RNA–Protein interactions for RNA: ENST00000568770.5

CDH13-211, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-211ENST00000568770 BRIP1Q9BX63 1249 aa7.65□□□□□ -1.18
CDH13-211ENST00000568770 ZCCHC2Q9C0B9 1178 aaKnown RBP7.65□□□□□ -1.18
CDH13-211ENST00000568770 LTBP3Q9NS15 1303 aa7.65□□□□□ -1.18
CDH13-211ENST00000568770 CASP8AP2Q9UKL3 1982 aa7.64□□□□□ -1.19
CDH13-211ENST00000568770 AKAP4Q5JQC9 854 aa7.64□□□□□ -1.19
CDH13-211ENST00000568770 PRR5LQ6MZQ0 368 aa7.64□□□□□ -1.19
CDH13-211ENST00000568770 PGBD3Q8N328 593 aa7.64□□□□□ -1.19
CDH13-211ENST00000568770 GPR161Q8N6U8 529 aaKnown RBP7.64□□□□□ -1.19
CDH13-211ENST00000568770 CCER1Q8TC90 406 aaPredicted RBP7.64□□□□□ -1.19
CDH13-211ENST00000568770 POLR3GLQ9BT43 218 aa7.64□□□□□ -1.19
CDH13-211ENST00000568770 NUCKS1Q9H1E3 243 aaKnown RBP7.64□□□□□ -1.19
CDH13-211ENST00000568770 TAF1DQ9H5J8 278 aaPredicted RBP7.64□□□□□ -1.19
CDH13-211ENST00000568770 THSD7BQ9C0I4 1608 aa7.63□□□□□ -1.19
CDH13-211ENST00000568770 SOWAHDA6NJG2 315 aa7.63□□□□□ -1.19
CDH13-211ENST00000568770 ICMTO60725 284 aa7.63□□□□□ -1.19
CDH13-211ENST00000568770 HSPA8P11142 646 aaKnown RBP7.63□□□□□ -1.19
CDH13-211ENST00000568770 MPSTP25325 297 aa7.63□□□□□ -1.19
CDH13-211ENST00000568770 EIF5P55010 431 aaKnown RBP7.63□□□□□ -1.19
CDH13-211ENST00000568770 FKBP4Q02790 459 aaKnown RBP eCLIP7.63□□□□□ -1.19
CDH13-211ENST00000568770 DEFB115Q30KQ5 88 aa7.63□□□□□ -1.19
CDH13-211ENST00000568770 EAPPQ56P03 285 aaPredicted RBP7.63□□□□□ -1.19
CDH13-211ENST00000568770 LCE2CQ5TA81 110 aa7.63□□□□□ -1.19
CDH13-211ENST00000568770 PRPF40BQ6NWY9 871 aaKnown RBP7.63□□□□□ -1.19
CDH13-211ENST00000568770 GTPBP3Q969Y2 492 aaKnown RBP7.63□□□□□ -1.19
CDH13-211ENST00000568770 STIM2Q9P246 746 aa7.63□□□□□ -1.19
CDH13-211ENST00000568770 WDR33Q9C0J8 1336 aaKnown RBP7.62□□□□□ -1.19
CDH13-211ENST00000568770 A0A087WZG4 1122 aa7.62□□□□□ -1.19
CDH13-211ENST00000568770 CDC14CA4D256 554 aa7.62□□□□□ -1.19
CDH13-211ENST00000568770 RASSF10A6NK89 507 aa7.62□□□□□ -1.19
CDH13-211ENST00000568770 H3BM21 787 aa7.62□□□□□ -1.19
CDH13-211ENST00000568770 GPR25O00155 361 aa7.62□□□□□ -1.19
CDH13-211ENST00000568770 OPLAHO14841 1288 aa7.62□□□□□ -1.19
CDH13-211ENST00000568770 RNMTO43148 476 aaKnown RBP7.62□□□□□ -1.19
CDH13-211ENST00000568770 BNIP3LO60238 219 aa7.62□□□□□ -1.19
CDH13-211ENST00000568770 SRGNP10124 158 aa7.62□□□□□ -1.19
CDH13-211ENST00000568770 GRNP28799 593 aaKnown RBP7.62□□□□□ -1.19
CDH13-211ENST00000568770 IL13P35225 146 aa7.62□□□□□ -1.19
CDH13-211ENST00000568770 MAP2K1Q02750 393 aaPredicted RBP7.62□□□□□ -1.19
CDH13-211ENST00000568770 MLLT1Q03111 559 aaPredicted RBP7.62□□□□□ -1.19
CDH13-211ENST00000568770 STYK1Q6J9G0 422 aa7.62□□□□□ -1.19
CDH13-211ENST00000568770 NLRP8Q86W28 1048 aa7.62□□□□□ -1.19
CDH13-211ENST00000568770 ATCAYQ86WG3 371 aa7.62□□□□□ -1.19
CDH13-211ENST00000568770 NANOS1Q8WY41 292 aaKnown RBP7.62□□□□□ -1.19
CDH13-211ENST00000568770 MTMR7Q9Y216 660 aa7.62□□□□□ -1.19
CDH13-211ENST00000568770 USP20Q9Y2K6 914 aa7.62□□□□□ -1.19
CDH13-211ENST00000568770 GPC6Q9Y625 555 aaPredicted RBP7.62□□□□□ -1.19
CDH13-211ENST00000568770 LTBP1Q14766 1721 aa7.61□□□□□ -1.19
CDH13-211ENST00000568770 PDE4DIPQ5VU43 2346 aa7.61□□□□□ -1.19
CDH13-211ENST00000568770 ERBB4Q15303 1308 aa7.61□□□□□ -1.19
CDH13-211ENST00000568770 ZNF541Q9H0D2 1346 aa7.61□□□□□ -1.19
CDH13-211ENST00000568770 CCDC85CA6NKD9 419 aa7.61□□□□□ -1.19
CDH13-211ENST00000568770 H3BRB1 525 aa7.61□□□□□ -1.19
CDH13-211ENST00000568770 TGFBR3LH3BV60 316 aa7.61□□□□□ -1.19
CDH13-211ENST00000568770 H7C1W4 665 aa7.61□□□□□ -1.19
CDH13-211ENST00000568770 TERTO14746 1132 aaKnown RBP7.61□□□□□ -1.19
CDH13-211ENST00000568770 NPHP1O15259 732 aa7.61□□□□□ -1.19
CDH13-211ENST00000568770 MICAL2O94851 1124 aa7.61□□□□□ -1.19
CDH13-211ENST00000568770 STARD3NLO95772 234 aa7.61□□□□□ -1.19
CDH13-211ENST00000568770 NPR3P17342 541 aa7.61□□□□□ -1.19
CDH13-211ENST00000568770 BRD2P25440 801 aaKnown RBP7.61□□□□□ -1.19
CDH13-211ENST00000568770 EPHX2P34913 555 aa7.61□□□□□ -1.19
CDH13-211ENST00000568770 GRIN2CQ14957 1233 aa7.61□□□□□ -1.19
CDH13-211ENST00000568770 EFHC2Q5JST6 749 aa7.61□□□□□ -1.19
CDH13-211ENST00000568770 SOGA3Q5TF21 947 aa7.61□□□□□ -1.19
CDH13-211ENST00000568770 MAP1SQ66K74 1059 aaPredicted RBP7.61□□□□□ -1.19
CDH13-211ENST00000568770 BTLAQ7Z6A9 289 aa7.61□□□□□ -1.19
CDH13-211ENST00000568770 MORC1Q86VD1 984 aa7.61□□□□□ -1.19
CDH13-211ENST00000568770 TREML1Q86YW5 311 aa7.61□□□□□ -1.19
CDH13-211ENST00000568770 CNTROBQ8N137 903 aa7.61□□□□□ -1.19
CDH13-211ENST00000568770 CNBD1Q8NA66 436 aa7.61□□□□□ -1.19
CDH13-211ENST00000568770 MASTLQ96GX5 879 aa7.61□□□□□ -1.19
CDH13-211ENST00000568770 SETDB2Q96T68 719 aa7.61□□□□□ -1.19
CDH13-211ENST00000568770 GZF1Q9H116 711 aaPredicted RBP7.61□□□□□ -1.19
CDH13-211ENST00000568770 TUT1Q9H6E5 874 aaKnown RBP7.61□□□□□ -1.19
CDH13-211ENST00000568770 PANK3Q9H999 370 aa7.61□□□□□ -1.19
CDH13-211ENST00000568770 NEUROD4Q9HD90 331 aa7.61□□□□□ -1.19
CDH13-211ENST00000568770 NDFIP2Q9NV92 336 aa7.61□□□□□ -1.19
CDH13-211ENST00000568770 EGFL7Q9UHF1 273 aa7.61□□□□□ -1.19
CDH13-211ENST00000568770 HACL1Q9UJ83 578 aa7.61□□□□□ -1.19
CDH13-211ENST00000568770 ABT1Q9ULW3 272 aaKnown RBP7.61□□□□□ -1.19
CDH13-211ENST00000568770 RNF123Q5XPI4 1314 aa7.6□□□□□ -1.19
CDH13-211ENST00000568770 HMOX1P09601 288 aa7.6□□□□□ -1.19
CDH13-211ENST00000568770 RGS19P49795 217 aa7.6□□□□□ -1.19
CDH13-211ENST00000568770 ST5P78524 1137 aa7.6□□□□□ -1.19
CDH13-211ENST00000568770 ARHGAP4P98171 946 aa7.6□□□□□ -1.19
CDH13-211ENST00000568770 LBRQ14739 615 aaKnown RBP7.6□□□□□ -1.19
CDH13-211ENST00000568770 MTHFSDQ2M296 383 aaKnown RBP7.6□□□□□ -1.19
CDH13-211ENST00000568770 PNMA8AQ86V59 439 aaPredicted RBP7.6□□□□□ -1.19
CDH13-211ENST00000568770 TTC5Q8N0Z6 440 aa7.6□□□□□ -1.19
CDH13-211ENST00000568770 ZNF775Q96BV0 537 aaPredicted RBP7.6□□□□□ -1.19
CDH13-211ENST00000568770 ABHD17AQ96GS6 310 aa7.6□□□□□ -1.19
CDH13-211ENST00000568770 ZNF277Q9NRM2 450 aaPredicted RBP7.6□□□□□ -1.19
CDH13-211ENST00000568770 ANKIB1Q9P2G1 1089 aa7.6□□□□□ -1.19
CDH13-211ENST00000568770 PCDHGC4Q9Y5F7 938 aa7.6□□□□□ -1.19
CDH13-211ENST00000568770 GJA3Q9Y6H8 435 aa7.6□□□□□ -1.19
CDH13-211ENST00000568770 DCDC2BA2VCK2 349 aa7.59□□□□□ -1.19
CDH13-211ENST00000568770 ATXN7O15265 892 aaPredicted RBP7.59□□□□□ -1.19
CDH13-211ENST00000568770 INPP5BP32019 993 aa7.59□□□□□ -1.19
CDH13-211ENST00000568770 IL6STP40189 918 aaPredicted RBP7.59□□□□□ -1.19
CDH13-211ENST00000568770 EIF1AXP47813 144 aaKnown RBP7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms