST00000569136 SCN4AP35499 1836 aa11.31□□□□□ -0.6
CAPN3-219ENST00000569136 WNT10BO00744 389 aa11.31□□□□□ -0.6
CAPN3-219ENST00000569136 CELF2O95319 508 aaKnown RBP11.31□□□□□ -0.6
CAPN3-219ENST00000569136 EGFRP00533 1210 aa11.31□□□□□ -0.6
CAPN3-219ENST00000569136 TIMM10P62072 90 aa11.31□□□□□ -0.6
CAPN3-219ENST00000569136 TFCP2Q12800 502 aa11.31□□□□□ -0.6
CAPN3-219ENST00000569136 OS9Q13438 667 aaPredicted RBP11.31□□□□□ -0.6
CAPN3-219ENST00000569136 DEFB115Q30KQ5 88 aa11.31□□□□□ -0.6
CAPN3-219ENST00000569136 GORABQ5T7V8 394 aa11.31□□□□□ -0.6
CAPN3-219ENST00000569136 CST9Q5W186 159 aa11.31□□□□□ -0.6
CAPN3-219ENST00000569136 CERS5Q8N5B7 392 aa11.31□□□□□ -0.6
CAPN3-219ENST00000569136 ZBED3Q96IU2 234 aaPredicted RBP11.31□□□□□ -0.6
CAPN3-219ENST00000569136 PRKD2Q9BZL6 878 aa11.31□□□□□ -0.6
CAPN3-219ENST00000569136 PRM3Q9NNZ6 103 aa11.31□□□□□ -0.6
CAPN3-219ENST00000569136 COG6Q9Y2V7 657 aa11.31□□□□□ -0.6
CAPN3-219ENST00000569136 LRRC37AA6NMS7 1700 aa11.31□□□□□ -0.6
CAPN3-219ENST00000569136 TAF1P21675 1872 aa11.31□□□□□ -0.6
CAPN3-219ENST00000569136 TRAF5O00463 557 aa11.3□□□□□ -0.6
CAPN3-219ENST00000569136 CHAF1AQ13111 956 aaPredicted RBP11.3□□□□□ -0.6
CAPN3-219ENST00000569136 NBPF9Q3BBW0 867 aa11.3□□□□□ -0.6
CAPN3-219ENST00000569136 LINC01559Q495D7 138 aa11.3□□□□□ -0.6
CAPN3-219ENST00000569136 ANGEL2Q5VTE6 544 aaKnown RBP11.3□□□□□ -0.6
CAPN3-219ENST00000569136 CEP85Q6P2H3 762 aa11.3□□□□□ -0.6
CAPN3-219ENST00000569136 LIAT1Q6ZQX7 453 aa11.3□□□□□ -0.6
CAPN3-219ENST00000569136 ERC1Q8IUD2 1116 aa11.3□□□□□ -0.6
CAPN3-219ENST00000569136 ZGPATQ8N5A5 531 aaKnown RBP11.3□□□□□ -0.6
CAPN3-219ENST00000569136 C2orf69Q8N8R5 385 aa11.3□□□□□ -0.6
CAPN3-219ENST00000569136 PNMA1Q8ND90 353 aa11.3□□□□□ -0.6
CAPN3-219ENST00000569136 HHIPL1Q96JK4 782 aa11.3□□□□□ -0.6
CAPN3-219ENST00000569136 NEUROD6Q96NK8 337 aa11.3□□□□□ -0.6
CAPN3-219ENST00000569136 ABT1Q9ULW3 272 aaKnown RBP11.3□□□□□ -0.6
CAPN3-219ENST00000569136 TTF2Q9UNY4 1162 aaKnown RBP11.3□□□□□ -0.6
CAPN3-219ENST00000569136 MAST3O60307 1309 aa11.3□□□□□ -0.6
CAPN3-219ENST00000569136 A0A1B0GUL7 405 aa11.29□□□□□ -0.6
CAPN3-219ENST00000569136 RASSF10A6NK89 507 aa11.29□□□□□ -0.6
CAPN3-219ENST00000569136 CD2BP2O95400 341 aaKnown RBP11.29□□□□□ -0.6
CAPN3-219ENST00000569136 ECE1P42892 770 aa11.29□□□□□ -0.6
CAPN3-219ENST00000569136 RBM5P52756 815 aaKnown RBP eCLIP11.29□□□□□ -0.6
CAPN3-219ENST00000569136 FKBP1BP68106 108 aa11.29□□□□□ -0.6
CAPN3-219ENST00000569136 HTRA3P83110 453 aa11.29□□□□□ -0.6
CAPN3-219ENST00000569136 CFAP100Q494V2 611 aa11.29□□□□□ -0.6
CAPN3-219ENST00000569136 CCDC102BQ68D86 513 aa11.29□□□□□ -0.6
CAPN3-219ENST00000569136 APOBEC3FQ8IUX4 373 aaKnown RBP11.29□□□□□ -0.6
CAPN3-219ENST00000569136 JMYQ8N9B5 988 aa11.29□□□□□ -0.6
CAPN3-219ENST00000569136 XAGE2Q96GT9 111 aa11.29□□□□□ -0.6
CAPN3-219ENST00000569136 YTHDC1Q96MU7 727 aaKnown RBP11.29□□□□□ -0.6
CAPN3-219ENST00000569136 C1orf115Q9H7X2 142 aa11.29□□□□□ -0.6
CAPN3-219ENST00000569136 GGA3Q9NZ52 723 aa11.29□□□□□ -0.6
CAPN3-219ENST00000569136 TLL2Q9Y6L7 1015 aa11.29□□□□□ -0.6
CAPN3-219ENST00000569136 CACNA1SQ13698 1873 aa11.29□□□□□ -0.6
CAPN3-219ENST00000569136 F8W031 263 aaPredicted RBP11.28□□□□□ -0.6
CAPN3-219ENST00000569136 IGSF3O75054 1194 aa11.28□□□□□ -0.6
CAPN3-219ENST00000569136 UQCRFS1P1P0C7P4 283 aa11.28□□□□□ -0.6
CAPN3-219ENST00000569136 NF2P35240 595 aa11.28□□□□□ -0.6
CAPN3-219ENST00000569136 RPIAP49247 311 aa11.28□□□□□ -0.6
CAPN3-219ENST00000569136 TRIM32Q13049 653 aa11.28□□□□□ -0.6
CAPN3-219ENST00000569136 CCDC158Q5M9N0 1113 aa11.28□□□□□ -0.6
CAPN3-219ENST00000569136 SPTY2D1Q68D10 685 aaPredicted RBP11.28□□□□□ -0.6
CAPN3-219ENST00000569136 HHIPL2Q6UWX4 724 aa11.28□□□□□ -0.6
CAPN3-219ENST00000569136 ARMC2Q8NEN0 867 aa11.28□□□□□ -0.6
CAPN3-219ENST00000569136 BAP1Q92560 729 aa11.28□□□□□ -0.6
CAPN3-219ENST00000569136 TEKT1Q969V4 418 aa11.28□□□□□ -0.6
CAPN3-219ENST00000569136 PRMT6Q96LA8 375 aaPredicted RBP11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms