RNA–Protein interactions for RNA: ENST00000568744.1

CYLD-213, Transcript of CYLD lysine 63 deubiquitinase, humanhuman

TSL 2

Gene CYLD, Length 370 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYLD-213ENST00000568744 LGR6Q9HBX8 967 aa9.08□□□□□ -0.96
CYLD-213ENST00000568744 FAM105AQ9NUU6 356 aa9.08□□□□□ -0.96
CYLD-213ENST00000568744 POLR3KQ9Y2Y1 108 aaPredicted RBP9.08□□□□□ -0.96
CYLD-213ENST00000568744 PGRP06401 933 aa9.07□□□□□ -0.96
CYLD-213ENST00000568744 ATF4P18848 351 aaPredicted RBP9.07□□□□□ -0.96
CYLD-213ENST00000568744 PLCG1P19174 1290 aa9.07□□□□□ -0.96
CYLD-213ENST00000568744 SGO2Q562F6 1265 aa9.07□□□□□ -0.96
CYLD-213ENST00000568744 ZBTB37Q5TC79 503 aa9.07□□□□□ -0.96
CYLD-213ENST00000568744 CCDC81Q6ZN84 652 aa9.07□□□□□ -0.96
CYLD-213ENST00000568744 Q6ZS46 218 aa9.07□□□□□ -0.96
CYLD-213ENST00000568744 RNF214Q8ND24 703 aa9.07□□□□□ -0.96
CYLD-213ENST00000568744 FBLIM1Q8WUP2 373 aa9.07□□□□□ -0.96
CYLD-213ENST00000568744 YIPF2Q9BWQ6 316 aa9.07□□□□□ -0.96
CYLD-213ENST00000568744 PPT2Q9UMR5 302 aa9.07□□□□□ -0.96
CYLD-213ENST00000568744 DAGLAQ9Y4D2 1042 aa9.07□□□□□ -0.96
CYLD-213ENST00000568744 SSBP05455 408 aaKnown RBP eCLIP9.06□□□□□ -0.96
CYLD-213ENST00000568744 BMP3P12645 472 aa9.06□□□□□ -0.96
CYLD-213ENST00000568744 CLCQ05315 142 aa9.06□□□□□ -0.96
CYLD-213ENST00000568744 CDPF1Q6NVV7 123 aa9.06□□□□□ -0.96
CYLD-213ENST00000568744 FAM46AQ96IP4 442 aaKnown RBP9.06□□□□□ -0.96
CYLD-213ENST00000568744 SEC16BQ96JE7 1060 aa9.06□□□□□ -0.96
CYLD-213ENST00000568744 WNT10AQ9GZT5 417 aa9.06□□□□□ -0.96
CYLD-213ENST00000568744 PRKAG2Q9UGJ0 569 aa9.06□□□□□ -0.96
CYLD-213ENST00000568744 FANCGO15287 622 aa9.05□□□□□ -0.96
CYLD-213ENST00000568744 NEFMP07197 916 aa9.05□□□□□ -0.96
CYLD-213ENST00000568744 COL9A2Q14055 689 aaPredicted RBP9.05□□□□□ -0.96
CYLD-213ENST00000568744 MLECQ14165 292 aa9.05□□□□□ -0.96
CYLD-213ENST00000568744 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.05□□□□□ -0.96
CYLD-213ENST00000568744 SMYD4Q8IYR2 804 aaPredicted RBP9.05□□□□□ -0.96
CYLD-213ENST00000568744 DZIP1LQ8IYY4 767 aaKnown RBP9.05□□□□□ -0.96
CYLD-213ENST00000568744 ZNF507Q8TCN5 953 aa9.05□□□□□ -0.96
CYLD-213ENST00000568744 USP35Q9P2H5 1018 aa9.05□□□□□ -0.96
CYLD-213ENST00000568744 KLHL3Q9UH77 587 aa9.05□□□□□ -0.96
CYLD-213ENST00000568744 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.04□□□□□ -0.96
CYLD-213ENST00000568744 HTR3BO95264 441 aa9.04□□□□□ -0.96
CYLD-213ENST00000568744 NFICP08651 508 aa9.04□□□□□ -0.96
CYLD-213ENST00000568744 RING1Q06587 406 aa9.04□□□□□ -0.96
CYLD-213ENST00000568744 SF3A1Q15459 793 aaKnown RBP9.04□□□□□ -0.96
CYLD-213ENST00000568744 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.04□□□□□ -0.96
CYLD-213ENST00000568744 SREK1Q8WXA9 508 aaKnown RBP9.04□□□□□ -0.96
CYLD-213ENST00000568744 ISL2Q96A47 359 aa9.04□□□□□ -0.96
CYLD-213ENST00000568744 TP53INP1Q96A56 240 aa9.04□□□□□ -0.96
CYLD-213ENST00000568744 CRBNQ96SW2 442 aa9.04□□□□□ -0.96
CYLD-213ENST00000568744 REV1Q9UBZ9 1251 aa9.04□□□□□ -0.96
CYLD-213ENST00000568744 ATP2B1P20020 1258 aa9.03□□□□□ -0.96
CYLD-213ENST00000568744 MAP4P27816 1152 aaKnown RBP9.03□□□□□ -0.96
CYLD-213ENST00000568744 SOX9P48436 509 aa9.03□□□□□ -0.96
CYLD-213ENST00000568744 NFKBIBQ15653 356 aa9.03□□□□□ -0.96
CYLD-213ENST00000568744 UVSSAQ2YD98 709 aa9.03□□□□□ -0.96
CYLD-213ENST00000568744 PLA2G4EQ3MJ16 856 aa9.03□□□□□ -0.96
CYLD-213ENST00000568744 REXO1Q8N1G1 1221 aaKnown RBP9.03□□□□□ -0.96
CYLD-213ENST00000568744 ARMC10Q8N2F6 343 aa9.03□□□□□ -0.96
CYLD-213ENST00000568744 MYRFLQ96LU7 910 aa9.03□□□□□ -0.96
CYLD-213ENST00000568744 SRRTQ9BXP5 876 aaKnown RBP9.03□□□□□ -0.96
CYLD-213ENST00000568744 GSX1Q9H4S2 264 aaPredicted RBP9.03□□□□□ -0.96
CYLD-213ENST00000568744 PCOLCE2Q9UKZ9 415 aa9.03□□□□□ -0.96
CYLD-213ENST00000568744 TACC3Q9Y6A5 838 aa9.03□□□□□ -0.96
CYLD-213ENST00000568744 DHX15O43143 795 aaKnown RBP9.02□□□□□ -0.97
CYLD-213ENST00000568744 GSK3AP49840 483 aa9.02□□□□□ -0.97
CYLD-213ENST00000568744 UBE3DQ7Z6J8 389 aa9.02□□□□□ -0.97
CYLD-213ENST00000568744 HID1Q8IV36 788 aa9.02□□□□□ -0.97
CYLD-213ENST00000568744 FAM20CQ8IXL6 584 aa9.02□□□□□ -0.97
CYLD-213ENST00000568744 KCT2Q8NC54 265 aa9.02□□□□□ -0.97
CYLD-213ENST00000568744 ANAPC16Q96DE5 110 aa9.02□□□□□ -0.97
CYLD-213ENST00000568744 ACSS3Q9H6R3 686 aa9.02□□□□□ -0.97
CYLD-213ENST00000568744 MRVI1Q9Y6F6 885 aa9.02□□□□□ -0.97
CYLD-213ENST00000568744 NTF4P34130 210 aa9.01□□□□□ -0.97
CYLD-213ENST00000568744 GTF2F1P35269 517 aaKnown RBP eCLIP9.01□□□□□ -0.97
CYLD-213ENST00000568744 EIF6P56537 245 aaKnown RBP9.01□□□□□ -0.97
CYLD-213ENST00000568744 BEND4Q6ZU67 534 aa9.01□□□□□ -0.97
CYLD-213ENST00000568744 MCF2L2Q86YR7 1114 aa9.01□□□□□ -0.97
CYLD-213ENST00000568744 FAM13CQ8NE31 585 aa9.01□□□□□ -0.97
CYLD-213ENST00000568744 SEMA6CQ9H3T2 930 aa9.01□□□□□ -0.97
CYLD-213ENST00000568744 FBRSQ9HAH7 460 aa9.01□□□□□ -0.97
CYLD-213ENST00000568744 FAM95CA0A1B0GW59 222 aa9□□□□□ -0.97
CYLD-213ENST00000568744 FGRP09769 529 aa9□□□□□ -0.97
CYLD-213ENST00000568744 IMPDH2P12268 514 aa9□□□□□ -0.97
CYLD-213ENST00000568744 MAP7Q14244 749 aa9□□□□□ -0.97
CYLD-213ENST00000568744 ACSF2Q96CM8 615 aaPredicted RBP9□□□□□ -0.97
CYLD-213ENST00000568744 DRC1Q96MC2 740 aa9□□□□□ -0.97
CYLD-213ENST00000568744 GMLQ99445 158 aa9□□□□□ -0.97
CYLD-213ENST00000568744 DPH2Q9BQC3 489 aaPredicted RBP9□□□□□ -0.97
CYLD-213ENST00000568744 ANTXR1Q9H6X2 564 aa9□□□□□ -0.97
CYLD-213ENST00000568744 EHMT1Q9H9B1 1298 aa9□□□□□ -0.97
CYLD-213ENST00000568744 TJP2Q9UDY2 1190 aa9□□□□□ -0.97
CYLD-213ENST00000568744 ADAM30Q9UKF2 790 aa9□□□□□ -0.97
CYLD-213ENST00000568744 STRIP2Q9ULQ0 834 aa9□□□□□ -0.97
CYLD-213ENST00000568744 UPK3BL1B0FP48 263 aa8.99□□□□□ -0.97
CYLD-213ENST00000568744 UPK3BL2E5RIL1 263 aa8.99□□□□□ -0.97
CYLD-213ENST00000568744 NKG7Q16617 165 aa8.99□□□□□ -0.97
CYLD-213ENST00000568744 PAOXQ6QHF9 649 aa8.99□□□□□ -0.97
CYLD-213ENST00000568744 XAGE3Q8WTP9 111 aa8.99□□□□□ -0.97
CYLD-213ENST00000568744 DHX38Q92620 1227 aaKnown RBP8.99□□□□□ -0.97
CYLD-213ENST00000568744 TMEM87BQ96K49 555 aa8.99□□□□□ -0.97
CYLD-213ENST00000568744 SSBP4Q9BWG4 385 aaPredicted RBP8.99□□□□□ -0.97
CYLD-213ENST00000568744 ZNRF3Q9ULT6 936 aa8.99□□□□□ -0.97
CYLD-213ENST00000568744 PRR36Q9H6K5 1346 aa8.99□□□□□ -0.97
CYLD-213ENST00000568744 CHURC1-FNTBB4DL54 471 aa8.98□□□□□ -0.97
CYLD-213ENST00000568744 STK10O94804 968 aaKnown RBP8.98□□□□□ -0.97
CYLD-213ENST00000568744 ATE1O95260 518 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms