RNA–Protein interactions for RNA: ENST00000569128.1

CDH11-216, Transcript of cadherin 11, humanhuman

TSL 3

Gene CDH11, Length 781 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-216ENST00000569128 OXCT2Q9BYC2 517 aaPredicted RBP10.58□□□□□ -0.72
CDH11-216ENST00000569128 C12orf49Q9H741 205 aa10.58□□□□□ -0.72
CDH11-216ENST00000569128 NPHP3Q7Z494 1330 aa10.58□□□□□ -0.72
CDH11-216ENST00000569128 ROBO1Q9Y6N7 1651 aa10.57□□□□□ -0.72
CDH11-216ENST00000569128 PXDNQ92626 1479 aa10.57□□□□□ -0.72
CDH11-216ENST00000569128 PARD3Q8TEW0 1356 aa10.57□□□□□ -0.72
CDH11-216ENST00000569128 GIPC1O14908 333 aa10.57□□□□□ -0.72
CDH11-216ENST00000569128 GHRHP01286 108 aa10.57□□□□□ -0.72
CDH11-216ENST00000569128 ATP11AP98196 1134 aa10.57□□□□□ -0.72
CDH11-216ENST00000569128 DZANK1Q9NVP4 752 aa10.57□□□□□ -0.72
CDH11-216ENST00000569128 TTC21AQ8NDW8 1320 aa10.57□□□□□ -0.72
CDH11-216ENST00000569128 KIF20BQ96Q89 1820 aa10.56□□□□□ -0.72
CDH11-216ENST00000569128 TRPM3Q9HCF6 1732 aaPredicted RBP10.56□□□□□ -0.72
CDH11-216ENST00000569128 ADARB2-AS1A8MUL3 147 aa10.56□□□□□ -0.72
CDH11-216ENST00000569128 ADAMTS2O95450 1211 aa10.56□□□□□ -0.72
CDH11-216ENST00000569128 PPP2R1AP30153 589 aa10.56□□□□□ -0.72
CDH11-216ENST00000569128 RALBP1Q15311 655 aa10.56□□□□□ -0.72
CDH11-216ENST00000569128 GOLGA6L1Q8N7Z2 621 aa10.56□□□□□ -0.72
CDH11-216ENST00000569128 HHIPQ96QV1 700 aa10.56□□□□□ -0.72
CDH11-216ENST00000569128 RASSF4Q9H2L5 321 aa10.56□□□□□ -0.72
CDH11-216ENST00000569128 LIN7BQ9HAP6 207 aa10.56□□□□□ -0.72
CDH11-216ENST00000569128 NAGPAQ9UK23 515 aa10.56□□□□□ -0.72
CDH11-216ENST00000569128 PIK3C2AO00443 1686 aa10.56□□□□□ -0.72
CDH11-216ENST00000569128 IQSEC2Q5JU85 1478 aa10.55□□□□□ -0.72
CDH11-216ENST00000569128 LCE2CQ5TA81 110 aa10.55□□□□□ -0.72
CDH11-216ENST00000569128 GLIS3Q8NEA6 775 aa10.55□□□□□ -0.72
CDH11-216ENST00000569128 ACDQ96AP0 544 aa10.55□□□□□ -0.72
CDH11-216ENST00000569128 COG3Q96JB2 828 aa10.55□□□□□ -0.72
CDH11-216ENST00000569128 MDFIQ99750 246 aa10.55□□□□□ -0.72
CDH11-216ENST00000569128 RBSNQ9H1K0 784 aa10.55□□□□□ -0.72
CDH11-216ENST00000569128 GDF2Q9UK05 429 aaPredicted RBP10.55□□□□□ -0.72
CDH11-216ENST00000569128 SPATA31A3Q5VYP0 1347 aa10.55□□□□□ -0.72
CDH11-216ENST00000569128 USP31Q70CQ4 1352 aa10.54□□□□□ -0.72
CDH11-216ENST00000569128 ELOA3CA0A087WX78 387 aaPredicted RBP10.54□□□□□ -0.72
CDH11-216ENST00000569128 OVOS2A0A0J9YW53 1432 aa10.54□□□□□ -0.72
CDH11-216ENST00000569128 ELOA3DA6NLF2 546 aaPredicted RBP10.54□□□□□ -0.72
CDH11-216ENST00000569128 CTSHP09668 335 aa10.54□□□□□ -0.72
CDH11-216ENST00000569128 ELOA3BQ3SY89 546 aa10.54□□□□□ -0.72
CDH11-216ENST00000569128 PERM1Q5SV97 790 aa10.54□□□□□ -0.72
CDH11-216ENST00000569128 LDLRAD1Q5T700 205 aa10.54□□□□□ -0.72
CDH11-216ENST00000569128 OVOS2Q6IE36 1432 aa10.54□□□□□ -0.72
CDH11-216ENST00000569128 SLCO4C1Q6ZQN7 724 aa10.54□□□□□ -0.72
CDH11-216ENST00000569128 ELOA3Q8NG57 546 aa10.54□□□□□ -0.72
CDH11-216ENST00000569128 TCF12Q99081 682 aa10.54□□□□□ -0.72
CDH11-216ENST00000569128 PBX4Q9BYU1 374 aa10.54□□□□□ -0.72
CDH11-216ENST00000569128 FAM8A1Q9UBU6 413 aa10.54□□□□□ -0.72
CDH11-216ENST00000569128 NHSL1Q5SYE7 1610 aa10.54□□□□□ -0.72
CDH11-216ENST00000569128 SBNO1A3KN83 1393 aa10.53□□□□□ -0.72
CDH11-216ENST00000569128 BRD4O60885 1362 aaPredicted RBP10.53□□□□□ -0.72
CDH11-216ENST00000569128 NSD2O96028 1365 aa10.53□□□□□ -0.72
CDH11-216ENST00000569128 NFKBIEO00221 500 aa10.53□□□□□ -0.72
CDH11-216ENST00000569128 USP17L7P0C7H9 530 aa10.53□□□□□ -0.72
CDH11-216ENST00000569128 NCLP19338 710 aaKnown RBP10.53□□□□□ -0.72
CDH11-216ENST00000569128 GMPRP36959 345 aa10.53□□□□□ -0.72
CDH11-216ENST00000569128 RAD51AP2Q09MP3 1159 aa10.53□□□□□ -0.72
CDH11-216ENST00000569128 RRS1Q15050 365 aaKnown RBP10.53□□□□□ -0.72
CDH11-216ENST00000569128 ELMSAN1Q6PJG2 1045 aa10.53□□□□□ -0.72
CDH11-216ENST00000569128 TMEM87AQ8NBN3 555 aa10.53□□□□□ -0.72
CDH11-216ENST00000569128 PLD4Q96BZ4 506 aa10.53□□□□□ -0.72
CDH11-216ENST00000569128 SRCIN1Q9C0H9 1055 aa10.53□□□□□ -0.72
CDH11-216ENST00000569128 PPP4R2Q9NY27 417 aa10.53□□□□□ -0.72
CDH11-216ENST00000569128 MYBBP1AQ9BQG0 1328 aaKnown RBP10.53□□□□□ -0.72
CDH11-216ENST00000569128 ANKRD26Q9UPS8 1709 aa10.53□□□□□ -0.72
CDH11-216ENST00000569128 MARF1Q9Y4F3 1742 aaKnown RBP10.53□□□□□ -0.72
CDH11-216ENST00000569128 TNS3Q68CZ2 1445 aa10.52□□□□□ -0.73
CDH11-216ENST00000569128 METTL12A8MUP2 240 aa10.52□□□□□ -0.73
CDH11-216ENST00000569128 PDE2AO00408 941 aaPredicted RBP10.52□□□□□ -0.73
CDH11-216ENST00000569128 WFS1O76024 890 aa10.52□□□□□ -0.73
CDH11-216ENST00000569128 FCGRTP55899 365 aa10.52□□□□□ -0.73
CDH11-216ENST00000569128 C1orf229Q6ZS94 237 aaPredicted RBP10.52□□□□□ -0.73
CDH11-216ENST00000569128 CCNJLQ8IV13 435 aa10.52□□□□□ -0.73
CDH11-216ENST00000569128 MICALL1Q8N3F8 863 aa10.52□□□□□ -0.73
CDH11-216ENST00000569128 SMG9Q9H0W8 520 aaKnown RBP10.52□□□□□ -0.73
CDH11-216ENST00000569128 ABCB6Q9NP58 842 aa10.52□□□□□ -0.73
CDH11-216ENST00000569128 ALS2Q96Q42 1657 aa10.52□□□□□ -0.73
CDH11-216ENST00000569128 EPXP11678 715 aa10.51□□□□□ -0.73
CDH11-216ENST00000569128 ALAS2P22557 587 aa10.51□□□□□ -0.73
CDH11-216ENST00000569128 MTHFSP49914 203 aa10.51□□□□□ -0.73
CDH11-216ENST00000569128 C9orf131Q5VYM1 1079 aa10.51□□□□□ -0.73
CDH11-216ENST00000569128 CEP135Q66GS9 1140 aa10.51□□□□□ -0.73
CDH11-216ENST00000569128 PSAPL1Q6NUJ1 521 aa10.51□□□□□ -0.73
CDH11-216ENST00000569128 PRPF40BQ6NWY9 871 aaKnown RBP10.51□□□□□ -0.73
CDH11-216ENST00000569128 TMEM102Q8N9M5 508 aaPredicted RBP10.51□□□□□ -0.73
CDH11-216ENST00000569128 NXPE3Q969Y0 559 aa10.51□□□□□ -0.73
CDH11-216ENST00000569128 ZNF775Q96BV0 537 aaPredicted RBP10.51□□□□□ -0.73
CDH11-216ENST00000569128 CRELD1Q96HD1 420 aa10.51□□□□□ -0.73
CDH11-216ENST00000569128 POP1Q99575 1024 aaKnown RBP10.51□□□□□ -0.73
CDH11-216ENST00000569128 POLKQ9UBT6 870 aa10.51□□□□□ -0.73
CDH11-216ENST00000569128 AHDC1Q5TGY3 1603 aaPredicted RBP10.51□□□□□ -0.73
CDH11-216ENST00000569128 TMEM238LA0A1B0GVL6 79 aa10.5□□□□□ -0.73
CDH11-216ENST00000569128 SMNDC1O75940 238 aaKnown RBP eCLIP10.5□□□□□ -0.73
CDH11-216ENST00000569128 GRIA4P48058 902 aa10.5□□□□□ -0.73
CDH11-216ENST00000569128 SPRED3Q2MJR0 410 aa10.5□□□□□ -0.73
CDH11-216ENST00000569128 ASAP3Q8TDY4 903 aa10.5□□□□□ -0.73
CDH11-216ENST00000569128 NUDT8Q8WV74 236 aa10.5□□□□□ -0.73
CDH11-216ENST00000569128 LPIN3Q9BQK8 851 aa10.5□□□□□ -0.73
CDH11-216ENST00000569128 METTL5Q9NRN9 209 aaKnown RBP10.5□□□□□ -0.73
CDH11-216ENST00000569128 MED1Q15648 1581 aaPredicted RBP10.5□□□□□ -0.73
CDH11-216ENST00000569128 PHLPP1O60346 1717 aa10.5□□□□□ -0.73
CDH11-216ENST00000569128 CCER2I3L3R5 266 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms